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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
661 A_BomoOtmSK_comp1032572_c0_seq1
212bp
 beta-hexosaminidase_subunit_beta_[Bombyx_mori]
FPKM:1.10 TPM:1.19
662 A_BomoOtmSK_comp1032579_c0_seq1
208bp
FPKM:1.19 TPM:1.29
663 A_BomoOtmSK_comp10325_c0_seq1
328bp
FPKM:1.18 TPM:1.27
664 A_BomoOtmSK_comp1032609_c0_seq1
222bp
FPKM:0.00 TPM:0.00
665 A_BomoOtmSK_comp1032620_c0_seq1
229bp
FPKM:1.62 TPM:1.75
666 A_BomoOtmSK_comp103263_c0_seq1
208bp
FPKM:5.97 TPM:6.43
667 A_BomoOtmSK_comp1032678_c0_seq1
244bp
FPKM:1.30 TPM:1.40
668 A_BomoOtmSK_comp103267_c0_seq1
369bp
 nodal_modulator_1_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030246 F carbohydrate binding
GO:0031648 P protein destabilization
FPKM:6.22 TPM:6.71
669 A_BomoOtmSK_comp1032704_c0_seq1
302bp
FPKM:0.36 TPM:0.38
670 A_BomoOtmSK_comp1032711_c0_seq1
216bp
FPKM:1.02 TPM:1.10
671 A_BomoOtmSK_comp1032732_c0_seq1
289bp
FPKM:1.19 TPM:1.28
672 A_BomoOtmSK_comp1032786_c0_seq1
382bp
 uncharacterized_protein_LOC105842664,_partial_[Bombyx_mori]
FPKM:0.86 TPM:0.93
673 A_BomoOtmSK_comp10327_c0_seq1
1354bp
 ischemia/reperfusion_inducible_protein_[Bombyx_mori]
GO:0000049 F tRNA binding
GO:0002949 P tRNA threonylcarbamoyladenosine modification
GO:0003725 F double-stranded RNA binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006450 P regulation of translational fidelity
GO:0016020 C membrane
GO:0016779 F nucleotidyltransferase activity
GO:0051051 P negative regulation of transport
FPKM:3.85 TPM:4.15
674 A_BomoOtmSK_comp10327_c0_seq2
1278bp
 ischemia/reperfusion_inducible_protein_[Bombyx_mori]
GO:0000049 F tRNA binding
GO:0002949 P tRNA threonylcarbamoyladenosine modification
GO:0003725 F double-stranded RNA binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006450 P regulation of translational fidelity
GO:0016020 C membrane
GO:0016779 F nucleotidyltransferase activity
GO:0051051 P negative regulation of transport
FPKM:8.99 TPM:9.69
675 A_BomoOtmSK_comp1032818_c0_seq1
346bp
FPKM:1.05 TPM:1.13
676 A_BomoOtmSK_comp1032831_c0_seq1
265bp
FPKM:1.51 TPM:1.63
677 A_BomoOtmSK_comp1032856_c0_seq1
226bp
 uncharacterized_protein_LOC101741771_[Bombyx_mori]
FPKM:2.55 TPM:2.75
678 A_BomoOtmSK_comp1032860_c0_seq1
271bp
FPKM:0.47 TPM:0.51
679 A_BomoOtmSK_comp1032873_c0_seq1
217bp
 PREDICTED:_uncharacterized_protein_LOC106709215_isoform_X2_[Papilio_machaon]
FPKM:1.00 TPM:1.08
680 A_BomoOtmSK_comp10328_c0_seq1
3392bp
 bifunctional_heparan_sulfate_N-deacetylase/N-sulfotransferase_[Bombyx_mori]
GO:0000137 C Golgi cis cisterna
GO:0000139 C Golgi membrane
GO:0003824 F catalytic activity
GO:0005622 C intracellular anatomical structure
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0006024 P glycosaminoglycan biosynthetic process
GO:0006790 P sulfur compound metabolic process
GO:0007166 P cell surface receptor signaling pathway
GO:0007283 P spermatogenesis
GO:0007367 P segment polarity determination
GO:0007427 P epithelial cell migration, open tracheal system
GO:0007428 P primary branching, open tracheal system
GO:0007474 P imaginal disc-derived wing vein specification
GO:0007507 P heart development
GO:0007509 P mesoderm migration involved in gastrulation
GO:0008146 F sulfotransferase activity
GO:0008152 P metabolic process
GO:0008543 P fibroblast growth factor receptor signaling pathway
GO:0008587 P imaginal disc-derived wing margin morphogenesis
GO:0015012 P heparan sulfate proteoglycan biosynthetic process
GO:0015014 P heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process
GO:0015016 F [heparan sulfate]-glucosamine N-sulfotransferase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016055 P Wnt signaling pathway
GO:0016740 F transferase activity
GO:0016787 F hydrolase activity
GO:0030210 P heparin biosynthetic process
GO:0045570 P regulation of imaginal disc growth
GO:0048312 P intracellular distribution of mitochondria
GO:0048488 P synaptic vesicle endocytosis
GO:0060828 P regulation of canonical Wnt signaling pathway
GO:0090097 P regulation of BMP signaling pathway
FPKM:3.31 TPM:3.57
681 A_BomoOtmSK_comp1032907_c0_seq1
280bp
FPKM:0.86 TPM:0.93
682 A_BomoOtmSK_comp1032934_c0_seq1
202bp
FPKM:0.00 TPM:0.00
683 A_BomoOtmSK_comp1032941_c0_seq1
203bp
FPKM:1.33 TPM:1.43
684 A_BomoOtmSK_comp1032984_c0_seq1
207bp
FPKM:1.22 TPM:1.31
685 A_BomoOtmSK_comp1032991_c0_seq1
283bp
FPKM:0.84 TPM:0.90
686 A_BomoOtmSK_comp10329_c0_seq1
1342bp
 putative_epidermal_cell_surface_receptor_[Bombyx_mori]
GO:0002168 P instar larval development
GO:0004872 F signaling receptor activity
GO:0005887 C integral component of plasma membrane
GO:0007275 P multicellular organism development
GO:0007411 P axon guidance
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016324 C apical plasma membrane
FPKM:26.15 TPM:28.19
687 A_BomoOtmSK_comp1033035_c0_seq1
258bp
FPKM:0.54 TPM:0.59
688 A_BomoOtmSK_comp1033041_c0_seq1
235bp
FPKM:1.48 TPM:1.59
689 A_BomoOtmSK_comp10330_c0_seq1
353bp
FPKM:1.01 TPM:1.09
690 A_BomoOtmSK_comp103311_c0_seq1
371bp
 F-actin-uncapping_protein_LRRC16A_[Bombyx_mori]
FPKM:5.01 TPM:5.41
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