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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
13141 O_BomoEE21828_complete:A_BomoEE_comp70261_c0_seq15
960bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_huntingtin-interacting_protein_1_[Bombyx_mori]
GO:0003779 F actin binding
GO:0005200 F structural constituent of cytoskeleton
GO:0005515 F protein binding
GO:0005543 F phospholipid binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006897 P endocytosis
GO:0006915 P apoptotic process
GO:0006919 P activation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0030136 C clathrin-coated vesicle
GO:0030154 P cell differentiation
GO:0030276 F clathrin binding
GO:0030665 C clathrin-coated vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0035091 F phosphatidylinositol binding
GO:0042981 P regulation of apoptotic process
GO:0043231 C intracellular membrane-bounded organelle
GO:0048260 P positive regulation of receptor-mediated endocytosis
GO:0048268 P clathrin coat assembly
GO:0072583 P clathrin-dependent endocytosis
GO:0097190 P apoptotic signaling pathway
13142 O_BomoEE21829_3prime_partial:A_BomoEE_comp70261_c0_seq15
225bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_huntingtin-interacting_protein_1_[Bombyx_mori]
13143 O_BomoEE2182_complete:A_BomoEE_comp33599_c0_seq1
1769bp
 PREDICTED:_uncharacterized_protein_LOC101738424_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006606 P protein import into nucleus
GO:0007049 P cell cycle
GO:0008270 F zinc ion binding
GO:0008285 P negative regulation of cell population proliferation
GO:0010941 P regulation of cell death
GO:0016568 P chromatin organization
GO:0035064 F methylated histone binding
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
13144 O_BomoEE21830_complete:A_BomoEE_comp70261_c0_seq15
143bp
13145 O_BomoEE21831_complete:A_BomoEE_comp70262_c0_seq1
212bp
 nascent_polypeptide_associated_complex_protein_alpha_subunit_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005854 C nascent polypeptide-associated complex
GO:0006810 P transport
GO:0007275 P multicellular organism development
GO:0015031 P protein transport
GO:0022008 P neurogenesis
GO:0048477 P oogenesis
13146 O_BomoEE21832_5prime_partial:A_BomoEE_comp70262_c0_seq1
111bp
13147 O_BomoEE21833_complete:A_BomoEE_comp70262_c0_seq1
104bp
 hypothetical_protein_ALC57_01051_[Trachymyrmex_cornetzi]
13148 O_BomoEE21834_complete:A_BomoEE_comp70262_c0_seq2
212bp
 nascent_polypeptide_associated_complex_protein_alpha_subunit_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005854 C nascent polypeptide-associated complex
GO:0006810 P transport
GO:0007275 P multicellular organism development
GO:0015031 P protein transport
GO:0022008 P neurogenesis
GO:0048477 P oogenesis
13149 O_BomoEE21835_5prime_partial:A_BomoEE_comp70262_c0_seq2
111bp
13150 O_BomoEE21836_complete:A_BomoEE_comp70262_c0_seq2
104bp
 hypothetical_protein_ALC57_01051_[Trachymyrmex_cornetzi]
13151 O_BomoEE21837_complete:A_BomoEE_comp70263_c0_seq2
723bp
 PREDICTED:_WD_repeat-containing_protein_59_isoform_X2_[Bombyx_mori]
GO:0032008 P positive regulation of TOR signaling
GO:0034198 P cellular response to amino acid starvation
GO:0061700 C GATOR2 complex
13152 O_BomoEE21838_3prime_partial:A_BomoEE_comp70263_c0_seq3
880bp
 PREDICTED:_WD_repeat-containing_protein_59_isoform_X3_[Bombyx_mori]
GO:0032008 P positive regulation of TOR signaling
GO:0034198 P cellular response to amino acid starvation
GO:0061700 C GATOR2 complex
13153 O_BomoEE21839_complete:A_BomoEE_comp70263_c0_seq4
655bp
