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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
91 O_BomaMSG10082_5prime_partial:A_BomaMSG_c21208_g1_i3
129bp
92 O_BomaMSG10083_5prime_partial:A_BomaMSG_c21209_g1_i1
160bp
cytoplasmic_FMR1-interacting_protein_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0007411 P axon guidance
GO:0008360 P regulation of cell shape
GO:0022416 P chaeta development
GO:0030031 P cell projection assembly
GO:0030154 P cell differentiation
GO:0030866 P cortical actin cytoskeleton organization
GO:0031209 C SCAR complex
GO:0050807 P regulation of synapse organization
93 O_BomaMSG10084_5prime_partial:A_BomaMSG_c21209_g1_i1
103bp
94 O_BomaMSG10085_5prime_partial:A_BomaMSG_c21209_g2_i1
149bp
centaurin-gamma-1A_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005096 F GTPase activator activity
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0007165 P signal transduction
GO:0007264 P small GTPase mediated signal transduction
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0043087 P regulation of GTPase activity
GO:0043547 P positive regulation of GTPase activity
GO:0046872 F metal ion binding
GO:0072375 P medium-term memory
95 O_BomaMSG10086_internal:A_BomaMSG_c21210_g1_i1
420bp
HPO_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004702 F obsolete signal transducer, downstream of receptor, with serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0006915 P apoptotic process
GO:0007165 P signal transduction
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0023014 P signal transduction
GO:0035329 P hippo signaling
GO:0046872 F metal ion binding
96 O_BomaMSG10087_5prime_partial:A_BomaMSG_c21210_g1_i1
227bp
97 O_BomaMSG10088_5prime_partial:A_BomaMSG_c21210_g1_i1
178bp
98 O_BomaMSG10089_complete:A_BomaMSG_c21210_g1_i1
154bp
hypothetical_protein_A2W03_05455_[Candidatus_Aminicenantes_bacterium_RBG_16_63_16]
99 O_BomaMSG1008_internal:A_BomaMSG_c4355_g1_i1
121bp
LOW_QUALITY_PROTEIN:_notch-like_protein_isoform_X1_[Bombyx_mori]
100 O_BomaMSG10090_complete:A_BomaMSG_c21210_g1_i1
121bp
Uncharacterized_protein_TCM_031939_[Theobroma_cacao]
101 O_BomaMSG10091_3prime_partial:A_BomaMSG_c21211_g1_i1
244bp
probable_28S_rRNA_(cytosine-C(5))-methyltransferase_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0008150 P biological_process
GO:0008168 F methyltransferase activity
GO:0016740 F transferase activity
GO:0032259 P methylation
GO:0044822 F RNA binding
102 O_BomaMSG10092_3prime_partial:A_BomaMSG_c21211_g1_i3
112bp
unknown_unsecreted_protein_[Papilio_xuthus]
GO:0003674 F molecular_function
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0012507 C ER to Golgi transport vesicle membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030127 C COPII vesicle coat
GO:0031410 C cytoplasmic vesicle
GO:0033116 C endoplasmic reticulum-Golgi intermediate compartment membrane
GO:0070072 P vacuolar proton-transporting V-type ATPase complex assembly
103 O_BomaMSG10093_complete:A_BomaMSG_c21213_g1_i1
205bp
uncharacterized_protein_LOC110385656_[Bombyx_mori]
104 O_BomaMSG10094_complete:A_BomaMSG_c21213_g1_i1
141bp
105 O_BomaMSG10095_5prime_partial:A_BomaMSG_c21213_g1_i4
129bp
uncharacterized_protein_LOC110385656_[Bombyx_mori]
106 O_BomaMSG10096_3prime_partial:A_BomaMSG_c21213_g1_i4
