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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
2281 O_BomaMSG12053_complete:A_BomaMSG_c22364_g1_i1
105bp
2282 O_BomaMSG12054_3prime_partial:A_BomaMSG_c22365_g1_i1
100bp
NAD-dependent_protein_deacylase_Sirt4_[Bombyx_mori]
GO:0000820 P regulation of glutamine family amino acid metabolic process
GO:0003950 F NAD+ ADP-ribosyltransferase activity
GO:0005515 F protein binding
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005759 C mitochondrial matrix
GO:0006471 P protein ADP-ribosylation
GO:0006541 P glutamine metabolic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0010667 P negative regulation of cardiac muscle cell apoptotic process
GO:0016740 F transferase activity
GO:0016787 F hydrolase activity
GO:0034979 F NAD-dependent protein deacetylase activity
GO:0034983 P peptidyl-lysine deacetylation
GO:0046322 P negative regulation of fatty acid oxidation
GO:0046676 P negative regulation of insulin secretion
GO:0046872 F metal ion binding
GO:0046889 P positive regulation of lipid biosynthetic process
GO:0047708 F biotinidase activity
GO:0061690 F lipoamidase activity
GO:0070403 F NAD+ binding
GO:0071456 P cellular response to hypoxia
GO:0072350 P tricarboxylic acid metabolic process
GO:1903217 P negative regulation of protein processing involved in protein targeting to mitochondrion
GO:1904182 P regulation of pyruvate dehydrogenase activity
2283 O_BomaMSG12055_internal:A_BomaMSG_c22365_g1_i2
180bp
NAD-dependent_protein_deacylase_Sirt4_[Bombyx_mori]
GO:0004407 F histone deacetylase activity
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0016575 P histone deacetylation
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0070403 F NAD+ binding
2284 O_BomaMSG12056_complete:A_BomaMSG_c22370_g1_i1
103bp
2285 O_BomaMSG12057_3prime_partial:A_BomaMSG_c22373_g1_i1
261bp
uncharacterized_protein_LOC101744940_[Bombyx_mori]
2286 O_BomaMSG12058_complete:A_BomaMSG_c22374_g1_i2
109bp
protein_NYNRIN_isoform_X2_[Bombyx_mori]
GO:0000932 C P-body
GO:0003674 F molecular_function
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006402 P mRNA catabolic process
GO:0016787 F hydrolase activity
GO:0030308 P negative regulation of cell growth
GO:0042130 P negative regulation of T cell proliferation
GO:0046872 F metal ion binding
GO:0061158 P 3'-UTR-mediated mRNA destabilization
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:2000134 P negative regulation of G1/S transition of mitotic cell cycle
2287 O_BomaMSG12059_5prime_partial:A_BomaMSG_c22374_g1_i3
361bp
protein_NYNRIN_isoform_X2_[Bombyx_mori]
GO:0000932 C P-body
GO:0003674 F molecular_function
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006402 P mRNA catabolic process
GO:0016787 F hydrolase activity
GO:0030308 P negative regulation of cell growth
GO:0042130 P negative regulation of T cell proliferation
GO:0046872 F metal ion binding
GO:0061158 P 3'-UTR-mediated mRNA destabilization
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:2000134 P negative regulation of G1/S transition of mitotic cell cycle
2288 O_BomaMSG1205_internal:A_BomaMSG_c5033_g1_i1
103bp
uncharacterized_protein_LOC101735710_isoform_X1_[Bombyx_mori]
2289 O_BomaMSG12060_complete:A_BomaMSG_c22376_g1_i1
661bp
long-chain_fatty_acid_transport_protein_1_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001579 P medium-chain fatty acid transport
GO:0001676 P long-chain fatty acid metabolic process
GO:0003824 F catalytic activity
GO:0004467 F long-chain fatty acid-CoA ligase activity
