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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
61 O_BomaMSG10055_internal:A_BomaMSG_c21200_g1_i1
171bp
sericin_2_isoform_1_precursor_[Bombyx_mori]
62 O_BomaMSG10056_internal:A_BomaMSG_c21200_g1_i2
644bp
sericin_2_isoform_1_precursor_[Bombyx_mori]
63 O_BomaMSG10057_complete:A_BomaMSG_c21200_g1_i2
116bp
64 O_BomaMSG10058_complete:A_BomaMSG_c21200_g1_i2
116bp
65 O_BomaMSG10059_complete:A_BomaMSG_c21200_g1_i2
102bp
66 O_BomaMSG1005_internal:A_BomaMSG_c4336_g1_i1
104bp
LOW_QUALITY_PROTEIN:_neurobeachin_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0007528 P neuromuscular junction development
GO:0007614 P short-term memory
GO:0008104 P protein localization
GO:0008355 P olfactory learning
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016319 P mushroom body development
GO:0042462 P eye photoreceptor cell development
GO:0042675 P compound eye cone cell differentiation
GO:0043025 C neuronal cell body
GO:0043204 C perikaryon
GO:0051018 F protein kinase A binding
67 O_BomaMSG10060_5prime_partial:A_BomaMSG_c21200_g1_i3
258bp
sericin_2_isoform_2_precursor_[Bombyx_mori]
68 O_BomaMSG10061_5prime_partial:A_BomaMSG_c21200_g1_i4
676bp
sericin_2_isoform_2_precursor_[Bombyx_mori]
69 O_BomaMSG10062_complete:A_BomaMSG_c21200_g1_i4
116bp
70 O_BomaMSG10063_complete:A_BomaMSG_c21200_g1_i4
102bp
71 O_BomaMSG10064_internal:A_BomaMSG_c21200_g1_i5
633bp
sericin_2_isoform_1_precursor_[Bombyx_mori]
72 O_BomaMSG10065_complete:A_BomaMSG_c21200_g1_i5
116bp
73 O_BomaMSG10066_complete:A_BomaMSG_c21200_g1_i5
116bp
74 O_BomaMSG10067_complete:A_BomaMSG_c21200_g1_i5
102bp
75 O_BomaMSG10068_5prime_partial:A_BomaMSG_c21200_g1_i6
243bp
sericin_2_isoform_2_precursor_[Bombyx_mori]
76 O_BomaMSG10069_internal:A_BomaMSG_c21203_g1_i1
392bp
RB1-inducible_coiled-coil_protein_1_isoform_X2_[Bombyx_mori]
GO:0000045 P autophagosome assembly
GO:0000407 C phagophore assembly site
GO:0001889 P liver development
GO:0001934 P positive regulation of protein phosphorylation
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006914 P autophagy
GO:0007049 P cell cycle
GO:0007254 P JNK cascade
GO:0007507 P heart development
GO:0010506 P regulation of autophagy
GO:0016236 P macroautophagy
GO:0019901 F protein kinase binding
GO:0031965 C nuclear membrane
GO:0034045 C phagophore assembly site membrane
GO:0043066 P negative regulation of apoptotic process
GO:0045793 P positive regulation of cell size
GO:1990316 C Atg1/ULK1 kinase complex
GO:2001237 P negative regulation of extrinsic apoptotic signaling pathway
77 O_BomaMSG1006_internal:A_BomaMSG_c4340_g1_i1
103bp
PREDICTED:_LOW_QUALITY_PROTEIN:_exportin-6-like_[Papilio_machaon]
78 O_BomaMSG10070_complete:A_BomaMSG_c21203_g1_i1
229bp
79 O_BomaMSG10071_5prime_partial:A_BomaMSG_c21204_g1_i1
200bp
protein_suppressor_of_sable_isoform_X2_[Bombyx_mori]
80 O_BomaMSG10072_3prime_partial:A_BomaMSG_c21205_g1_i1
275bp
enhancer_of_mRNA-decapping_protein_3_[Bombyx_mori]
GO:0000932 C P-body
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005737 C cytoplasm
GO:0031087 P deadenylation-independent decapping of nuclear-transcribed mRNA
GO:0033962 P P-body assembly
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
