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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
13081 O_BomoEE21774_5prime_partial:A_BomoEE_comp70248_c0_seq10
197bp
13082 O_BomoEE21775_complete:A_BomoEE_comp70248_c0_seq10
146bp
 PREDICTED:_GDNF-inducible_zinc_finger_protein_1-like_isoform_X2_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003713 F transcription coactivator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0017053 C transcription repressor complex
GO:0019827 P stem cell population maintenance
GO:0022008 P neurogenesis
GO:0030154 P cell differentiation
GO:0030512 P negative regulation of transforming growth factor beta receptor signaling pathway
GO:0030853 P negative regulation of granulocyte differentiation
GO:0033613 F DNA-binding transcription factor binding
GO:0035019 P somatic stem cell population maintenance
GO:0043457 P regulation of cellular respiration
GO:0043565 F sequence-specific DNA binding
GO:0043586 P tongue development
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046332 F SMAD binding
GO:0046872 F metal ion binding
GO:0050872 P white fat cell differentiation
GO:0050873 P brown fat cell differentiation
GO:0060021 P roof of mouth development
GO:0090336 P positive regulation of brown fat cell differentiation
13083 O_BomoEE21776_3prime_partial:A_BomoEE_comp70248_c0_seq10
135bp
13084 O_BomoEE21777_complete:A_BomoEE_comp70248_c0_seq11
372bp
 PREDICTED:_GDNF-inducible_zinc_finger_protein_1-like_isoform_X2_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000278 P mitotic cell cycle
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001078 F DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008168 F methyltransferase activity
GO:0016568 P chromatin organization
GO:0016575 P histone deacetylation
GO:0016740 F transferase activity
GO:0032259 P methylation
GO:0043565 F sequence-specific DNA binding
GO:0044212 F transcription cis-regulatory region binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0051567 P histone H3-K9 methylation
GO:0070491 F DNA-binding transcription factor binding
13085 O_BomoEE21778_5prime_partial:A_BomoEE_comp70248_c0_seq11
169bp
13086 O_BomoEE21779_3prime_partial:A_BomoEE_comp70248_c0_seq11
135bp
13087 O_BomoEE2177_complete:A_BomoEE_comp33593_c0_seq1
114bp
13088 O_BomoEE21780_complete:A_BomoEE_comp70248_c0_seq12
172bp
 PREDICTED:_GDNF-inducible_zinc_finger_protein_1-like_isoform_X2_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003713 F transcription coactivator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0017053 C transcription repressor complex
GO:0019827 P stem cell population maintenance
GO:0022008 P neurogenesis
GO:0030154 P cell differentiation
GO:0030512 P negative regulation of transforming growth factor beta receptor signaling pathway
GO:0030853 P negative regulation of granulocyte differentiation
GO:0033613 F DNA-binding transcription factor binding
GO:0035019 P somatic stem cell population maintenance
GO:0043457 P regulation of cellular respiration
GO:0043565 F sequence-specific DNA binding
GO:0043586 P tongue development
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046332 F SMAD binding
GO:0046872 F metal ion binding
GO:0050872 P white fat cell differentiation
GO:0050873 P brown fat cell differentiation
GO:0060021 P roof of mouth development
GO:0090336 P positive regulation of brown fat cell differentiation
13089 O_BomoEE21781_complete:A_BomoEE_comp70248_c0_seq12
113bp
13090 O_BomoEE21782_complete:A_BomoEE_comp70250_c0_seq1
145bp
 PREDICTED:_uncharacterized_protein_LOC106133979_isoform_X2_[Amyelois_transitella]
13091 O_BomoEE21783_complete:A_BomoEE_comp70250_c0_seq2