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005783 C endoplasmic reticulum
GO:0005886 C plasma membrane
GO:0005901 C caveola
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006646 P phosphatidylethanolamine biosynthetic process
GO:0006654 P phosphatidic acid biosynthetic process
GO:0006655 P phosphatidylglycerol biosynthetic process
GO:0006656 P phosphatidylcholine biosynthetic process
GO:0006659 P phosphatidylserine biosynthetic process
GO:0006661 P phosphatidylinositol biosynthetic process
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0008152 P metabolic process
GO:0009409 P response to cold
GO:0012505 C endomembrane system
GO:0015245 F fatty acid transmembrane transporter activity
GO:0015908 P fatty acid transport
GO:0015909 P long-chain fatty acid transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016874 F ligase activity
GO:0031652 P positive regulation of heat generation
GO:0031957 F very long-chain fatty acid-CoA ligase activity
GO:0032049 P cardiolipin biosynthetic process
GO:0032868 P response to insulin
GO:0033211 P adiponectin-activated signaling pathway
GO:0042803 F protein homodimerization activity
GO:0043231 C intracellular membrane-bounded organelle
GO:0071072 P negative regulation of phospholipid biosynthetic process
GO:0071902 P positive regulation of protein serine/threonine kinase activity
2290 O_BomaMSG12061_3prime_partial:A_BomaMSG_c22377_g1_i1
154bp
Fizzy-related_protein-like_[Papilio_machaon]
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0005680 C anaphase-promoting complex
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0008284 P positive regulation of cell population proliferation
GO:0010997 F anaphase-promoting complex binding
GO:0016567 P protein ubiquitination
GO:0031145 P anaphase-promoting complex-dependent catabolic process
GO:0031572 P mitotic G2 DNA damage checkpoint signaling
GO:0031965 C nuclear membrane
GO:0040020 P regulation of meiotic nuclear division
GO:0045732 P positive regulation of protein catabolic process
GO:0051301 P cell division
GO:0051488 P positive regulation of ubiquitin protein ligase activity
GO:0070306 P lens fiber cell differentiation
GO:0090344 P negative regulation of cell aging
GO:0097027 F ubiquitin-protein transferase activator activity
2291 O_BomaMSG12062_internal:A_BomaMSG_c22377_g1_i2
431bp
fizzy-related_protein_homolog_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0005680 C anaphase-promoting complex
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0008284 P positive regulation of cell population proliferation
GO:0010997 F anaphase-promoting complex binding
GO:0016567 P protein ubiquitination
GO:0031145 P anaphase-promoting complex-dependent catabolic process
GO:0031572 P mitotic G2 DNA damage checkpoint signaling
GO:0031965 C nuclear membrane
GO:0040020 P regulation of meiotic nuclear division
GO:0045732 P positive regulation of protein catabolic process
GO:0051301 P cell division
GO:0051488 P positive regulation of ubiquitin protein ligase activity
GO:0070306 P lens fiber cell differentiation
GO:0090344 P negative regulation of cell aging
GO:0097027 F ubiquitin-protein transferase activator activity
2292 O_BomaMSG12063_complete:A_BomaMSG_c22378_g1_i1
317bp
heterogeneous_nuclear_ribonucleoprotein_A1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0030529 C ribonucleoprotein complex
2293 O_BomaMSG12064_complete:A_BomaMSG_c22378_g1_i1
121bp
2294 O_BomaMSG12065_complete:A_BomaMSG_c22378_g1_i3
317bp
heterogeneous_nuclear_ribonucleoprotein_A1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0030529 C ribonucleoprotein complex
