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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
13051 O_BomoEE21747_complete:A_BomoEE_comp70240_c0_seq1
1980bp
 PREDICTED:_uncharacterized_protein_LOC101737406_isoform_X1_[Bombyx_mori]
13052 O_BomoEE21748_complete:A_BomoEE_comp70240_c0_seq1
166bp
13053 O_BomoEE21749_complete:A_BomoEE_comp70240_c0_seq1
106bp
13054 O_BomoEE2174_complete:A_BomoEE_comp33588_c0_seq1
405bp
 S-adenosylmethionine_synthetase_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004478 F methionine adenosyltransferase activity
GO:0005524 F ATP binding
GO:0005829 C cytosol
GO:0006556 P S-adenosylmethionine biosynthetic process
GO:0006730 P one-carbon metabolic process
GO:0008340 P determination of adult lifespan
GO:0016740 F transferase activity
GO:0022416 P chaeta development
GO:0035220 P wing disc development
GO:0046872 F metal ion binding
13055 O_BomoEE21750_complete:A_BomoEE_comp70247_c0_seq1
359bp
 Uncharacterized_protein_OBRU01_16391_[Operophtera_brumata]
13056 O_BomoEE21751_complete:A_BomoEE_comp70247_c0_seq1
132bp
13057 O_BomoEE21752_complete:A_BomoEE_comp70248_c0_seq1
119bp
 PREDICTED:_GDNF-inducible_zinc_finger_protein_1-like_isoform_X2_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003713 F transcription coactivator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0017053 C transcription repressor complex
GO:0019827 P stem cell population maintenance
GO:0022008 P neurogenesis
GO:0030154 P cell differentiation
GO:0030512 P negative regulation of transforming growth factor beta receptor signaling pathway
GO:0030853 P negative regulation of granulocyte differentiation
GO:0033613 F DNA-binding transcription factor binding
GO:0035019 P somatic stem cell population maintenance
GO:0043457 P regulation of cellular respiration
GO:0043565 F sequence-specific DNA binding
GO:0043586 P tongue development
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046332 F SMAD binding
GO:0046872 F metal ion binding
GO:0050872 P white fat cell differentiation
GO:0050873 P brown fat cell differentiation
GO:0060021 P roof of mouth development
GO:0090336 P positive regulation of brown fat cell differentiation
13058 O_BomoEE21753_complete:A_BomoEE_comp70248_c0_seq1
113bp
13059 O_BomoEE21754_complete:A_BomoEE_comp70248_c0_seq2
372bp
 PREDICTED:_GDNF-inducible_zinc_finger_protein_1-like_isoform_X2_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000278 P mitotic cell cycle
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001078 F DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008168 F methyltransferase activity
GO:0016568 P chromatin organization
GO:0016575 P histone deacetylation
GO:0016740 F transferase activity
GO:0032259 P methylation
GO:0043565 F sequence-specific DNA binding
GO:0044212 F transcription cis-regulatory region binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0051567 P histone H3-K9 methylation
GO:0070491 F DNA-binding transcription factor binding
13060 O_BomoEE21755_complete:A_BomoEE_comp70248_c0_seq2
119bp
 PREDICTED:_GDNF-inducible_zinc_finger_protein_1-like_isoform_X2_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003713 F transcription coactivator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0017053 C transcription repressor complex
GO:0019827 P stem cell population maintenance
GO:0022008 P neurogenesis
GO:0030154 P cell differentiation
GO:0030512 P negative regulation of transforming growth factor beta receptor signaling pathway
GO:0030853 P negative regulation of granulocyte differentiation
GO:0033613 F DNA-binding transcription factor binding
GO:0035019 P somatic stem cell population maintenance
GO:0043457 P regulation of cellular respiration
GO:0043565 F sequence-specific DNA binding
GO:0043586 P tongue development
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046332 F SMAD binding
GO:0046872 F metal ion binding
GO:0050872 P white fat cell differentiation
GO:0050873 P brown fat cell differentiation
GO:0060021 P roof of mouth development
GO:0090336 P positive regulation of brown fat cell differentiation
13061 O_BomoEE21756_complete:A_BomoEE_comp70248_c0_seq2
113bp
13062 O_BomoEE21757_complete:A_BomoEE_comp70248_c0_seq3
541bp
 PREDICTED:_GDNF-inducible_zinc_finger_protein_1-like_isoform_X2_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000980 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001078 F DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0001206 F DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0001658 P branching involved in ureteric bud morphogenesis
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0043565 F sequence-specific DNA binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