 PREDICTED:_WD_repeat-containing_protein_59_isoform_X3_[Bombyx_mori]
GO:0032008 P positive regulation of TOR signaling
GO:0034198 P cellular response to amino acid starvation
GO:0061700 C GATOR2 complex
13154 O_BomoEE2183_complete:A_BomoEE_comp33599_c0_seq1
119bp
13155 O_BomoEE21840_3prime_partial:A_BomoEE_comp70263_c0_seq6
228bp
 PREDICTED:_WD_repeat-containing_protein_59_isoform_X3_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0032008 P positive regulation of TOR signaling
GO:0034198 P cellular response to amino acid starvation
GO:0035859 C Seh1-associated complex
13156 O_BomoEE21841_complete:A_BomoEE_comp70264_c0_seq1
101bp
 PREDICTED:_tRNA_dimethylallyltransferase,_mitochondrial-like_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006400 P tRNA modification
GO:0008033 P tRNA processing
GO:0016740 F transferase activity
GO:0046872 F metal ion binding
GO:0052381 F tRNA dimethylallyltransferase activity
13157 O_BomoEE21842_complete:A_BomoEE_comp70264_c0_seq4
483bp
 PREDICTED:_tRNA_dimethylallyltransferase,_mitochondrial_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006400 P tRNA modification
GO:0008033 P tRNA processing
GO:0016740 F transferase activity
GO:0046872 F metal ion binding
GO:0052381 F tRNA dimethylallyltransferase activity
13158 O_BomoEE21843_complete:A_BomoEE_comp70264_c0_seq6
494bp
 PREDICTED:_tRNA_dimethylallyltransferase,_mitochondrial_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006400 P tRNA modification
GO:0008033 P tRNA processing
GO:0016740 F transferase activity
GO:0046872 F metal ion binding
GO:0052381 F tRNA dimethylallyltransferase activity
13159 O_BomoEE21844_complete:A_BomoEE_comp70265_c0_seq2
305bp
 hypothetical_protein_KGM_01097_[Danaus_plexippus]
GO:0000175 F 3'-5'-exoribonuclease activity
GO:0000287 F magnesium ion binding
GO:0004518 F nuclease activity
GO:0004527 F exonuclease activity
GO:0005737 C cytoplasm
GO:0006259 P DNA metabolic process
GO:0008310 F single-stranded DNA 3'-5' exodeoxyribonuclease activity
GO:0008408 F 3'-5' exonuclease activity
GO:0016787 F hydrolase activity
GO:0016788 F hydrolase activity, acting on ester bonds
GO:0016888 F endodeoxyribonuclease activity, producing 5'-phosphomonoesters
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090503 P RNA phosphodiester bond hydrolysis, exonucleolytic
13160 O_BomoEE21845_complete:A_BomoEE_comp70265_c0_seq4
305bp
 hypothetical_protein_KGM_01097_[Danaus_plexippus]
GO:0000175 F 3'-5'-exoribonuclease activity
GO:0000287 F magnesium ion binding
GO:0004518 F nuclease activity
GO:0004527 F exonuclease activity
GO:0005737 C cytoplasm
GO:0006259 P DNA metabolic process
GO:0008310 F single-stranded DNA 3'-5' exodeoxyribonuclease activity
GO:0008408 F 3'-5' exonuclease activity
GO:0016787 F hydrolase activity
GO:0016788 F hydrolase activity, acting on ester bonds
GO:0016888 F endodeoxyribonuclease activity, producing 5'-phosphomonoesters
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090503 P RNA phosphodiester bond hydrolysis, exonucleolytic
13161 O_BomoEE21846_complete:A_BomoEE_comp70266_c0_seq1
383bp
 PREDICTED:_uncharacterized_protein_LOC106137331_[Amyelois_transitella]
13162 O_BomoEE21847_complete:A_BomoEE_comp70266_c0_seq1
230bp
 PREDICTED:_probable_methylthioribulose-1-phosphate_dehydratase_[Amyelois_transitella]
GO:0005737 C cytoplasm
GO:0008270 F zinc ion binding
GO:0008652 P cellular amino acid biosynthetic process
GO:0009086 P methionine biosynthetic process
GO:0016829 F lyase activity
GO:0019284 P L-methionine salvage from S-adenosylmethionine