2295 O_BomaMSG12066_complete:A_BomaMSG_c22378_g1_i3
121bp
2296 O_BomaMSG12067_internal:A_BomaMSG_c22380_g1_i1
206bp
serine/threonine-protein_kinase_SIK2_[Bombyx_mori]
2297 O_BomaMSG12068_internal:A_BomaMSG_c22380_g1_i2
156bp
serine/threonine-protein_kinase_SIK2_[Bombyx_mori]
2298 O_BomaMSG12069_internal:A_BomaMSG_c22380_g1_i4
333bp
serine/threonine-protein_kinase_SIK2_[Bombyx_mori]
2299 O_BomaMSG1206_5prime_partial:A_BomaMSG_c5035_g1_i1
141bp
talin-1_isoform_X8_[Helicoverpa_armigera]
GO:0001726 C ruffle
GO:0002576 P platelet degranulation
GO:0003779 F actin binding
GO:0005178 F integrin binding
GO:0005200 F structural constituent of cytoskeleton
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005911 C cell-cell junction
GO:0005925 C focal adhesion
GO:0006928 P movement of cell or subcellular component
GO:0006936 P muscle contraction
GO:0007016 P obsolete cytoskeletal anchoring at plasma membrane
GO:0007043 P cell-cell junction assembly
GO:0007044 P cell-substrate junction assembly
GO:0007155 P cell adhesion
GO:0009986 C cell surface
GO:0016020 C membrane
GO:0016032 P viral process
GO:0017166 F vinculin binding
GO:0030054 C cell junction
GO:0030274 F LIM domain binding
GO:0030866 P cortical actin cytoskeleton organization
GO:0032403 F protein-containing complex binding
GO:0032587 C ruffle membrane
GO:0036498 P IRE1-mediated unfolded protein response
GO:0042995 C cell projection
GO:0051015 F actin filament binding
GO:0070062 C extracellular exosome
GO:0070527 P platelet aggregation
2300 O_BomaMSG12070_internal:A_BomaMSG_c22381_g1_i2
691bp
protein_toll_isoform_X2_[Bombyx_mori]
GO:0000281 P mitotic cytokinesis
GO:0002229 P defense response to oomycetes
GO:0002376 P immune system process
GO:0004888 F transmembrane signaling receptor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005769 C early endosome
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006952 P defense response
GO:0006955 P immune response
GO:0006963 P positive regulation of antibacterial peptide biosynthetic process
GO:0006967 P positive regulation of antifungal peptide biosynthetic process
GO:0007155 P cell adhesion
GO:0007165 P signal transduction
GO:0007275 P multicellular organism development
GO:0007352 P zygotic specification of dorsal/ventral axis
GO:0007416 P synapse assembly
GO:0007507 P heart development
GO:0008063 P Toll signaling pathway
GO:0009617 P response to bacterium
GO:0009620 P response to fungus
GO:0009880 P embryonic pattern specification
GO:0009897 C external side of plasma membrane
GO:0009950 P dorsal/ventral axis specification
GO:0009986 C cell surface
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016201 P synaptic target inhibition
GO:0019730 P antimicrobial humoral response
GO:0019732 P antifungal humoral response
GO:0019955 F cytokine binding
GO:0030097 P hemopoiesis
GO:0032154 C cleavage furrow
GO:0035007 P regulation of melanization defense response
GO:0035172 P hemocyte proliferation
GO:0042802 F identical protein binding
GO:0043234 C protein-containing complex
GO:0045087 P innate immune response
GO:0045610 P regulation of hemocyte differentiation
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0050830 P defense response to Gram-positive bacterium
GO:0050832 P defense response to fungus
GO:0070976 F TIR domain binding
GO:1902875 P regulation of embryonic pattern specification
2301 O_BomaMSG12071_complete:A_BomaMSG_c22381_g1_i2
110bp
2302 O_BomaMSG12072_5prime_partial:A_BomaMSG_c22383_g1_i1
149bp
probable_palmitoyltransferase_ZDHHC24_[Bombyx_mori]
GO:0008152 P metabolic process