173bp
 PREDICTED:_uncharacterized_protein_LOC106133979_isoform_X2_[Amyelois_transitella]
13092 O_BomoEE21784_5prime_partial:A_BomoEE_comp70252_c0_seq1
196bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101744503_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0008033 P tRNA processing
13093 O_BomoEE21785_5prime_partial:A_BomoEE_comp70252_c0_seq1
110bp
13094 O_BomoEE21786_complete:A_BomoEE_comp70258_c0_seq1
993bp
 PREDICTED:_intraflagellar_transport_protein_140_homolog_[Amyelois_transitella]
GO:0001750 C photoreceptor outer segment
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0005929 C cilium
GO:0005930 C axoneme
GO:0007368 P determination of left/right symmetry
GO:0007507 P heart development
GO:0008589 P regulation of smoothened signaling pathway
GO:0021532 P neural tube patterning
GO:0030030 P cell projection organization
GO:0030991 C intraciliary transport particle A
GO:0031513 C non-motile cilium
GO:0032391 C photoreceptor connecting cilium
GO:0035108 P limb morphogenesis
GO:0035721 P intraciliary retrograde transport
GO:0035845 P photoreceptor cell outer segment organization
GO:0036064 C ciliary basal body
GO:0042073 P intraciliary transport
GO:0042384 P cilium assembly
GO:0042995 C cell projection
GO:0048705 P skeletal system morphogenesis
GO:0060041 P retina development in camera-type eye
GO:0060271 P cilium assembly
GO:0061512 P protein localization to cilium
GO:0072001 P renal system development
GO:0072372 C cilium
GO:0097542 C ciliary tip
GO:1902017 P regulation of cilium assembly
13095 O_BomoEE21787_3prime_partial:A_BomoEE_comp70258_c0_seq1
132bp
 PREDICTED:_intraflagellar_transport_protein_140_homolog_[Amyelois_transitella]
GO:0001750 C photoreceptor outer segment
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0005929 C cilium
GO:0005930 C axoneme
GO:0007368 P determination of left/right symmetry
GO:0007507 P heart development
GO:0008589 P regulation of smoothened signaling pathway
GO:0021532 P neural tube patterning
GO:0030030 P cell projection organization
GO:0030991 C intraciliary transport particle A
GO:0031513 C non-motile cilium
GO:0032391 C photoreceptor connecting cilium
GO:0035108 P limb morphogenesis
GO:0035721 P intraciliary retrograde transport
GO:0035845 P photoreceptor cell outer segment organization
GO:0036064 C ciliary basal body
GO:0042073 P intraciliary transport
GO:0042384 P cilium assembly
GO:0042995 C cell projection
GO:0048705 P skeletal system morphogenesis
GO:0060041 P retina development in camera-type eye
GO:0060271 P cilium assembly
GO:0061512 P protein localization to cilium
GO:0072001 P renal system development
GO:0072372 C cilium
GO:0097542 C ciliary tip
GO:1902017 P regulation of cilium assembly
13096 O_BomoEE21788_complete:A_BomoEE_comp70258_c0_seq2
993bp
 PREDICTED:_intraflagellar_transport_protein_140_homolog_[Amyelois_transitella]
GO:0001750 C photoreceptor outer segment
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0005929 C cilium
GO:0005930 C axoneme
GO:0007368 P determination of left/right symmetry
GO:0007507 P heart development
GO:0008589 P regulation of smoothened signaling pathway
GO:0021532 P neural tube patterning
GO:0030030 P cell projection organization
GO:0030991 C intraciliary transport particle A
GO:0031513 C non-motile cilium
GO:0032391 C photoreceptor connecting cilium
GO:0035108 P limb morphogenesis
GO:0035721 P intraciliary retrograde transport
GO:0035845 P photoreceptor cell outer segment organization
GO:0036064 C ciliary basal body
GO:0042073 P intraciliary transport
GO:0042384 P cilium assembly
GO:0042995 C cell projection