GO:0019509 P L-methionine salvage from methylthioadenosine
GO:0046570 F methylthioribulose 1-phosphate dehydratase activity
GO:0046872 F metal ion binding
13163 O_BomoEE21848_complete:A_BomoEE_comp70266_c0_seq2
383bp
 PREDICTED:_uncharacterized_protein_LOC106137331_[Amyelois_transitella]
13164 O_BomoEE21849_5prime_partial:A_BomoEE_comp70266_c0_seq2
240bp
 PREDICTED:_probable_methylthioribulose-1-phosphate_dehydratase_[Amyelois_transitella]
GO:0005737 C cytoplasm
GO:0008270 F zinc ion binding
GO:0008652 P cellular amino acid biosynthetic process
GO:0009086 P methionine biosynthetic process
GO:0016829 F lyase activity
GO:0019284 P L-methionine salvage from S-adenosylmethionine
GO:0019509 P L-methionine salvage from methylthioadenosine
GO:0046570 F methylthioribulose 1-phosphate dehydratase activity
GO:0046872 F metal ion binding
13165 O_BomoEE2184_complete:A_BomoEE_comp33604_c0_seq1
265bp
 uncharacterized_protein_LOC767623_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001933 P negative regulation of protein phosphorylation
GO:0005737 C cytoplasm
GO:0005844 C polysome
GO:0006417 P regulation of translation
GO:0007399 P nervous system development
GO:0030154 P cell differentiation
GO:0031333 P negative regulation of protein-containing complex assembly
GO:0031953 P negative regulation of protein autophosphorylation
GO:0034198 P cellular response to amino acid starvation
GO:0042149 P cellular response to glucose starvation
GO:0045666 P positive regulation of neuron differentiation
GO:0060548 P negative regulation of cell death
GO:0060733 P GCN2-mediated signaling
GO:0070301 P cellular response to hydrogen peroxide
GO:0071264 P positive regulation of translational initiation in response to starvation
GO:0071468 P cellular response to acidic pH
GO:0071494 P cellular response to UV-C
GO:0072755 P cellular response to benomyl
GO:0097201 P negative regulation of transcription from RNA polymerase II promoter in response to stress
GO:1990138 P neuron projection extension
GO:1990253 P cellular response to leucine starvation
13166 O_BomoEE21850_complete:A_BomoEE_comp70267_c0_seq1
104bp
13167 O_BomoEE21851_5prime_partial:A_BomoEE_comp70268_c0_seq1
235bp
 PREDICTED:_protein_lin-49,_partial_[Amyelois_transitella]
13168 O_BomoEE21852_5prime_partial:A_BomoEE_comp70268_c0_seq2
376bp
 PREDICTED:_protein_lin-49,_partial_[Amyelois_transitella]
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0016568 P chromatin organization
GO:0043966 P histone H3 acetylation
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0070776 C MOZ/MORF histone acetyltransferase complex
GO:1901796 P regulation of signal transduction by p53 class mediator
13169 O_BomoEE21853_5prime_partial:A_BomoEE_comp70268_c0_seq3
216bp
 PREDICTED:_protein_lin-49,_partial_[Amyelois_transitella]
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0016568 P chromatin organization
GO:0043966 P histone H3 acetylation
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0070776 C MOZ/MORF histone acetyltransferase complex
GO:1901796 P regulation of signal transduction by p53 class mediator
13170 O_BomoEE21854_5prime_partial:A_BomoEE_comp70268_c0_seq4
408bp
 PREDICTED:_protein_lin-49,_partial_[Amyelois_transitella]
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0016568 P chromatin organization
GO:0043966 P histone H3 acetylation
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0070776 C MOZ/MORF histone acetyltransferase complex
GO:1901796 P regulation of signal transduction by p53 class mediator
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