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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
2251 O_BomaMSG12026_internal:A_BomaMSG_c22346_g1_i1
211bp
myb-like_protein_I_isoform_X7_[Bombyx_mori]
GO:0000086 P G2/M transition of mitotic cell cycle
GO:0000242 C pericentriolar material
GO:0001764 P neuron migration
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005814 C centriole
GO:0005815 C microtubule organizing center
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0016020 C membrane
GO:0022027 P interkinetic nuclear migration
GO:0030030 P cell projection organization
GO:0031122 P cytoplasmic microtubule organization
GO:0031513 C non-motile cilium
GO:0031965 C nuclear membrane
GO:0034451 C centriolar satellite
GO:0034453 P microtubule anchoring
GO:0034454 P microtubule anchoring at centrosome
GO:0035058 P non-motile cilium assembly
GO:0035735 P intraciliary transport involved in cilium assembly
GO:0036064 C ciliary basal body
GO:0042384 P cilium assembly
GO:0042802 F identical protein binding
GO:0042995 C cell projection
GO:0043234 C protein-containing complex
GO:0050768 P negative regulation of neurogenesis
GO:0051297 P centrosome cycle
GO:0071539 P protein localization to centrosome
GO:0090316 P positive regulation of intracellular protein transport
GO:0097150 P neuronal stem cell population maintenance
2252 O_BomaMSG12027_complete:A_BomaMSG_c22346_g1_i1
100bp
2253 O_BomaMSG12028_internal:A_BomaMSG_c22346_g1_i2
296bp
pericentriolar_material_1_protein_isoform_X5_[Bombyx_mori]
GO:0000086 P G2/M transition of mitotic cell cycle
GO:0000242 C pericentriolar material
GO:0001764 P neuron migration
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005814 C centriole
GO:0005815 C microtubule organizing center
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0016020 C membrane
GO:0022027 P interkinetic nuclear migration
GO:0030030 P cell projection organization
GO:0031122 P cytoplasmic microtubule organization
GO:0031513 C non-motile cilium
GO:0031965 C nuclear membrane
GO:0034451 C centriolar satellite
GO:0034453 P microtubule anchoring
GO:0034454 P microtubule anchoring at centrosome
GO:0035058 P non-motile cilium assembly
GO:0035735 P intraciliary transport involved in cilium assembly
GO:0036064 C ciliary basal body
GO:0042384 P cilium assembly
GO:0042802 F identical protein binding
GO:0042995 C cell projection
GO:0043234 C protein-containing complex
GO:0050768 P negative regulation of neurogenesis
GO:0051297 P centrosome cycle
GO:0071539 P protein localization to centrosome
GO:0090316 P positive regulation of intracellular protein transport
GO:0097150 P neuronal stem cell population maintenance
2254 O_BomaMSG12029_complete:A_BomaMSG_c22346_g1_i2
100bp
2255 O_BomaMSG1202_complete:A_BomaMSG_c5024_g1_i1
107bp
mitochondrial_ATP_synthase_coupling_factor_6_[Bombyx_mori]
GO:0000276 C mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005756 C mitochondrial proton-transporting ATP synthase, central stalk
GO:0006810 P transport
GO:0006811 P ion transport
GO:0015078 F proton transmembrane transporter activity
GO:0015986 P ATP synthesis coupled proton transport
GO:0015992 P proton transmembrane transport
GO:0016020 C membrane
GO:0016887 F ATP hydrolysis activity
GO:0045263 C proton-transporting ATP synthase complex, coupling factor F(o)
GO:0046331 P lateral inhibition
2256 O_BomaMSG12030_5prime_partial:A_BomaMSG_c22347_g1_i2
104bp
2257 O_BomaMSG12031_internal:A_BomaMSG_c22349_g1_i1
258bp
hypothetical_protein_[Escherichia_coli]
2258 O_BomaMSG12032_internal:A_BomaMSG_c22350_g1_i1
308bp
KAT8_regulatory_NSL_complex_subunit_2_isoform_X1_[Bombyx_mori]
GO:0000123 C histone acetyltransferase complex
GO:0005634 C nucleus
GO:0016568 P chromatin organization
GO:0043981 P histone H4-K5 acetylation
GO:0043982 P histone H4-K8 acetylation
GO:0043984 P histone H4-K16 acetylation
GO:0043995 F histone acetyltransferase activity (H4-K5 specific)
GO:0043996 F histone acetyltransferase activity (H4-K8 specific)
GO:0044545 C NSL complex
GO:0046972 F histone acetyltransferase activity (H4-K16 specific)
2259 O_BomaMSG12033_3prime_partial:A_BomaMSG_c22350_g1_i2
184bp
KAT8_regulatory_NSL_complex_subunit_2_isoform_X2_[Bombyx_mori]
GO:0000123 C histone acetyltransferase complex
GO:0005634 C nucleus
GO:0016568 P chromatin organization
GO:0043981 P histone H4-K5 acetylation
GO:0043982 P histone H4-K8 acetylation
GO:0043984 P histone H4-K16 acetylation
GO:0043995 F histone acetyltransferase activity (H4-K5 specific)
GO:0043996 F histone acetyltransferase activity (H4-K8 specific)
GO:0044545 C NSL complex
