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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
631 A_BomoOtmSK_comp1032121_c0_seq1
245bp
FPKM:0.64 TPM:0.69
632 A_BomoOtmSK_comp1032137_c0_seq1
421bp
 uncharacterized_protein_LOC110385202_[Bombyx_mori]
FPKM:0.72 TPM:0.78
633 A_BomoOtmSK_comp1032175_c0_seq1
240bp
FPKM:0.69 TPM:0.74
634 A_BomoOtmSK_comp1032190_c0_seq1
244bp
FPKM:1.95 TPM:2.10
635 A_BomoOtmSK_comp10321_c0_seq1
934bp
FPKM:6.25 TPM:6.74
636 A_BomoOtmSK_comp10321_c0_seq2
2042bp
FPKM:2.21 TPM:2.39
637 A_BomoOtmSK_comp1032241_c0_seq1
234bp
 zinc_finger_protein_484_[Bombyx_mori]
FPKM:1.50 TPM:1.62
638 A_BomoOtmSK_comp1032258_c0_seq1
250bp
FPKM:0.00 TPM:0.00
639 A_BomoOtmSK_comp1032259_c0_seq1
263bp
FPKM:1.03 TPM:1.11
640 A_BomoOtmSK_comp1032261_c0_seq1
262bp
FPKM:0.52 TPM:0.56
641 A_BomoOtmSK_comp1032279_c0_seq1
290bp
FPKM:1.18 TPM:1.27
642 A_BomoOtmSK_comp10322_c0_seq1
1776bp
FPKM:1.38 TPM:1.49
643 A_BomoOtmSK_comp1032329_c0_seq1
403bp
 protein_phosphatase_PHLPP-like_protein_isoform_X1_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004721 F phosphoprotein phosphatase activity
GO:0004722 F protein serine/threonine phosphatase activity
GO:0005515 F protein binding
GO:0005575 C cellular_component
GO:0006470 P protein dephosphorylation
GO:0006915 P apoptotic process
GO:0016787 F hydrolase activity
GO:0042981 P regulation of apoptotic process
GO:0046872 F metal ion binding
FPKM:0.78 TPM:0.84
644 A_BomoOtmSK_comp1032337_c0_seq1
285bp
 zinc_finger_protein_208-like_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000976 F transcription cis-regulatory region binding
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001078 F DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003690 F double-stranded DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005794 C Golgi apparatus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006461 P protein-containing complex assembly
GO:0007276 P gamete generation
GO:0010629 P negative regulation of gene expression
GO:0021762 P substantia nigra development
GO:0043565 F sequence-specific DNA binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
FPKM:1.24 TPM:1.33
645 A_BomoOtmSK_comp103235_c0_seq1
848bp
 elongation_of_very_long_chain_fatty_acids_protein_AAEL008004-like_[Bombyx_mori]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006633 P fatty acid biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0019367 P fatty acid elongation, saturated fatty acid
GO:0034626 P fatty acid elongation, polyunsaturated fatty acid
GO:0042761 P very long-chain fatty acid biosynthetic process
FPKM:5.26 TPM:5.67
646 A_BomoOtmSK_comp1032389_c0_seq1
436bp
FPKM:0.34 TPM:0.37
647 A_BomoOtmSK_comp10323_c0_seq1
551bp
 LOW_QUALITY_PROTEIN:_low-density_lipoprotein_receptor-related_protein_2_[Bombyx_mori]
FPKM:2.13 TPM:2.30
648 A_BomoOtmSK_comp10323_c0_seq2
1900bp
 PREDICTED:_low-density_lipoprotein_receptor-related_protein_2_[Amyelois_transitella]
FPKM:18.92 TPM:20.40
649 A_BomoOtmSK_comp1032432_c0_seq1
225bp
FPKM:0.87 TPM:0.93
650 A_BomoOtmSK_comp103244_c0_seq1
313bp
FPKM:2.62 TPM:2.83
651 A_BomoOtmSK_comp1032469_c0_seq1
293bp
 beta-fructofuranosidase_precursor_[Bombyx_mori]
GO:0004553 F hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004564 F beta-fructofuranosidase activity
GO:0004575 F sucrose alpha-glucosidase activity
GO:0005737 C cytoplasm
GO:0005975 P carbohydrate metabolic process
GO:0005985 P sucrose metabolic process
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
FPKM:1.15 TPM:1.24
652 A_BomoOtmSK_comp10324_c0_seq1
677bp
 PREDICTED:_KRAB-A_domain-containing_protein_2-like_isoform_X2_[Acyrthosiphon_pisum]
GO:0000981 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0015074 P DNA integration
FPKM:1.83 TPM:1.98
653 A_BomoOtmSK_comp10324_c1_seq1
266bp
FPKM:1.00 TPM:1.07
654 A_BomoOtmSK_comp10324_c2_seq1
268bp
FPKM:1.46 TPM:1.58
655 A_BomoOtmSK_comp1032511_c0_seq1
246bp
 piggyBac_transposable_element-derived_protein_4-like_isoform_X2_[Helicoverpa_armigera]
FPKM:0.63 TPM:0.68
656 A_BomoOtmSK_comp1032525_c0_seq1
399bp
 delta-like_protein_1_[Bombyx_mori]
GO:0005509 F calcium ion binding
GO:0007154 P cell communication
GO:0007219 P Notch signaling pathway
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0021536 P diencephalon development
GO:0030154 P cell differentiation
GO:0030901 P midbrain development
FPKM:0.79 TPM:0.86
657 A_BomoOtmSK_comp1032539_c0_seq1
257bp
 uncharacterized_protein_LOC110384704_[Bombyx_mori]
FPKM:1.10 TPM:1.19
658 A_BomoOtmSK_comp1032543_c0_seq1
248bp
 feline_leukemia_virus_subgroup_C_receptor-related_protein_2_[Bombyx_mori]
FPKM:1.23 TPM:1.33
659 A_BomoOtmSK_comp1032545_c0_seq1
385bp
FPKM:0.85 TPM:0.92
660 A_BomoOtmSK_comp1032559_c0_seq1
379bp
 myosin-IIIb-like_isoform_X2_[Bombyx_mori]
GO:0000146 F microfilament motor activity
GO:0000166 F nucleotide binding
GO:0001750 C photoreceptor outer segment
GO:0001917 C photoreceptor inner segment
GO:0003774 F cytoskeletal motor activity
GO:0003779 F actin binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0006468 P protein phosphorylation
GO:0007601 P visual perception
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016459 C myosin complex
GO:0016740 F transferase activity
GO:0018105 P peptidyl-serine phosphorylation
GO:0018107 P peptidyl-threonine phosphorylation
GO:0032426 C stereocilium tip
GO:0032433 C filopodium tip
GO:0046777 P protein autophosphorylation
GO:0050896 P response to stimulus
GO:0051491 P positive regulation of filopodium assembly
FPKM:0.66 TPM:0.71
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