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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
751 A_BomoOtmSK_comp10341_c1_seq1
780bp
FPKM:1.23 TPM:1.32
752 A_BomoOtmSK_comp1034221_c0_seq1
215bp
 PREDICTED:_uncharacterized_protein_LOC106713162_[Papilio_machaon]
FPKM:1.04 TPM:1.12
753 A_BomoOtmSK_comp1034227_c0_seq1
218bp
FPKM:1.96 TPM:2.11
754 A_BomoOtmSK_comp10342_c0_seq1
261bp
FPKM:4.73 TPM:5.10
755 A_BomoOtmSK_comp10342_c1_seq1
902bp
FPKM:2.10 TPM:2.27
756 A_BomoOtmSK_comp1034346_c0_seq1
201bp
 uncharacterized_protein_LOC101742662_[Bombyx_mori]
FPKM:2.79 TPM:3.00
757 A_BomoOtmSK_comp1034349_c0_seq1
361bp
FPKM:0.48 TPM:0.52
758 A_BomoOtmSK_comp1034391_c0_seq1
304bp
FPKM:0.70 TPM:0.76
759 A_BomoOtmSK_comp10343_c0_seq1
2227bp
 protein_PTCD3_homolog,_mitochondrial_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0003723 F RNA binding
GO:0005575 C cellular_component
GO:0005739 C mitochondrion
GO:0006417 P regulation of translation
GO:0008150 P biological_process
GO:0019843 F rRNA binding
GO:0032543 P mitochondrial translation
GO:0043024 F ribosomal small subunit binding
FPKM:11.70 TPM:12.61
760 A_BomoOtmSK_comp103443_c0_seq1
334bp
FPKM:3.39 TPM:3.66
761 A_BomoOtmSK_comp1034461_c0_seq1
267bp
 uncharacterized_protein_LOC110373945_[Helicoverpa_armigera]
FPKM:0.98 TPM:1.06
762 A_BomoOtmSK_comp103447_c0_seq1
603bp
FPKM:4.82 TPM:5.20
763 A_BomoOtmSK_comp1034490_c0_seq1
221bp
 exostosin-2_[Bombyx_mori]
FPKM:1.86 TPM:2.00
764 A_BomoOtmSK_comp10344_c0_seq1
443bp
 craniofacial_development_protein_2-like_[Helicoverpa_armigera]
FPKM:2.48 TPM:2.67
765 A_BomoOtmSK_comp10344_c0_seq2
225bp
FPKM:2.60 TPM:2.80
766 A_BomoOtmSK_comp1034506_c0_seq1
301bp
FPKM:0.36 TPM:0.39
767 A_BomoOtmSK_comp1034538_c0_seq1
208bp
FPKM:0.00 TPM:0.00
768 A_BomoOtmSK_comp1034547_c0_seq1
758bp
 neural-cadherin_isoform_X5_[Bombyx_mori]
GO:0004872 F signaling receptor activity
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0005911 C cell-cell junction
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007411 P axon guidance
GO:0007412 P axon target recognition
GO:0007413 P axonal fasciculation
GO:0008013 F beta-catenin binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016318 P ommatidial rotation
GO:0016339 P calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0019233 P sensory perception of pain
GO:0030424 C axon
GO:0030425 C dendrite
GO:0031290 P retinal ganglion cell axon guidance
GO:0042803 F protein homodimerization activity
GO:0044331 P cell-cell adhesion mediated by cadherin
GO:0045296 F cadherin binding
GO:0045463 P R8 cell development
GO:0045467 P R7 cell development
GO:0046872 F metal ion binding
GO:0048675 P axon extension
GO:0048814 P regulation of dendrite morphogenesis
GO:0048841 P regulation of axon extension involved in axon guidance
GO:0048846 P axon extension involved in axon guidance
GO:0050774 P negative regulation of dendrite morphogenesis
GO:0050839 F cell adhesion molecule binding
FPKM:0.53 TPM:0.57
769 A_BomoOtmSK_comp1034580_c0_seq1
316bp
 hypothetical_protein_RR48_04989_[Papilio_machaon]
FPKM:0.64 TPM:0.69
770 A_BomoOtmSK_comp1034597_c0_seq1
234bp
 uncharacterized_protein_LOC110385712_[Bombyx_mori]
FPKM:1.50 TPM:1.62
771 A_BomoOtmSK_comp1034602_c0_seq1
279bp
FPKM:1.31 TPM:1.41
772 A_BomoOtmSK_comp1034611_c0_seq1
232bp
 Robo1a_[Bombyx_mori]
GO:0001764 P neuron migration
GO:0005515 F protein binding
GO:0005887 C integral component of plasma membrane
GO:0008046 F axon guidance receptor activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0033563 P dorsal/ventral axon guidance
GO:0035385 P Roundabout signaling pathway
FPKM:0.77 TPM:0.83
773 A_BomoOtmSK_comp1034631_c0_seq1
242bp
FPKM:0.67 TPM:0.72
774 A_BomoOtmSK_comp1034685_c0_seq1
244bp
FPKM:0.00 TPM:0.00
775 A_BomoOtmSK_comp10346_c0_seq1
1500bp
 protein_spaetzle_5_[Bombyx_mori]
GO:0000578 P embryonic axis specification
GO:0005121 F Toll binding
GO:0005125 F cytokine activity
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0006952 P defense response
GO:0006955 P immune response
GO:0006965 P positive regulation of biosynthetic process of antibacterial peptides active against Gram-positive bacteria
GO:0006967 P positive regulation of antifungal peptide biosynthetic process
GO:0007275 P multicellular organism development
GO:0007310 P oocyte dorsal/ventral axis specification
GO:0007311 P maternal specification of dorsal/ventral axis, oocyte, germ-line encoded
GO:0008045 P motor neuron axon guidance
GO:0008063 P Toll signaling pathway
GO:0008083 F growth factor activity
GO:0008592 P regulation of Toll signaling pathway
GO:0009620 P response to fungus
GO:0009950 P dorsal/ventral axis specification
GO:0009953 P dorsal/ventral pattern formation
GO:0016015 F morphogen activity
GO:0019732 P antifungal humoral response
GO:0031334 P positive regulation of protein-containing complex assembly
GO:0031640 P killing of cells of another organism
GO:0042803 F protein homodimerization activity
GO:0043234 C protein-containing complex
GO:0045087 P innate immune response
GO:0050830 P defense response to Gram-positive bacterium
GO:0050832 P defense response to fungus
FPKM:2.26 TPM:2.44
776 A_BomoOtmSK_comp1034717_c0_seq1
218bp
 unnamed_protein_product,_partial_[Bombyx_mori]
FPKM:0.00 TPM:0.00
777 A_BomoOtmSK_comp1034738_c0_seq1
231bp
 LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101740701_[Bombyx_mori]
FPKM:0.00 TPM:0.00
778 A_BomoOtmSK_comp1034767_c0_seq1
226bp
FPKM:1.70 TPM:1.84
779 A_BomoOtmSK_comp1034787_c0_seq1
244bp
FPKM:0.65 TPM:0.70
780 A_BomoOtmSK_comp10347_c0_seq1
225bp
FPKM:2.60 TPM:2.80
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