SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

previous next from show/95730
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
12811 O_BomoEE21530_complete:A_BomoEE_comp70211_c0_seq4
110bp
12812 O_BomoEE21531_5prime_partial:A_BomoEE_comp70211_c0_seq5
326bp
12813 O_BomoEE21532_3prime_partial:A_BomoEE_comp70211_c0_seq5
167bp
 PREDICTED:_cullin-2_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0016567 P protein ubiquitination
GO:0030163 P protein catabolic process
GO:0030891 C VCB complex
GO:0031461 C cullin-RING ubiquitin ligase complex
GO:0031462 C Cul2-RING ubiquitin ligase complex
GO:0031625 F ubiquitin protein ligase binding
GO:0032403 F protein-containing complex binding
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0061630 F ubiquitin protein ligase activity
12814 O_BomoEE21533_complete:A_BomoEE_comp70211_c0_seq6
322bp
12815 O_BomoEE21534_complete:A_BomoEE_comp70211_c0_seq6
281bp
 Cullin-2_[Papilio_machaon]
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0016567 P protein ubiquitination
GO:0030163 P protein catabolic process
GO:0030891 C VCB complex
GO:0031461 C cullin-RING ubiquitin ligase complex
GO:0031462 C Cul2-RING ubiquitin ligase complex
GO:0031625 F ubiquitin protein ligase binding
GO:0032403 F protein-containing complex binding
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0061630 F ubiquitin protein ligase activity
12816 O_BomoEE21535_complete:A_BomoEE_comp70211_c0_seq6
168bp
 PREDICTED:_cullin-2_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0016567 P protein ubiquitination
GO:0030163 P protein catabolic process
GO:0030891 C VCB complex
GO:0031461 C cullin-RING ubiquitin ligase complex
GO:0031462 C Cul2-RING ubiquitin ligase complex
GO:0031625 F ubiquitin protein ligase binding
GO:0032403 F protein-containing complex binding
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0061630 F ubiquitin protein ligase activity
12817 O_BomoEE21536_complete:A_BomoEE_comp70211_c0_seq6
153bp
12818 O_BomoEE21537_complete:A_BomoEE_comp70211_c0_seq6
110bp
12819 O_BomoEE21538_3prime_partial:A_BomoEE_comp70211_c0_seq7
108bp
12820 O_BomoEE21539_complete:A_BomoEE_comp70211_c0_seq8
322bp
12821 O_BomoEE2153_complete:A_BomoEE_comp33537_c0_seq2
396bp
 nucleosome_assembly_protein_isoform_1_[Bombyx_mori]
GO:0005634 C nucleus
GO:0006334 P nucleosome assembly
GO:0030425 C dendrite
GO:0043025 C neuronal cell body
12822 O_BomoEE21540_complete:A_BomoEE_comp70211_c0_seq8
281bp
 Cullin-2_[Papilio_machaon]
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0016567 P protein ubiquitination
GO:0030163 P protein catabolic process
GO:0030891 C VCB complex
GO:0031461 C cullin-RING ubiquitin ligase complex
GO:0031462 C Cul2-RING ubiquitin ligase complex
GO:0031625 F ubiquitin protein ligase binding
GO:0032403 F protein-containing complex binding
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0061630 F ubiquitin protein ligase activity
12823 O_BomoEE21541_complete:A_BomoEE_comp70211_c0_seq8
153bp
12824 O_BomoEE21542_complete:A_BomoEE_comp70211_c0_seq8
132bp
 PREDICTED:_cullin-2_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0016567 P protein ubiquitination
GO:0030163 P protein catabolic process
GO:0030891 C VCB complex
GO:0031461 C cullin-RING ubiquitin ligase complex
GO:0031462 C Cul2-RING ubiquitin ligase complex
GO:0031625 F ubiquitin protein ligase binding
GO:0032403 F protein-containing complex binding
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0061630 F ubiquitin protein ligase activity
12825 O_BomoEE21543_complete:A_BomoEE_comp70211_c0_seq10
168bp
 PREDICTED:_cullin-2_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0016567 P protein ubiquitination
GO:0030163 P protein catabolic process
GO:0030891 C VCB complex
GO:0031461 C cullin-RING ubiquitin ligase complex
GO:0031462 C Cul2-RING ubiquitin ligase complex
GO:0031625 F ubiquitin protein ligase binding
GO:0032403 F protein-containing complex binding
