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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
12841 O_BomoEE21558_complete:A_BomoEE_comp70211_c0_seq14
110bp
12842 O_BomoEE21559_5prime_partial:A_BomoEE_comp70211_c0_seq15
256bp
12843 O_BomoEE2155_complete:A_BomoEE_comp33537_c0_seq2
105bp
12844 O_BomoEE21560_3prime_partial:A_BomoEE_comp70211_c0_seq15
239bp
 PREDICTED:_cullin-2_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0016567 P protein ubiquitination
GO:0030163 P protein catabolic process
GO:0030891 C VCB complex
GO:0031461 C cullin-RING ubiquitin ligase complex
GO:0031462 C Cul2-RING ubiquitin ligase complex
GO:0031625 F ubiquitin protein ligase binding
GO:0032403 F protein-containing complex binding
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0061630 F ubiquitin protein ligase activity
12845 O_BomoEE21561_complete:A_BomoEE_comp70211_c0_seq15
110bp
12846 O_BomoEE21562_complete:A_BomoEE_comp70211_c0_seq16
445bp
 PREDICTED:_cullin-2_[Papilio_polytes]
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0016567 P protein ubiquitination
GO:0030163 P protein catabolic process
GO:0030891 C VCB complex
GO:0031461 C cullin-RING ubiquitin ligase complex
GO:0031462 C Cul2-RING ubiquitin ligase complex
GO:0031625 F ubiquitin protein ligase binding
GO:0032403 F protein-containing complex binding
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0061630 F ubiquitin protein ligase activity
12847 O_BomoEE21563_complete:A_BomoEE_comp70211_c0_seq16
153bp
12848 O_BomoEE21564_complete:A_BomoEE_comp70211_c0_seq16
110bp
12849 O_BomoEE21565_complete:A_BomoEE_comp70211_c0_seq17
322bp
12850 O_BomoEE21566_complete:A_BomoEE_comp70211_c0_seq17
281bp
 Cullin-2_[Papilio_machaon]
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0016567 P protein ubiquitination
GO:0030163 P protein catabolic process
GO:0030891 C VCB complex
GO:0031461 C cullin-RING ubiquitin ligase complex
GO:0031462 C Cul2-RING ubiquitin ligase complex
GO:0031625 F ubiquitin protein ligase binding
GO:0032403 F protein-containing complex binding
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0061630 F ubiquitin protein ligase activity
12851 O_BomoEE21567_complete:A_BomoEE_comp70211_c0_seq17
153bp
12852 O_BomoEE21568_5prime_partial:A_BomoEE_comp70212_c0_seq2
119bp
 PREDICTED:_uncharacterized_protein_LOC105381261_[Plutella_xylostella]
12853 O_BomoEE21569_complete:A_BomoEE_comp70213_c0_seq1
1059bp
 PREDICTED:_probable_E3_ubiquitin-protein_ligase_HERC4_[Bombyx_mori]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007283 P spermatogenesis
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030154 P cell differentiation
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0061630 F ubiquitin protein ligase activity
12854 O_BomoEE2156_complete:A_BomoEE_comp33540_c0_seq1
877bp
 PREDICTED:_eukaryotic_translation_initiation_factor_3_subunit_C_isoform_X1_[Bombyx_mori]
GO:0001731 P formation of translation preinitiation complex
GO:0003723 F RNA binding
GO:0003743 F translation initiation factor activity
GO:0005737 C cytoplasm
GO:0005852 C eukaryotic translation initiation factor 3 complex
GO:0006412 P translation
GO:0006413 P translational initiation
GO:0006446 P regulation of translational initiation
GO:0016282 C eukaryotic 43S preinitiation complex
GO:0031369 F translation initiation factor binding
GO:0033290 C eukaryotic 48S preinitiation complex
12855 O_BomoEE21570_complete:A_BomoEE_comp70213_c0_seq1
471bp
 PREDICTED:_nucleoredoxin-like_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007275 P multicellular organism development
GO:0016055 P Wnt signaling pathway
GO:0016491 F oxidoreductase activity
GO:0030154 P cell differentiation
GO:0030178 P negative regulation of Wnt signaling pathway
GO:0031397 P negative regulation of protein ubiquitination
GO:0047134 F protein-disulfide reductase (NAD(P)) activity
GO:0055114 P obsolete oxidation-reduction process
GO:0072358 P circulatory system development
12856 O_BomoEE21571_complete:A_BomoEE_comp70213_c0_seq1
133bp
12857 O_BomoEE21572_complete:A_BomoEE_comp70213_c0_seq2
793bp
 PREDICTED:_probable_E3_ubiquitin-protein_ligase_HERC4_[Bombyx_mori]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007283 P spermatogenesis
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030154 P cell differentiation
GO:0042787 P ubiquitin-dependent protein catabolic process
12858 O_BomoEE21573_complete:A_BomoEE_comp70213_c0_seq2
471bp
 PREDICTED:_nucleoredoxin-like_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007275 P multicellular organism development
