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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
12361 O_BomoEE21125_complete:A_BomoEE_comp70106_c0_seq1
113bp
12362 O_BomoEE21126_complete:A_BomoEE_comp70106_c0_seq1
112bp
12363 O_BomoEE21127_complete:A_BomoEE_comp70106_c0_seq1
100bp
12364 O_BomoEE21128_complete:A_BomoEE_comp70106_c0_seq2
1664bp
 PREDICTED:_ATP-dependent_helicase_brm_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003713 F transcription coactivator activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006909 P phagocytosis
GO:0007275 P multicellular organism development
GO:0007406 P negative regulation of neuroblast proliferation
GO:0007409 P axonogenesis
GO:0007419 P ventral cord development
GO:0007474 P imaginal disc-derived wing vein specification
GO:0007480 P imaginal disc-derived leg morphogenesis
GO:0007517 P muscle organ development
GO:0008586 P imaginal disc-derived wing vein morphogenesis
GO:0008587 P imaginal disc-derived wing margin morphogenesis
GO:0016568 P chromatin organization
GO:0016787 F hydrolase activity
GO:0016817 F hydrolase activity, acting on acid anhydrides
GO:0016887 F ATP hydrolysis activity
GO:0022008 P neurogenesis
GO:0035060 C brahma complex
GO:0035172 P hemocyte proliferation
GO:0035329 P hippo signaling
GO:0036335 P intestinal stem cell homeostasis
GO:0042393 F histone binding
GO:0043044 P chromatin remodeling
GO:0043974 P histone H3-K27 acetylation
GO:0045088 P regulation of innate immune response
GO:0045742 P positive regulation of epidermal growth factor receptor signaling pathway
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0048096 P epigenetic maintenance of chromatin in transcription-competent conformation
GO:0048477 P oogenesis
GO:0048666 P neuron development
GO:0048813 P dendrite morphogenesis
GO:0070604 C RSC-type complex
GO:0070983 P dendrite guidance
GO:2000134 P negative regulation of G1/S transition of mitotic cell cycle
GO:2000648 P positive regulation of stem cell proliferation
12365 O_BomoEE21129_complete:A_BomoEE_comp70106_c0_seq2
118bp
12366 O_BomoEE2112_complete:A_BomoEE_comp33504_c0_seq1
188bp
 PREDICTED:_caltractin-like_isoform_X3_[Bombyx_mori]
GO:0000922 C spindle pole
GO:0005509 F calcium ion binding
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005814 C centriole
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0008017 F microtubule binding
GO:0031683 F G-protein beta/gamma-subunit complex binding
GO:0032391 C photoreceptor connecting cilium
GO:0032795 F heterotrimeric G-protein binding
GO:0034605 P cellular response to heat
GO:0046872 F metal ion binding
GO:0051301 P cell division
12367 O_BomoEE21130_complete:A_BomoEE_comp70106_c0_seq2
113bp
12368 O_BomoEE21131_complete:A_BomoEE_comp70106_c0_seq2
112bp
12369 O_BomoEE21132_complete:A_BomoEE_comp70106_c0_seq2
100bp
12370 O_BomoEE21133_complete:A_BomoEE_comp70106_c3_seq1
421bp
 PREDICTED:_zinc_finger_protein_836-like_isoform_X1_[Amyelois_transitella]
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
12371 O_BomoEE21134_complete:A_BomoEE_comp70106_c3_seq2
332bp
 PREDICTED:_zinc_finger_protein_836-like_isoform_X1_[Amyelois_transitella]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
12372 O_BomoEE21135_complete:A_BomoEE_comp70107_c0_seq1
121bp
 PREDICTED:_phosphatidylinositol-glycan_biosynthesis_class_X_protein_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006506 P GPI anchor biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
12373 O_BomoEE21136_complete:A_BomoEE_comp70107_c0_seq2
121bp
 PREDICTED:_phosphatidylinositol-glycan_biosynthesis_class_X_protein_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006506 P GPI anchor biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
12374 O_BomoEE21137_complete:A_BomoEE_comp70107_c0_seq3
247bp
 PREDICTED:_phosphatidylinositol-glycan_biosynthesis_class_X_protein_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006506 P GPI anchor biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
12375 O_BomoEE21138_complete:A_BomoEE_comp70107_c0_seq4
251bp
 PREDICTED:_phosphatidylinositol-glycan_biosynthesis_class_X_protein_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006506 P GPI anchor biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
12376 O_BomoEE21139_complete:A_BomoEE_comp70108_c0_seq1
263bp
 PREDICTED:_uncharacterized_protein_LOC101745185,_partial_[Bombyx_mori]
