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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
12331 O_BomoEE21099_complete:A_BomoEE_comp70102_c0_seq30
111bp
12332 O_BomoEE2109_complete:A_BomoEE_comp33499_c0_seq1
301bp
 PREDICTED:_BTB/POZ_domain-containing_adapter_for_CUL3-mediated_RhoA_degradation_protein_3_[Amyelois_transitella]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0016567 P protein ubiquitination
GO:0031463 C Cul3-RING ubiquitin ligase complex
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0051260 P protein homooligomerization
12333 O_BomoEE210_internal:A_BomoEE_comp3188_c1_seq1
115bp
 PREDICTED:_muscarinic_acetylcholine_receptor_DM1_[Bombyx_mori]
GO:0004871 F obsolete signal transducer activity
GO:0004930 F G protein-coupled receptor activity
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0007165 P signal transduction
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0007197 P adenylate cyclase-inhibiting G protein-coupled acetylcholine receptor signaling pathway
GO:0007200 P phospholipase C-activating G protein-coupled receptor signaling pathway
GO:0007207 P phospholipase C-activating G protein-coupled acetylcholine receptor signaling pathway
GO:0007213 P G protein-coupled acetylcholine receptor signaling pathway
GO:0007271 P synaptic transmission, cholinergic
GO:0008227 F G protein-coupled amine receptor activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016907 F G protein-coupled acetylcholine receptor activity
GO:0030054 C cell junction
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
12334 O_BomoEE21100_5prime_partial:A_BomoEE_comp70102_c0_seq30
107bp
12335 O_BomoEE21101_5prime_partial:A_BomoEE_comp70102_c0_seq31
1499bp
 PREDICTED:_dystonin-like_[Bombyx_mori]
GO:0003779 F actin binding
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005886 C plasma membrane
GO:0007050 P regulation of cell cycle
GO:0008017 F microtubule binding
GO:0008152 P metabolic process
GO:0010632 P regulation of epithelial cell migration
GO:0016020 C membrane
GO:0016055 P Wnt signaling pathway
GO:0016887 F ATP hydrolysis activity
GO:0030177 P positive regulation of Wnt signaling pathway
GO:0032587 C ruffle membrane
GO:0032886 P regulation of microtubule-based process
GO:0042060 P wound healing
GO:0042995 C cell projection
GO:0043001 P Golgi to plasma membrane protein transport
GO:0044822 F RNA binding
GO:0045773 P positive regulation of axon extension
GO:0046872 F metal ion binding
GO:0051015 F actin filament binding
GO:0051893 P regulation of focal adhesion assembly
12336 O_BomoEE21102_complete:A_BomoEE_comp70102_c0_seq31
392bp
12337 O_BomoEE21103_complete:A_BomoEE_comp70102_c0_seq31
223bp
12338 O_BomoEE21104_complete:A_BomoEE_comp70102_c0_seq31
213bp
12339 O_BomoEE21105_complete:A_BomoEE_comp70102_c0_seq31
185bp
12340 O_BomoEE21106_complete:A_BomoEE_comp70102_c0_seq31
118bp
12341 O_BomoEE21107_5prime_partial:A_BomoEE_comp70102_c0_seq31
107bp
12342 O_BomoEE21108_complete:A_BomoEE_comp70103_c0_seq1
133bp
 ribosomal_protein_S26_[Bombyx_mori]
GO:0003729 F mRNA binding
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0022627 C cytosolic small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
12343 O_BomoEE21109_complete:A_BomoEE_comp70103_c1_seq1
347bp
 AF461149_1_transposase_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005634 C nucleus
GO:0006310 P DNA recombination
GO:0015074 P DNA integration
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
12344 O_BomoEE2110_complete:A_BomoEE_comp33502_c0_seq1
653bp
 scarlet_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005395 F obsolete eye pigment precursor transporter activity
GO:0005524 F ATP binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006726 P eye pigment biosynthetic process
GO:0006727 P ommochrome biosynthetic process
GO:0006810 P transport
GO:0006856 P eye pigment precursor transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
GO:0031409 F pigment binding
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0055085 P transmembrane transport
12345 O_BomoEE21110_5prime_partial:A_BomoEE_comp70104_c0_seq1
212bp
 PREDICTED:_formin-binding_protein_4-like_[Bombyx_mori]
12346 O_BomoEE21111_complete:A_BomoEE_comp70104_c0_seq2
205bp
 PREDICTED:_formin-binding_protein_4-like_[Bombyx_mori]
12347 O_BomoEE21112_complete:A_BomoEE_comp70104_c0_seq2
113bp
12348 O_BomoEE21113_internal:A_BomoEE_comp70105_c0_seq3
436bp