GO:0016055 P Wnt signaling pathway
GO:0016491 F oxidoreductase activity
GO:0030154 P cell differentiation
GO:0030178 P negative regulation of Wnt signaling pathway
GO:0031397 P negative regulation of protein ubiquitination
GO:0047134 F protein-disulfide reductase (NAD(P)) activity
GO:0055114 P obsolete oxidation-reduction process
GO:0072358 P circulatory system development
12859 O_BomoEE21574_complete:A_BomoEE_comp70213_c0_seq2
133bp
12860 O_BomoEE21575_complete:A_BomoEE_comp70213_c0_seq2
120bp
 PREDICTED:_probable_E3_ubiquitin-protein_ligase_HERC4_[Bombyx_mori]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007283 P spermatogenesis
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030154 P cell differentiation
GO:0042787 P ubiquitin-dependent protein catabolic process
12861 O_BomoEE21576_complete:A_BomoEE_comp70213_c0_seq3
623bp
 PREDICTED:_probable_E3_ubiquitin-protein_ligase_HERC4_[Bombyx_mori]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007283 P spermatogenesis
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030154 P cell differentiation
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0061630 F ubiquitin protein ligase activity
12862 O_BomoEE21577_complete:A_BomoEE_comp70213_c0_seq3
471bp
 PREDICTED:_nucleoredoxin-like_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007275 P multicellular organism development
GO:0016055 P Wnt signaling pathway
GO:0016491 F oxidoreductase activity
GO:0030154 P cell differentiation
GO:0030178 P negative regulation of Wnt signaling pathway
GO:0031397 P negative regulation of protein ubiquitination
GO:0047134 F protein-disulfide reductase (NAD(P)) activity
GO:0055114 P obsolete oxidation-reduction process
GO:0072358 P circulatory system development
12863 O_BomoEE21578_complete:A_BomoEE_comp70213_c0_seq3
133bp
12864 O_BomoEE21579_complete:A_BomoEE_comp70213_c0_seq4
1034bp
 PREDICTED:_probable_E3_ubiquitin-protein_ligase_HERC4_[Bombyx_mori]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007283 P spermatogenesis
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030154 P cell differentiation
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0061630 F ubiquitin protein ligase activity
12865 O_BomoEE2157_complete:A_BomoEE_comp33540_c0_seq1
419bp
 putative_zinc_finger_protein_91-like_protein_[Operophtera_brumata]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007049 P cell cycle
GO:0008284 P positive regulation of cell population proliferation
GO:0033674 P positive regulation of kinase activity
GO:0043066 P negative regulation of apoptotic process
GO:0045648 P positive regulation of erythrocyte differentiation
GO:0045654 P positive regulation of megakaryocyte differentiation
GO:0046872 F metal ion binding
GO:0051301 P cell division
GO:0051781 P positive regulation of cell division
GO:0072707 P cellular response to sodium dodecyl sulfate
GO:1901989 P positive regulation of cell cycle phase transition
12866 O_BomoEE21580_complete:A_BomoEE_comp70213_c0_seq4
471bp
 PREDICTED:_nucleoredoxin-like_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007275 P multicellular organism development
GO:0016055 P Wnt signaling pathway
GO:0016491 F oxidoreductase activity
GO:0030154 P cell differentiation
GO:0030178 P negative regulation of Wnt signaling pathway
GO:0031397 P negative regulation of protein ubiquitination
GO:0047134 F protein-disulfide reductase (NAD(P)) activity
GO:0055114 P obsolete oxidation-reduction process
GO:0072358 P circulatory system development
12867 O_BomoEE21581_complete:A_BomoEE_comp70213_c0_seq4
133bp
12868 O_BomoEE21582_complete:A_BomoEE_comp70213_c0_seq5
811bp
 PREDICTED:_probable_E3_ubiquitin-protein_ligase_HERC4_[Bombyx_mori]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007283 P spermatogenesis
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030154 P cell differentiation
GO:0042787 P ubiquitin-dependent protein catabolic process
12869 O_BomoEE21583_complete:A_BomoEE_comp70213_c0_seq5
471bp
 PREDICTED:_nucleoredoxin-like_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007275 P multicellular organism development
GO:0016055 P Wnt signaling pathway
GO:0016491 F oxidoreductase activity
GO:0030154 P cell differentiation
GO:0030178 P negative regulation of Wnt signaling pathway
GO:0031397 P negative regulation of protein ubiquitination
GO:0047134 F protein-disulfide reductase (NAD(P)) activity
GO:0055114 P obsolete oxidation-reduction process
GO:0072358 P circulatory system development
12870 O_BomoEE21584_complete:A_BomoEE_comp70213_c0_seq5
133bp
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