GO:0001954 P positive regulation of cell-matrix adhesion
GO:0007155 P cell adhesion
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0042246 P tissue regeneration
GO:1990384 P hyaloid vascular plexus regression
12377 O_BomoEE2113_complete:A_BomoEE_comp33504_c0_seq1
127bp
 small_nuclear_ribonucleoprotein_Sm_D1_[Bombyx_mori]
GO:0000243 C commitment complex
GO:0000245 P spliceosomal complex assembly
GO:0000387 P spliceosomal snRNP assembly
GO:0000398 P mRNA splicing, via spliceosome
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0005682 C U5 snRNP
GO:0005685 C U1 snRNP
GO:0005686 C U2 snRNP
GO:0005687 C U4 snRNP
GO:0005689 C U12-type spliceosomal complex
GO:0005829 C cytosol
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0030529 C ribonucleoprotein complex
GO:0030532 C small nuclear ribonucleoprotein complex
GO:0034715 C pICln-Sm protein complex
GO:0034719 C SMN-Sm protein complex
GO:0044822 F RNA binding
GO:0071010 C prespliceosome
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
GO:0097526 C spliceosomal tri-snRNP complex
12378 O_BomoEE21140_complete:A_BomoEE_comp70108_c0_seq2
313bp
 PREDICTED:_uncharacterized_protein_LOC101745185,_partial_[Bombyx_mori]
GO:0001954 P positive regulation of cell-matrix adhesion
GO:0007155 P cell adhesion
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0042246 P tissue regeneration
GO:1990384 P hyaloid vascular plexus regression
12379 O_BomoEE21141_complete:A_BomoEE_comp70109_c0_seq1
418bp
 PREDICTED:_PDZ_domain-containing_protein_2-like_[Amyelois_transitella]
GO:0005576 C extracellular region
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005911 C cell-cell junction
GO:0007155 P cell adhesion
12380 O_BomoEE21142_complete:A_BomoEE_comp70109_c0_seq1
104bp
12381 O_BomoEE21143_complete:A_BomoEE_comp70109_c0_seq2
377bp
 PREDICTED:_PDZ_domain-containing_protein_2-like_[Amyelois_transitella]
GO:0005576 C extracellular region
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005911 C cell-cell junction
GO:0007155 P cell adhesion
12382 O_BomoEE21144_complete:A_BomoEE_comp70109_c0_seq2
104bp
12383 O_BomoEE21145_5prime_partial:A_BomoEE_comp70109_c0_seq3
398bp
 PREDICTED:_PDZ_domain-containing_protein_2-like_[Amyelois_transitella]
GO:0005576 C extracellular region
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005911 C cell-cell junction
GO:0007155 P cell adhesion
12384 O_BomoEE21146_complete:A_BomoEE_comp70109_c0_seq3
104bp
12385 O_BomoEE21147_complete:A_BomoEE_comp70109_c0_seq4
377bp
 PREDICTED:_PDZ_domain-containing_protein_2-like_[Amyelois_transitella]
GO:0005576 C extracellular region
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005911 C cell-cell junction
GO:0007155 P cell adhesion
12386 O_BomoEE21148_complete:A_BomoEE_comp70109_c0_seq4
104bp
12387 O_BomoEE21149_complete:A_BomoEE_comp70109_c0_seq5
418bp
 PREDICTED:_PDZ_domain-containing_protein_2-like_[Amyelois_transitella]
GO:0005576 C extracellular region
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005911 C cell-cell junction
GO:0007155 P cell adhesion
12388 O_BomoEE2114_complete:A_BomoEE_comp33506_c0_seq1
838bp
 acinus_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0002230 P positive regulation of defense response to virus by host
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006397 P mRNA processing
GO:0006915 P apoptotic process
GO:0006921 P cellular component disassembly involved in execution phase of apoptosis
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
GO:0016887 F ATP hydrolysis activity
GO:0019899 F enzyme binding
GO:0030218 P erythrocyte differentiation
GO:0030263 P apoptotic chromosome condensation
GO:0035145 C exon-exon junction complex
GO:0043065 P positive regulation of apoptotic process
GO:0044822 F RNA binding
GO:0045657 P positive regulation of monocyte differentiation
GO:0048025 P negative regulation of mRNA splicing, via spliceosome
GO:0061574 C ASAP complex
GO:0098779 P positive regulation of mitophagy in response to mitochondrial depolarization
GO:0098792 P xenophagy
12389 O_BomoEE21150_complete:A_BomoEE_comp70109_c0_seq5
104bp
12390 O_BomoEE21151_5prime_partial:A_BomoEE_comp70109_c0_seq8
357bp
 PREDICTED:_PDZ_domain-containing_protein_2-like_[Amyelois_transitella]
GO:0005576 C extracellular region
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005911 C cell-cell junction
GO:0007155 P cell adhesion
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