SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search Assembled RNA-Seq

previous next from show/47999
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
721 A_BomoOtmSK_comp10336_c0_seq1
303bp
FPKM:1.06 TPM:1.14
722 A_BomoOtmSK_comp10336_c0_seq2
277bp
 hypothetical_protein_[Acinetobacter_baumannii]
FPKM:0.00 TPM:0.00
723 A_BomoOtmSK_comp1033757_c0_seq1
246bp
 Chitin-binding_protein_[Operophtera_brumata]
FPKM:1.90 TPM:2.05
724 A_BomoOtmSK_comp1033760_c0_seq1
205bp
FPKM:1.27 TPM:1.37
725 A_BomoOtmSK_comp1033764_c0_seq1
227bp
 uncharacterized_protein_LOC101739271_isoform_X1_[Bombyx_mori]
FPKM:0.84 TPM:0.90
726 A_BomoOtmSK_comp103376_c0_seq1
1432bp
 hypothetical_protein_RR48_01229_[Papilio_machaon]
FPKM:3.60 TPM:3.88
727 A_BomoOtmSK_comp1033771_c0_seq1
222bp
FPKM:0.91 TPM:0.98
728 A_BomoOtmSK_comp1033787_c0_seq1
244bp
FPKM:0.65 TPM:0.70
729 A_BomoOtmSK_comp1033793_c0_seq1
295bp
FPKM:0.38 TPM:0.41
730 A_BomoOtmSK_comp10337_c0_seq1
1302bp
 E3_ubiquitin-protein_ligase_UBR4_[Bombyx_mori]
GO:0005516 F calmodulin binding
GO:0007275 P multicellular organism development
GO:0007286 P spermatid development
GO:0007291 P sperm individualization
GO:0007399 P nervous system development
GO:0007601 P visual perception
GO:0008270 F zinc ion binding
GO:0030154 P cell differentiation
GO:0046872 F metal ion binding
GO:0050896 P response to stimulus
FPKM:11.23 TPM:12.11
731 A_BomoOtmSK_comp1033828_c0_seq1
212bp
FPKM:0.00 TPM:0.00
732 A_BomoOtmSK_comp1033893_c0_seq1
332bp
FPKM:0.57 TPM:0.62
733 A_BomoOtmSK_comp1033899_c0_seq1
386bp
FPKM:0.63 TPM:0.68
734 A_BomoOtmSK_comp10338_c0_seq1
403bp
 protein_kish-A_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005794 C Golgi apparatus
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:28.69 TPM:30.93
735 A_BomoOtmSK_comp1033957_c0_seq1
311bp
 PREDICTED:_uncharacterized_protein_LOC105393363_isoform_X1_[Plutella_xylostella]
FPKM:1.00 TPM:1.07
736 A_BomoOtmSK_comp1033967_c0_seq1
232bp
FPKM:1.55 TPM:1.67
737 A_BomoOtmSK_comp1033975_c0_seq1
324bp
FPKM:0.91 TPM:0.98
738 A_BomoOtmSK_comp10339_c0_seq1
713bp
 DDB1-_and_CUL4-associated_factor_5_isoform_X1_[Bombyx_mori]
FPKM:1.55 TPM:1.67
739 A_BomoOtmSK_comp10339_c1_seq1
441bp
 DDB1-_and_CUL4-associated_factor_5_isoform_X1_[Bombyx_mori]
FPKM:4.33 TPM:4.67
740 A_BomoOtmSK_comp10339_c1_seq2
447bp
 DDB1-_and_CUL4-associated_factor_5_isoform_X1_[Bombyx_mori]
FPKM:0.00 TPM:0.00
741 A_BomoOtmSK_comp1034072_c0_seq1
289bp
 Down_syndrome_cell_adhesion_molecule-like_protein_Dscam2_isoform_X49_[Bombyx_mori]
GO:0005887 C integral component of plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0042802 F identical protein binding
GO:0048812 P neuron projection morphogenesis
FPKM:0.79 TPM:0.86
742 A_BomoOtmSK_comp1034096_c0_seq1
298bp
FPKM:0.74 TPM:0.79
743 A_BomoOtmSK_comp10340_c0_seq1
921bp
 mucin-17_isoform_X9_[Bombyx_mori]
FPKM:0.00 TPM:0.00
744 A_BomoOtmSK_comp10340_c0_seq2
944bp
 mucin-17_isoform_X5_[Bombyx_mori]
FPKM:1.19 TPM:1.28
745 A_BomoOtmSK_comp1034128_c0_seq1
211bp
 putative_bel12_ag_transposon_polyprotein_[Operophtera_brumata]
FPKM:1.12 TPM:1.21
746 A_BomoOtmSK_comp1034146_c0_seq1
227bp
FPKM:1.67 TPM:1.81
747 A_BomoOtmSK_comp1034168_c0_seq1
244bp
FPKM:0.65 TPM:0.70
748 A_BomoOtmSK_comp1034176_c0_seq1
422bp
FPKM:0.36 TPM:0.39
749 A_BomoOtmSK_comp1034184_c0_seq1
326bp
FPKM:0.60 TPM:0.64
750 A_BomoOtmSK_comp10341_c0_seq1
247bp
FPKM:1.87 TPM:2.02
previous next from show/47999

- SilkBase 1999-2023 -