GO:0046972 F histone acetyltransferase activity (H4-K16 specific)
2260 O_BomaMSG12034_internal:A_BomaMSG_c22351_g1_i1
342bp
uncharacterized_protein_LOC101736214_[Bombyx_mori]
2261 O_BomaMSG12035_5prime_partial:A_BomaMSG_c22351_g1_i2
102bp
uncharacterized_protein_LOC101735648_[Bombyx_mori]
2262 O_BomaMSG12036_internal:A_BomaMSG_c22351_g1_i3
367bp
uncharacterized_protein_LOC101736214_[Bombyx_mori]
2263 O_BomaMSG12037_complete:A_BomaMSG_c22352_g1_i1
137bp
uncharacterized_protein_LOC101738609_isoform_X1_[Bombyx_mori]
2264 O_BomaMSG12038_3prime_partial:A_BomaMSG_c22353_g1_i1
180bp
uncharacterized_protein_C6orf203_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005739 C mitochondrion
GO:0008150 P biological_process
2265 O_BomaMSG12039_5prime_partial:A_BomaMSG_c22354_g1_i2
303bp
uncharacterized_protein_LOC110385892_[Bombyx_mori]
2266 O_BomaMSG1203_internal:A_BomaMSG_c5025_g1_i1
114bp
2267 O_BomaMSG12040_5prime_partial:A_BomaMSG_c22354_g1_i3
303bp
uncharacterized_protein_LOC110385892_[Bombyx_mori]
2268 O_BomaMSG12041_internal:A_BomaMSG_c22357_g1_i1
171bp
28S_ribosomal_protein_S29,_mitochondrial_isoform_X2_[Bombyx_mori]
GO:0003735 F structural constituent of ribosome
GO:0005654 C nucleoplasm
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005761 C mitochondrial ribosome
GO:0005763 C mitochondrial small ribosomal subunit
GO:0005840 C ribosome
GO:0006915 P apoptotic process
GO:0015935 C small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0032543 P mitochondrial translation
GO:0044822 F RNA binding
GO:0070124 P mitochondrial translational initiation
GO:0070125 P mitochondrial translational elongation
2269 O_BomaMSG12042_3prime_partial:A_BomaMSG_c22357_g1_i2
325bp
28S_ribosomal_protein_S29,_mitochondrial_isoform_X1_[Bombyx_mori]
GO:0003735 F structural constituent of ribosome
GO:0005654 C nucleoplasm
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005761 C mitochondrial ribosome
GO:0005763 C mitochondrial small ribosomal subunit
GO:0005840 C ribosome
GO:0006915 P apoptotic process
GO:0015935 C small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0032543 P mitochondrial translation
GO:0044822 F RNA binding
GO:0070124 P mitochondrial translational initiation
GO:0070125 P mitochondrial translational elongation
2270 O_BomaMSG12043_complete:A_BomaMSG_c22360_g1_i1
203bp
steroid_receptor_RNA_activator_1_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003712 F transcription coregulator activity
GO:0003713 F transcription coactivator activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005667 C transcription regulator complex
GO:0005737 C cytoplasm
GO:0005831 C steroid hormone aporeceptor complex
GO:0005886 C plasma membrane
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006915 P apoptotic process
GO:0008283 P cell population proliferation
GO:0010861 F obsolete thyroid hormone receptor coactivator activity
GO:0015630 C microtubule cytoskeleton
GO:0030154 P cell differentiation
GO:0030374 F nuclear receptor coactivator activity
GO:0030529 C ribonucleoprotein complex
GO:0031252 C cell leading edge
GO:0042981 P regulation of apoptotic process
GO:0045171 C intercellular bridge
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:2000273 P positive regulation of signaling receptor activity
2271 O_BomaMSG12044_5prime_partial:A_BomaMSG_c22362_g1_i1
509bp
nuclear_factor_of_activated_T-cells_5_isoform_X2_[Bombyx_mori]
2272 O_BomaMSG12045_complete:A_BomaMSG_c22362_g1_i1
167bp
2273 O_BomaMSG12046_complete:A_BomaMSG_c22362_g1_i1
124bp
2274 O_BomaMSG12047_complete:A_BomaMSG_c22362_g1_i1
106bp
2275 O_BomaMSG12048_5prime_partial:A_BomaMSG_c22362_g1_i2
251bp
2276 O_BomaMSG12049_5prime_partial:A_BomaMSG_c22362_g1_i2
231bp
nuclear_factor_of_activated_T-cells_5_isoform_X4_[Bombyx_mori]
2277 O_BomaMSG1204_internal:A_BomaMSG_c5025_g1_i1
114bp
sorting_nexin-25_isoform_X2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005768 C endosome
GO:0006810 P transport
GO:0010008 C endosome membrane
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0030512 P negative regulation of transforming growth factor beta receptor signaling pathway
GO:0032801 P receptor catabolic process
GO:0034713 F type I transforming growth factor beta receptor binding
GO:0035091 F phosphatidylinositol binding
GO:0060394 P negative regulation of pathway-restricted SMAD protein phosphorylation
2278 O_BomaMSG12050_complete:A_BomaMSG_c22362_g1_i2
106bp
2279 O_BomaMSG12051_complete:A_BomaMSG_c22363_g1_i2
105bp
2280 O_BomaMSG12052_complete:A_BomaMSG_c22364_g1_i1
144bp
uncharacterized_protein_LOC110386052_[Bombyx_mori]
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