123bp
107 O_BomaMSG10097_complete:A_BomaMSG_c21213_g1_i5
205bp
uncharacterized_protein_LOC110385656_[Bombyx_mori]
108 O_BomaMSG10098_complete:A_BomaMSG_c21213_g1_i5
141bp
109 O_BomaMSG10099_3prime_partial:A_BomaMSG_c21214_g1_i1
184bp
protein_pigeon_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
110 O_BomaMSG1009_internal:A_BomaMSG_c4364_g1_i2
99bp
uncharacterized_protein_LOC101735755_isoform_X2_[Bombyx_mori]
GO:0000209 P protein polyubiquitination
GO:0004176 F ATP-dependent peptidase activity
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005829 C cytosol
GO:0006508 P proteolysis
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
111 O_BomaMSG100_internal:A_BomaMSG_c496_g1_i1
286bp
uncharacterized_protein_LOC101737620_isoform_X1_[Bombyx_mori]
112 O_BomaMSG10100_3prime_partial:A_BomaMSG_c21214_g1_i2
184bp
protein_pigeon_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
113 O_BomaMSG10101_5prime_partial:A_BomaMSG_c21217_g1_i1
218bp
U4/U6.U5_tri-snRNP-associated_protein_1_isoform_X2_[Bombyx_mori]
GO:0000387 P spliceosomal snRNP assembly
GO:0000398 P mRNA splicing, via spliceosome
GO:0000481 P maturation of 5S rRNA
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0006397 P mRNA processing
GO:0007050 P regulation of cell cycle
GO:0008380 P RNA splicing
GO:0015030 C Cajal body
GO:0044822 F RNA binding
GO:0045292 P mRNA cis splicing, via spliceosome
GO:0045585 P positive regulation of cytotoxic T cell differentiation
GO:0046540 C U4/U6 x U5 tri-snRNP complex
GO:0071013 C catalytic step 2 spliceosome
GO:0097193 P intrinsic apoptotic signaling pathway
114 O_BomaMSG10102_5prime_partial:A_BomaMSG_c21217_g1_i1
159bp
115 O_BomaMSG10103_5prime_partial:A_BomaMSG_c21217_g1_i1
145bp
116 O_BomaMSG10104_internal:A_BomaMSG_c21217_g1_i2
337bp
U4/U6.U5_tri-snRNP-associated_protein_1_isoform_X1_[Bombyx_mori]
GO:0000387 P spliceosomal snRNP assembly
GO:0000398 P mRNA splicing, via spliceosome
GO:0000481 P maturation of 5S rRNA
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005794 C Golgi apparatus
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0015030 C Cajal body
GO:0044822 F RNA binding
GO:0045292 P mRNA cis splicing, via spliceosome
GO:0045585 P positive regulation of cytotoxic T cell differentiation
GO:0046540 C U4/U6 x U5 tri-snRNP complex
GO:0071013 C catalytic step 2 spliceosome
117 O_BomaMSG10105_5prime_partial:A_BomaMSG_c21217_g1_i2
300bp
118 O_BomaMSG10106_5prime_partial:A_BomaMSG_c21217_g1_i2
188bp
119 O_BomaMSG10107_5prime_partial:A_BomaMSG_c21217_g1_i3
181bp
U4/U6.U5_tri-snRNP-associated_protein_1_isoform_X2_[Bombyx_mori]
GO:0000387 P spliceosomal snRNP assembly
GO:0000398 P mRNA splicing, via spliceosome
GO:0000481 P maturation of 5S rRNA
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0006397 P mRNA processing
GO:0007050 P regulation of cell cycle
GO:0008380 P RNA splicing
GO:0015030 C Cajal body
GO:0044822 F RNA binding
GO:0045292 P mRNA cis splicing, via spliceosome
GO:0045585 P positive regulation of cytotoxic T cell differentiation
GO:0046540 C U4/U6 x U5 tri-snRNP complex
GO:0071013 C catalytic step 2 spliceosome
GO:0097193 P intrinsic apoptotic signaling pathway
120 O_BomaMSG10108_5prime_partial:A_BomaMSG_c21217_g1_i3
159bp
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