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0061630 F ubiquitin protein ligase activity
12826 O_BomoEE21544_complete:A_BomoEE_comp70211_c0_seq10
110bp
12827 O_BomoEE21545_3prime_partial:A_BomoEE_comp70211_c0_seq10
108bp
12828 O_BomoEE21546_complete:A_BomoEE_comp70211_c0_seq11
132bp
 PREDICTED:_cullin-2_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0016567 P protein ubiquitination
GO:0030163 P protein catabolic process
GO:0030891 C VCB complex
GO:0031461 C cullin-RING ubiquitin ligase complex
GO:0031462 C Cul2-RING ubiquitin ligase complex
GO:0031625 F ubiquitin protein ligase binding
GO:0032403 F protein-containing complex binding
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0061630 F ubiquitin protein ligase activity
12829 O_BomoEE21547_3prime_partial:A_BomoEE_comp70211_c0_seq11
108bp
12830 O_BomoEE21548_complete:A_BomoEE_comp70211_c0_seq12
334bp
 Cullin-2_[Papilio_machaon]
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0016567 P protein ubiquitination
GO:0030163 P protein catabolic process
GO:0030891 C VCB complex
GO:0031461 C cullin-RING ubiquitin ligase complex
GO:0031462 C Cul2-RING ubiquitin ligase complex
GO:0031625 F ubiquitin protein ligase binding
GO:0032403 F protein-containing complex binding
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0061630 F ubiquitin protein ligase activity
12831 O_BomoEE21549_complete:A_BomoEE_comp70211_c0_seq12
168bp
 PREDICTED:_cullin-2_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0016567 P protein ubiquitination
GO:0030163 P protein catabolic process
GO:0030891 C VCB complex
GO:0031461 C cullin-RING ubiquitin ligase complex
GO:0031462 C Cul2-RING ubiquitin ligase complex
GO:0031625 F ubiquitin protein ligase binding
GO:0032403 F protein-containing complex binding
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0061630 F ubiquitin protein ligase activity
12832 O_BomoEE2154_3prime_partial:A_BomoEE_comp33537_c0_seq2
145bp
12833 O_BomoEE21550_complete:A_BomoEE_comp70211_c0_seq12
153bp
12834 O_BomoEE21551_complete:A_BomoEE_comp70211_c0_seq12
110bp
12835 O_BomoEE21552_complete:A_BomoEE_comp70211_c0_seq13
373bp
 putative_cullin_isoform_1_[Danaus_plexippus]
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0016567 P protein ubiquitination
GO:0030163 P protein catabolic process
GO:0030891 C VCB complex
GO:0031461 C cullin-RING ubiquitin ligase complex
GO:0031462 C Cul2-RING ubiquitin ligase complex
GO:0031625 F ubiquitin protein ligase binding
GO:0032403 F protein-containing complex binding
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0061630 F ubiquitin protein ligase activity
12836 O_BomoEE21553_complete:A_BomoEE_comp70211_c0_seq13
153bp
12837 O_BomoEE21554_complete:A_BomoEE_comp70211_c0_seq14
322bp
12838 O_BomoEE21555_complete:A_BomoEE_comp70211_c0_seq14
281bp
 Cullin-2_[Papilio_machaon]
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0016567 P protein ubiquitination
GO:0030163 P protein catabolic process
GO:0030891 C VCB complex
GO:0031461 C cullin-RING ubiquitin ligase complex
GO:0031462 C Cul2-RING ubiquitin ligase complex
GO:0031625 F ubiquitin protein ligase binding
GO:0032403 F protein-containing complex binding
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0061630 F ubiquitin protein ligase activity
12839 O_BomoEE21556_complete:A_BomoEE_comp70211_c0_seq14
204bp
 PREDICTED:_cullin-2_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0016567 P protein ubiquitination
GO:0030163 P protein catabolic process
GO:0030891 C VCB complex
GO:0031461 C cullin-RING ubiquitin ligase complex
GO:0031462 C Cul2-RING ubiquitin ligase complex
GO:0031625 F ubiquitin protein ligase binding
GO:0032403 F protein-containing complex binding
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0061630 F ubiquitin protein ligase activity
12840 O_BomoEE21557_complete:A_BomoEE_comp70211_c0_seq14
153bp
previous next from show/95730

- SilkBase 1999-2023 -