GO:0048705 P skeletal system morphogenesis
GO:0060041 P retina development in camera-type eye
GO:0060271 P cilium assembly
GO:0061512 P protein localization to cilium
GO:0072001 P renal system development
GO:0072372 C cilium
GO:0097542 C ciliary tip
GO:1902017 P regulation of cilium assembly
13097 O_BomoEE21789_complete:A_BomoEE_comp70258_c0_seq2
385bp
 PREDICTED:_intraflagellar_transport_protein_140_homolog_[Amyelois_transitella]
GO:0001750 C photoreceptor outer segment
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0005929 C cilium
GO:0005930 C axoneme
GO:0007368 P determination of left/right symmetry
GO:0007507 P heart development
GO:0008589 P regulation of smoothened signaling pathway
GO:0021532 P neural tube patterning
GO:0030030 P cell projection organization
GO:0030991 C intraciliary transport particle A
GO:0031513 C non-motile cilium
GO:0032391 C photoreceptor connecting cilium
GO:0035108 P limb morphogenesis
GO:0035721 P intraciliary retrograde transport
GO:0035845 P photoreceptor cell outer segment organization
GO:0036064 C ciliary basal body
GO:0042073 P intraciliary transport
GO:0042384 P cilium assembly
GO:0042995 C cell projection
GO:0048705 P skeletal system morphogenesis
GO:0060041 P retina development in camera-type eye
GO:0060271 P cilium assembly
GO:0061512 P protein localization to cilium
GO:0072001 P renal system development
GO:0072372 C cilium
GO:0097542 C ciliary tip
GO:1902017 P regulation of cilium assembly
13098 O_BomoEE2178_complete:A_BomoEE_comp33593_c0_seq1
106bp
13099 O_BomoEE21790_complete:A_BomoEE_comp70258_c0_seq3
983bp
 PREDICTED:_intraflagellar_transport_protein_140_homolog_[Amyelois_transitella]
GO:0001750 C photoreceptor outer segment
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0005929 C cilium
GO:0005930 C axoneme
GO:0007368 P determination of left/right symmetry
GO:0007507 P heart development
GO:0008589 P regulation of smoothened signaling pathway
GO:0021532 P neural tube patterning
GO:0030030 P cell projection organization
GO:0030991 C intraciliary transport particle A
GO:0031513 C non-motile cilium
GO:0032391 C photoreceptor connecting cilium
GO:0035108 P limb morphogenesis
GO:0035721 P intraciliary retrograde transport
GO:0035845 P photoreceptor cell outer segment organization
GO:0036064 C ciliary basal body
GO:0042073 P intraciliary transport
GO:0042384 P cilium assembly
GO:0042995 C cell projection
GO:0048705 P skeletal system morphogenesis
GO:0060041 P retina development in camera-type eye
GO:0060271 P cilium assembly
GO:0061512 P protein localization to cilium
GO:0072001 P renal system development
GO:0072372 C cilium
GO:0097542 C ciliary tip
GO:1902017 P regulation of cilium assembly
13100 O_BomoEE21791_3prime_partial:A_BomoEE_comp70258_c0_seq4
1108bp
 PREDICTED:_intraflagellar_transport_protein_140_homolog_[Amyelois_transitella]
GO:0001750 C photoreceptor outer segment
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0005929 C cilium
GO:0005930 C axoneme
GO:0007368 P determination of left/right symmetry
GO:0007507 P heart development
GO:0008589 P regulation of smoothened signaling pathway
GO:0021532 P neural tube patterning
GO:0030030 P cell projection organization
GO:0030991 C intraciliary transport particle A
GO:0031513 C non-motile cilium
GO:0032391 C photoreceptor connecting cilium
GO:0035108 P limb morphogenesis
GO:0035721 P intraciliary retrograde transport
GO:0035845 P photoreceptor cell outer segment organization
GO:0036064 C ciliary basal body
GO:0042073 P intraciliary transport
GO:0042384 P cilium assembly
GO:0042995 C cell projection
GO:0048705 P skeletal system morphogenesis
GO:0060041 P retina development in camera-type eye