 PREDICTED:_uncharacterized_protein_LOC106135765_[Amyelois_transitella]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
12349 O_BomoEE21114_complete:A_BomoEE_comp70105_c0_seq3
219bp
12350 O_BomoEE21115_5prime_partial:A_BomoEE_comp70105_c0_seq3
106bp
12351 O_BomoEE21116_3prime_partial:A_BomoEE_comp70105_c0_seq4
286bp
 PREDICTED:_uncharacterized_protein_LOC106135765_[Amyelois_transitella]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
12352 O_BomoEE21117_complete:A_BomoEE_comp70105_c0_seq4
219bp
12353 O_BomoEE21118_5prime_partial:A_BomoEE_comp70105_c0_seq4
106bp
12354 O_BomoEE21119_3prime_partial:A_BomoEE_comp70105_c0_seq5
173bp
 PREDICTED:_uncharacterized_protein_LOC101738342_[Bombyx_mori]
12355 O_BomoEE2111_complete:A_BomoEE_comp33502_c0_seq1
101bp
12356 O_BomoEE21120_3prime_partial:A_BomoEE_comp70105_c0_seq5
165bp
12357 O_BomoEE21121_5prime_partial:A_BomoEE_comp70105_c0_seq5
106bp
12358 O_BomoEE21122_complete:A_BomoEE_comp70106_c0_seq1
1374bp
 PREDICTED:_ATP-dependent_helicase_brm_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003713 F transcription coactivator activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006909 P phagocytosis
GO:0007275 P multicellular organism development
GO:0007406 P negative regulation of neuroblast proliferation
GO:0007409 P axonogenesis
GO:0007419 P ventral cord development
GO:0007474 P imaginal disc-derived wing vein specification
GO:0007480 P imaginal disc-derived leg morphogenesis
GO:0007517 P muscle organ development
GO:0008586 P imaginal disc-derived wing vein morphogenesis
GO:0008587 P imaginal disc-derived wing margin morphogenesis
GO:0016568 P chromatin organization
GO:0016787 F hydrolase activity
GO:0016817 F hydrolase activity, acting on acid anhydrides
GO:0016887 F ATP hydrolysis activity
GO:0022008 P neurogenesis
GO:0035060 C brahma complex
GO:0035172 P hemocyte proliferation
GO:0035329 P hippo signaling
GO:0036335 P intestinal stem cell homeostasis
GO:0042393 F histone binding
GO:0043044 P chromatin remodeling
GO:0043974 P histone H3-K27 acetylation
GO:0045088 P regulation of innate immune response
GO:0045742 P positive regulation of epidermal growth factor receptor signaling pathway
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0048096 P epigenetic maintenance of chromatin in transcription-competent conformation
GO:0048477 P oogenesis
GO:0048666 P neuron development
GO:0048813 P dendrite morphogenesis
GO:0070604 C RSC-type complex
GO:0070983 P dendrite guidance
GO:2000134 P negative regulation of G1/S transition of mitotic cell cycle
GO:2000648 P positive regulation of stem cell proliferation
12359 O_BomoEE21123_complete:A_BomoEE_comp70106_c0_seq1
308bp
 PREDICTED:_ATP-dependent_helicase_brm_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003713 F transcription coactivator activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006909 P phagocytosis
GO:0007275 P multicellular organism development
GO:0007406 P negative regulation of neuroblast proliferation
GO:0007409 P axonogenesis
GO:0007419 P ventral cord development
GO:0007474 P imaginal disc-derived wing vein specification
GO:0007480 P imaginal disc-derived leg morphogenesis
GO:0007517 P muscle organ development
GO:0008586 P imaginal disc-derived wing vein morphogenesis
GO:0008587 P imaginal disc-derived wing margin morphogenesis
GO:0016568 P chromatin organization
GO:0016787 F hydrolase activity
GO:0016817 F hydrolase activity, acting on acid anhydrides
GO:0016887 F ATP hydrolysis activity
GO:0022008 P neurogenesis
GO:0035060 C brahma complex
GO:0035172 P hemocyte proliferation
GO:0035329 P hippo signaling
GO:0036335 P intestinal stem cell homeostasis
GO:0042393 F histone binding
GO:0043044 P chromatin remodeling
GO:0043974 P histone H3-K27 acetylation
GO:0045088 P regulation of innate immune response
GO:0045742 P positive regulation of epidermal growth factor receptor signaling pathway
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0048096 P epigenetic maintenance of chromatin in transcription-competent conformation
GO:0048477 P oogenesis
GO:0048666 P neuron development
GO:0048813 P dendrite morphogenesis
GO:0070604 C RSC-type complex
GO:0070983 P dendrite guidance
GO:2000134 P negative regulation of G1/S transition of mitotic cell cycle
GO:2000648 P positive regulation of stem cell proliferation
12360 O_BomoEE21124_complete:A_BomoEE_comp70106_c0_seq1
118bp
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