GO:1990174 F phosphodiesterase decapping endonuclease activity
81 O_BomaMSG10073_3prime_partial:A_BomaMSG_c21206_g1_i1
274bp
syndetin_[Bombyx_mori]
GO:0000149 F SNARE binding
GO:0005768 C endosome
GO:0006810 P transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0032456 P endocytic recycling
GO:0042147 P retrograde transport, endosome to Golgi
GO:0055037 C recycling endosome
GO:0070062 C extracellular exosome
GO:1990745 C EARP complex
82 O_BomaMSG10074_3prime_partial:A_BomaMSG_c21206_g1_i2
274bp
syndetin_[Bombyx_mori]
GO:0000149 F SNARE binding
GO:0005768 C endosome
GO:0006810 P transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0032456 P endocytic recycling
GO:0042147 P retrograde transport, endosome to Golgi
GO:0055037 C recycling endosome
GO:0070062 C extracellular exosome
GO:1990745 C EARP complex
83 O_BomaMSG10075_complete:A_BomaMSG_c21207_g1_i1
179bp
juvenile_hormone_esterase_binding_protein_[Bombyx_mori]
GO:0005739 C mitochondrion
84 O_BomaMSG10076_3prime_partial:A_BomaMSG_c21207_g1_i2
232bp
juvenile_hormone_esterase_binding_protein_[Bombyx_mori]
GO:0005739 C mitochondrion
85 O_BomaMSG10077_5prime_partial:A_BomaMSG_c21208_g1_i1
247bp
neuronal_membrane_glycoprotein_M6-b_[Bombyx_mori]
GO:0001503 P ossification
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030501 P positive regulation of bone mineralization
GO:0032956 P regulation of actin cytoskeleton organization
GO:0045121 C membrane raft
GO:0051612 P negative regulation of serotonin uptake
GO:0051893 P regulation of focal adhesion assembly
GO:0085029 P extracellular matrix assembly
GO:2000009 P negative regulation of protein localization to cell surface
86 O_BomaMSG10078_complete:A_BomaMSG_c21208_g1_i1
120bp
87 O_BomaMSG10079_5prime_partial:A_BomaMSG_c21208_g1_i2
170bp
neuronal_membrane_glycoprotein_M6-b_[Bombyx_mori]
GO:0001503 P ossification
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030501 P positive regulation of bone mineralization
GO:0032956 P regulation of actin cytoskeleton organization
GO:0045121 C membrane raft
GO:0051612 P negative regulation of serotonin uptake
GO:0051893 P regulation of focal adhesion assembly
GO:0085029 P extracellular matrix assembly
GO:2000009 P negative regulation of protein localization to cell surface
88 O_BomaMSG1007_internal:A_BomaMSG_c4347_g1_i1
144bp
protein_real-time_isoform_X3_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005739 C mitochondrion
GO:0006810 P transport
GO:0008150 P biological_process
GO:0016021 C integral component of membrane
89 O_BomaMSG10080_5prime_partial:A_BomaMSG_c21208_g1_i2
108bp
90 O_BomaMSG10081_5prime_partial:A_BomaMSG_c21208_g1_i3
192bp
neuronal_membrane_glycoprotein_M6-b_[Bombyx_mori]
GO:0001503 P ossification
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030501 P positive regulation of bone mineralization
GO:0032956 P regulation of actin cytoskeleton organization
GO:0045121 C membrane raft
GO:0051612 P negative regulation of serotonin uptake
GO:0051893 P regulation of focal adhesion assembly
GO:0085029 P extracellular matrix assembly
GO:2000009 P negative regulation of protein localization to cell surface
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