GO:0060271 P cilium assembly
GO:0061512 P protein localization to cilium
GO:0072001 P renal system development
GO:0072372 C cilium
GO:0097542 C ciliary tip
GO:1902017 P regulation of cilium assembly
13101 O_BomoEE21792_complete:A_BomoEE_comp70258_c0_seq5
983bp
 PREDICTED:_intraflagellar_transport_protein_140_homolog_[Amyelois_transitella]
GO:0001750 C photoreceptor outer segment
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0005929 C cilium
GO:0005930 C axoneme
GO:0007368 P determination of left/right symmetry
GO:0007507 P heart development
GO:0008589 P regulation of smoothened signaling pathway
GO:0021532 P neural tube patterning
GO:0030030 P cell projection organization
GO:0030991 C intraciliary transport particle A
GO:0031513 C non-motile cilium
GO:0032391 C photoreceptor connecting cilium
GO:0035108 P limb morphogenesis
GO:0035721 P intraciliary retrograde transport
GO:0035845 P photoreceptor cell outer segment organization
GO:0036064 C ciliary basal body
GO:0042073 P intraciliary transport
GO:0042384 P cilium assembly
GO:0042995 C cell projection
GO:0048705 P skeletal system morphogenesis
GO:0060041 P retina development in camera-type eye
GO:0060271 P cilium assembly
GO:0061512 P protein localization to cilium
GO:0072001 P renal system development
GO:0072372 C cilium
GO:0097542 C ciliary tip
GO:1902017 P regulation of cilium assembly
13102 O_BomoEE21793_complete:A_BomoEE_comp70258_c0_seq5
323bp
 PREDICTED:_intraflagellar_transport_protein_140_homolog_[Amyelois_transitella]
GO:0001750 C photoreceptor outer segment
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0005929 C cilium
GO:0005930 C axoneme
GO:0007368 P determination of left/right symmetry
GO:0007507 P heart development
GO:0008589 P regulation of smoothened signaling pathway
GO:0021532 P neural tube patterning
GO:0030030 P cell projection organization
GO:0030991 C intraciliary transport particle A
GO:0031513 C non-motile cilium
GO:0032391 C photoreceptor connecting cilium
GO:0035108 P limb morphogenesis
GO:0035721 P intraciliary retrograde transport
GO:0035845 P photoreceptor cell outer segment organization
GO:0036064 C ciliary basal body
GO:0042073 P intraciliary transport
GO:0042384 P cilium assembly
GO:0042995 C cell projection
GO:0048705 P skeletal system morphogenesis
GO:0060041 P retina development in camera-type eye
GO:0060271 P cilium assembly
GO:0061512 P protein localization to cilium
GO:0072001 P renal system development
GO:0072372 C cilium
GO:0097542 C ciliary tip
GO:1902017 P regulation of cilium assembly
13103 O_BomoEE21794_complete:A_BomoEE_comp70258_c0_seq6
202bp
 PREDICTED:_intraflagellar_transport_protein_140_homolog_[Amyelois_transitella]
GO:0001750 C photoreceptor outer segment
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0005929 C cilium
GO:0005930 C axoneme
GO:0007368 P determination of left/right symmetry
GO:0007507 P heart development
GO:0008589 P regulation of smoothened signaling pathway
GO:0021532 P neural tube patterning
GO:0030030 P cell projection organization
GO:0030991 C intraciliary transport particle A
GO:0031513 C non-motile cilium
GO:0032391 C photoreceptor connecting cilium
GO:0035108 P limb morphogenesis
GO:0035721 P intraciliary retrograde transport
GO:0035845 P photoreceptor cell outer segment organization
GO:0036064 C ciliary basal body
GO:0042073 P intraciliary transport
GO:0042384 P cilium assembly
GO:0042995 C cell projection
GO:0048705 P skeletal system morphogenesis
GO:0060041 P retina development in camera-type eye
GO:0060271 P cilium assembly
GO:0061512 P protein localization to cilium
GO:0072001 P renal system development