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0019706 F protein-cysteine S-palmitoyltransferase activity
GO:0046872 F metal ion binding
2303 O_BomaMSG12073_complete:A_BomaMSG_c22384_g1_i1
112bp
2304 O_BomaMSG12074_3prime_partial:A_BomaMSG_c22384_g1_i2
249bp
WW_domain_binding_protein_4_isoform_X2_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005886 C plasma membrane
GO:0006397 P mRNA processing
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
GO:0045292 P mRNA cis splicing, via spliceosome
GO:0046872 F metal ion binding
GO:0070064 F proline-rich region binding
2305 O_BomaMSG12075_complete:A_BomaMSG_c22384_g1_i2
112bp
2306 O_BomaMSG12076_internal:A_BomaMSG_c22385_g1_i1
120bp
pre-mRNA-processing_factor_40_homolog_A_isoform_X3_[Bombyx_mori]
GO:0000398 P mRNA splicing, via spliceosome
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005685 C U1 snRNP
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
GO:0071004 C U2-type prespliceosome
2307 O_BomaMSG12077_internal:A_BomaMSG_c22385_g3_i1
233bp
pre-mRNA-processing_factor_40_homolog_A_isoform_X3_[Bombyx_mori]
GO:0000398 P mRNA splicing, via spliceosome
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005685 C U1 snRNP
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
GO:0071004 C U2-type prespliceosome
2308 O_BomaMSG12078_5prime_partial:A_BomaMSG_c22386_g1_i1
360bp
hydroxyacyl-coenzyme_A_dehydrogenase_[Bombyx_mori]
GO:0000062 F fatty-acyl-CoA binding
GO:0003824 F catalytic activity
GO:0003857 F 3-hydroxyacyl-CoA dehydrogenase activity
GO:0003985 F acetyl-CoA C-acetyltransferase activity
GO:0003988 F acetyl-CoA C-acyltransferase activity
GO:0004300 F enoyl-CoA hydratase activity
GO:0005515 F protein binding
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006635 P fatty acid beta-oxidation
GO:0008152 P metabolic process
GO:0016491 F oxidoreductase activity
GO:0016507 C mitochondrial fatty acid beta-oxidation multienzyme complex
GO:0016508 F long-chain-enoyl-CoA hydratase activity
GO:0016509 F long-chain-3-hydroxyacyl-CoA dehydrogenase activity
GO:0016829 F lyase activity
GO:0032403 F protein-containing complex binding
GO:0032868 P response to insulin
GO:0035965 P cardiolipin acyl-chain remodeling
GO:0042493 P response to xenobiotic stimulus
GO:0042645 C mitochondrial nucleoid
GO:0051287 F NAD binding
GO:0055114 P obsolete oxidation-reduction process
2309 O_BomaMSG12079_internal:A_BomaMSG_c22386_g2_i1
439bp
hydroxyacyl-coenzyme_A_dehydrogenase_[Bombyx_mori]
GO:0000062 F fatty-acyl-CoA binding
GO:0003824 F catalytic activity
GO:0003857 F 3-hydroxyacyl-CoA dehydrogenase activity
GO:0003985 F acetyl-CoA C-acetyltransferase activity
GO:0003988 F acetyl-CoA C-acyltransferase activity
GO:0004300 F enoyl-CoA hydratase activity
GO:0005515 F protein binding
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006635 P fatty acid beta-oxidation
GO:0008152 P metabolic process
GO:0016491 F oxidoreductase activity
GO:0016507 C mitochondrial fatty acid beta-oxidation multienzyme complex
GO:0016508 F long-chain-enoyl-CoA hydratase activity
GO:0016509 F long-chain-3-hydroxyacyl-CoA dehydrogenase activity
GO:0016829 F lyase activity
GO:0032403 F protein-containing complex binding
GO:0032868 P response to insulin
GO:0035965 P cardiolipin acyl-chain remodeling
GO:0042493 P response to xenobiotic stimulus
GO:0042645 C mitochondrial nucleoid
GO:0051287 F NAD binding
GO:0055114 P obsolete oxidation-reduction process
2310 O_BomaMSG1207_5prime_partial:A_BomaMSG_c5035_g1_i1
109bp
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