13063 O_BomoEE21758_complete:A_BomoEE_comp70248_c0_seq3
113bp
13064 O_BomoEE21759_complete:A_BomoEE_comp70248_c0_seq4
167bp
 PREDICTED:_GDNF-inducible_zinc_finger_protein_1-like_isoform_X2_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003713 F transcription coactivator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0017053 C transcription repressor complex
GO:0019827 P stem cell population maintenance
GO:0022008 P neurogenesis
GO:0030154 P cell differentiation
GO:0030512 P negative regulation of transforming growth factor beta receptor signaling pathway
GO:0030853 P negative regulation of granulocyte differentiation
GO:0033613 F DNA-binding transcription factor binding
GO:0035019 P somatic stem cell population maintenance
GO:0043457 P regulation of cellular respiration
GO:0043565 F sequence-specific DNA binding
GO:0043586 P tongue development
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046332 F SMAD binding
GO:0046872 F metal ion binding
GO:0050872 P white fat cell differentiation
GO:0050873 P brown fat cell differentiation
GO:0060021 P roof of mouth development
GO:0090336 P positive regulation of brown fat cell differentiation
13065 O_BomoEE2175_complete:A_BomoEE_comp33589_c0_seq1
194bp
 partner_of_Y14_and_mago_[Bombyx_mori]
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0035145 C exon-exon junction complex
13066 O_BomoEE21760_complete:A_BomoEE_comp70248_c0_seq4
113bp
13067 O_BomoEE21761_5prime_partial:A_BomoEE_comp70248_c0_seq5
169bp
13068 O_BomoEE21762_3prime_partial:A_BomoEE_comp70248_c0_seq5
135bp
13069 O_BomoEE21763_5prime_partial:A_BomoEE_comp70248_c0_seq6
192bp
13070 O_BomoEE21764_complete:A_BomoEE_comp70248_c0_seq6
141bp
 PREDICTED:_GDNF-inducible_zinc_finger_protein_1-like_isoform_X2_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
13071 O_BomoEE21765_3prime_partial:A_BomoEE_comp70248_c0_seq6
135bp
13072 O_BomoEE21766_complete:A_BomoEE_comp70248_c0_seq7
510bp
 PREDICTED:_GDNF-inducible_zinc_finger_protein_1-like_isoform_X2_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000278 P mitotic cell cycle
GO:0000976 F transcription cis-regulatory region binding
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001078 F DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008168 F methyltransferase activity
GO:0016568 P chromatin organization
GO:0016575 P histone deacetylation
GO:0016740 F transferase activity
GO:0032259 P methylation
GO:0043565 F sequence-specific DNA binding
GO:0044212 F transcription cis-regulatory region binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0051567 P histone H3-K9 methylation
GO:0070491 F DNA-binding transcription factor binding
13073 O_BomoEE21767_5prime_partial:A_BomoEE_comp70248_c0_seq7
192bp
13074 O_BomoEE21768_3prime_partial:A_BomoEE_comp70248_c0_seq7
135bp
13075 O_BomoEE21769_complete:A_BomoEE_comp70248_c0_seq8
515bp
 PREDICTED:_GDNF-inducible_zinc_finger_protein_1-like_isoform_X2_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000278 P mitotic cell cycle
GO:0000976 F transcription cis-regulatory region binding
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001078 F DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008168 F methyltransferase activity
GO:0016568 P chromatin organization
GO:0016575 P histone deacetylation
GO:0016740 F transferase activity
GO:0032259 P methylation
GO:0043565 F sequence-specific DNA binding
GO:0044212 F transcription cis-regulatory region binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0051567 P histone H3-K9 methylation
GO:0070491 F DNA-binding transcription factor binding
13076 O_BomoEE2176_3prime_partial:A_BomoEE_comp33593_c0_seq1
568bp
 PREDICTED:_scaffold_attachment_factor_B1-like_isoform_X1_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
13077 O_BomoEE21770_5prime_partial:A_BomoEE_comp70248_c0_seq8
197bp
13078 O_BomoEE21771_3prime_partial:A_BomoEE_comp70248_c0_seq8
135bp
13079 O_BomoEE21772_complete:A_BomoEE_comp70248_c0_seq9
536bp
 PREDICTED:_GDNF-inducible_zinc_finger_protein_1-like_isoform_X2_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000980 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001078 F DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0001206 F DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0001658 P branching involved in ureteric bud morphogenesis
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0043565 F sequence-specific DNA binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
13080 O_BomoEE21773_complete:A_BomoEE_comp70248_c0_seq9
113bp
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