GO:0072372 C cilium
GO:0097542 C ciliary tip
GO:1902017 P regulation of cilium assembly
13104 O_BomoEE21795_complete:A_BomoEE_comp70258_c0_seq7
1361bp
 PREDICTED:_intraflagellar_transport_protein_140_homolog_[Amyelois_transitella]
GO:0001750 C photoreceptor outer segment
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0005929 C cilium
GO:0005930 C axoneme
GO:0007368 P determination of left/right symmetry
GO:0007507 P heart development
GO:0008589 P regulation of smoothened signaling pathway
GO:0021532 P neural tube patterning
GO:0030030 P cell projection organization
GO:0030991 C intraciliary transport particle A
GO:0031513 C non-motile cilium
GO:0032391 C photoreceptor connecting cilium
GO:0035108 P limb morphogenesis
GO:0035721 P intraciliary retrograde transport
GO:0035845 P photoreceptor cell outer segment organization
GO:0036064 C ciliary basal body
GO:0042073 P intraciliary transport
GO:0042384 P cilium assembly
GO:0042995 C cell projection
GO:0048705 P skeletal system morphogenesis
GO:0060041 P retina development in camera-type eye
GO:0060271 P cilium assembly
GO:0061512 P protein localization to cilium
GO:0072001 P renal system development
GO:0072372 C cilium
GO:0097542 C ciliary tip
GO:1902017 P regulation of cilium assembly
13105 O_BomoEE21796_5prime_partial:A_BomoEE_comp70260_c0_seq1
118bp
13106 O_BomoEE21797_3prime_partial:A_BomoEE_comp70261_c0_seq1
1232bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_huntingtin-interacting_protein_1_[Bombyx_mori]
GO:0003779 F actin binding
GO:0005200 F structural constituent of cytoskeleton
GO:0005515 F protein binding
GO:0005543 F phospholipid binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006897 P endocytosis
GO:0006915 P apoptotic process
GO:0006919 P activation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0030136 C clathrin-coated vesicle
GO:0030154 P cell differentiation
GO:0030276 F clathrin binding
GO:0030665 C clathrin-coated vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0035091 F phosphatidylinositol binding
GO:0042981 P regulation of apoptotic process
GO:0043231 C intracellular membrane-bounded organelle
GO:0048260 P positive regulation of receptor-mediated endocytosis
GO:0048268 P clathrin coat assembly
GO:0072583 P clathrin-dependent endocytosis
GO:0097190 P apoptotic signaling pathway
13107 O_BomoEE21798_complete:A_BomoEE_comp70261_c0_seq1
143bp
13108 O_BomoEE21799_complete:A_BomoEE_comp70261_c0_seq2
976bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_huntingtin-interacting_protein_1_[Bombyx_mori]
GO:0003779 F actin binding
GO:0005200 F structural constituent of cytoskeleton
GO:0005515 F protein binding
GO:0005543 F phospholipid binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006897 P endocytosis
GO:0006915 P apoptotic process
GO:0006919 P activation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0030136 C clathrin-coated vesicle
GO:0030154 P cell differentiation
GO:0030276 F clathrin binding
GO:0030665 C clathrin-coated vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0035091 F phosphatidylinositol binding
GO:0042981 P regulation of apoptotic process
GO:0043231 C intracellular membrane-bounded organelle
GO:0048260 P positive regulation of receptor-mediated endocytosis
GO:0048268 P clathrin coat assembly
GO:0072583 P clathrin-dependent endocytosis
GO:0097190 P apoptotic signaling pathway
13109 O_BomoEE2179_complete:A_BomoEE_comp33593_c0_seq1
100bp
13110 O_BomoEE217_complete:A_BomoEE_comp3252_c0_seq2
270bp
 PREDICTED:_uncharacterized_protein_LOC106137405_[Amyelois_transitella]
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