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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
12301 O_BomoEE21071_complete:A_BomoEE_comp70102_c0_seq24
118bp
12302 O_BomoEE21072_5prime_partial:A_BomoEE_comp70102_c0_seq24
107bp
12303 O_BomoEE21073_5prime_partial:A_BomoEE_comp70102_c0_seq26
1510bp
 PREDICTED:_dystonin-like_[Bombyx_mori]
GO:0003779 F actin binding
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005886 C plasma membrane
GO:0007050 P regulation of cell cycle
GO:0008017 F microtubule binding
GO:0008152 P metabolic process
GO:0010632 P regulation of epithelial cell migration
GO:0016020 C membrane
GO:0016055 P Wnt signaling pathway
GO:0016887 F ATP hydrolysis activity
GO:0030177 P positive regulation of Wnt signaling pathway
GO:0032587 C ruffle membrane
GO:0032886 P regulation of microtubule-based process
GO:0042060 P wound healing
GO:0042995 C cell projection
GO:0043001 P Golgi to plasma membrane protein transport
GO:0044822 F RNA binding
GO:0045773 P positive regulation of axon extension
GO:0046872 F metal ion binding
GO:0051015 F actin filament binding
GO:0051893 P regulation of focal adhesion assembly
12304 O_BomoEE21074_complete:A_BomoEE_comp70102_c0_seq26
392bp
12305 O_BomoEE21075_complete:A_BomoEE_comp70102_c0_seq26
223bp
12306 O_BomoEE21076_complete:A_BomoEE_comp70102_c0_seq26
213bp
12307 O_BomoEE21077_complete:A_BomoEE_comp70102_c0_seq26
185bp
12308 O_BomoEE21078_complete:A_BomoEE_comp70102_c0_seq26
118bp
12309 O_BomoEE21079_5prime_partial:A_BomoEE_comp70102_c0_seq26
107bp
12310 O_BomoEE2107_complete:A_BomoEE_comp33497_c0_seq1
180bp
 heterochromatin_protein_1beta-like_protein_[Bombyx_mori]
GO:0000118 C histone deacetylase complex
GO:0000775 C chromosome, centromeric region
GO:0000776 C kinetochore
GO:0000784 C chromosome, telomeric region
GO:0000792 C heterochromatin
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005720 C heterochromatin
GO:0005721 C pericentric heterochromatin
GO:0005730 C nucleolus
GO:0007596 P blood coagulation
GO:0010369 C chromocenter
GO:0016032 P viral process
GO:0016605 C PML body
GO:0017053 C transcription repressor complex
GO:0030674 F protein-macromolecule adaptor activity
GO:0031618 C pericentric heterochromatin
GO:0035064 F methylated histone binding
GO:0035097 C histone methyltransferase complex
GO:0042803 F protein homodimerization activity
GO:0042826 F histone deacetylase binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0070491 F DNA-binding transcription factor binding
12311 O_BomoEE21080_5prime_partial:A_BomoEE_comp70102_c0_seq28
1479bp
 PREDICTED:_dystonin-like_[Bombyx_mori]
GO:0003779 F actin binding
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005886 C plasma membrane
GO:0007050 P regulation of cell cycle
GO:0008017 F microtubule binding
GO:0008152 P metabolic process
GO:0010632 P regulation of epithelial cell migration
GO:0016020 C membrane
GO:0016055 P Wnt signaling pathway
GO:0016887 F ATP hydrolysis activity
GO:0030177 P positive regulation of Wnt signaling pathway
GO:0032587 C ruffle membrane
GO:0032886 P regulation of microtubule-based process
GO:0042060 P wound healing
GO:0042995 C cell projection
GO:0043001 P Golgi to plasma membrane protein transport
GO:0044822 F RNA binding
GO:0045773 P positive regulation of axon extension
GO:0046872 F metal ion binding
GO:0051015 F actin filament binding
GO:0051893 P regulation of focal adhesion assembly
12312 O_BomoEE21081_complete:A_BomoEE_comp70102_c0_seq28
392bp
12313 O_BomoEE21082_complete:A_BomoEE_comp70102_c0_seq28
223bp
12314 O_BomoEE21083_complete:A_BomoEE_comp70102_c0_seq28
213bp
12315 O_BomoEE21084_complete:A_BomoEE_comp70102_c0_seq28
185bp
12316 O_BomoEE21085_complete:A_BomoEE_comp70102_c0_seq28
118bp
12317 O_BomoEE21086_5prime_partial:A_BomoEE_comp70102_c0_seq28
107bp
12318 O_BomoEE21087_5prime_partial:A_BomoEE_comp70102_c0_seq29
1491bp
 PREDICTED:_dystonin-like_[Bombyx_mori]
GO:0003779 F actin binding
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005886 C plasma membrane
GO:0007050 P regulation of cell cycle
GO:0008017 F microtubule binding
GO:0008152 P metabolic process
GO:0010632 P regulation of epithelial cell migration
GO:0016020 C membrane
GO:0016055 P Wnt signaling pathway
GO:0016887 F ATP hydrolysis activity
GO:0030177 P positive regulation of Wnt signaling pathway
GO:0032587 C ruffle membrane
GO:0032886 P regulation of microtubule-based process
GO:0042060 P wound healing
GO:0042995 C cell projection
GO:0043001 P Golgi to plasma membrane protein transport
GO:0044822 F RNA binding
GO:0045773 P positive regulation of axon extension
GO:0046872 F metal ion binding
GO:0051015 F actin filament binding
GO:0051893 P regulation of focal adhesion assembly
12319 O_BomoEE21088_complete:A_BomoEE_comp70102_c0_seq29
392bp
12320 O_BomoEE21089_complete:A_BomoEE_comp70102_c0_seq29
223bp
12321 O_BomoEE2108_complete:A_BomoEE_comp33497_c0_seq1
100bp
12322 O_BomoEE21090_complete:A_BomoEE_comp70102_c0_seq29
213bp
12323 O_BomoEE21091_complete:A_BomoEE_comp70102_c0_seq29
185bp
12324 O_BomoEE21092_complete:A_BomoEE_comp70102_c0_seq29
118bp
12325 O_BomoEE21093_5prime_partial:A_BomoEE_comp70102_c0_seq29
107bp
12326 O_BomoEE21094_5prime_partial:A_BomoEE_comp70102_c0_seq30
1477bp
 PREDICTED:_dystonin-like_[Bombyx_mori]
GO:0003779 F actin binding
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005886 C plasma membrane
GO:0007050 P regulation of cell cycle
GO:0008017 F microtubule binding
GO:0008152 P metabolic process
GO:0010632 P regulation of epithelial cell migration
GO:0016020 C membrane
GO:0016055 P Wnt signaling pathway
GO:0016887 F ATP hydrolysis activity
GO:0030177 P positive regulation of Wnt signaling pathway
GO:0032587 C ruffle membrane
GO:0032886 P regulation of microtubule-based process
GO:0042060 P wound healing
GO:0042995 C cell projection
GO:0043001 P Golgi to plasma membrane protein transport
GO:0044822 F RNA binding
GO:0045773 P positive regulation of axon extension
GO:0046872 F metal ion binding
GO:0051015 F actin filament binding
GO:0051893 P regulation of focal adhesion assembly
12327 O_BomoEE21095_complete:A_BomoEE_comp70102_c0_seq30
392bp
12328 O_BomoEE21096_complete:A_BomoEE_comp70102_c0_seq30
223bp
12329 O_BomoEE21097_complete:A_BomoEE_comp70102_c0_seq30
185bp
12330 O_BomoEE21098_complete:A_BomoEE_comp70102_c0_seq30
118bp
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