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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp10328_c0_seq1
Scaffold_idBomo_Chr22
NCBI non-redundant
(nr)		bifunctional_heparan_sulfate_N-deacetylase/N-sulfotransferase_[Bombyx_mori]
Ontology
GO:0000137 C Golgi cis cisterna
GO:0000139 C Golgi membrane
GO:0003824 F catalytic activity
GO:0005622 C intracellular anatomical structure
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0006024 P glycosaminoglycan biosynthetic process
GO:0006790 P sulfur compound metabolic process
GO:0007166 P cell surface receptor signaling pathway
GO:0007283 P spermatogenesis
GO:0007367 P segment polarity determination
GO:0007427 P epithelial cell migration, open tracheal system
GO:0007428 P primary branching, open tracheal system
GO:0007474 P imaginal disc-derived wing vein specification
GO:0007507 P heart development
GO:0007509 P mesoderm migration involved in gastrulation
GO:0008146 F sulfotransferase activity
GO:0008152 P metabolic process
GO:0008543 P fibroblast growth factor receptor signaling pathway
GO:0008587 P imaginal disc-derived wing margin morphogenesis
GO:0015012 P heparan sulfate proteoglycan biosynthetic process
GO:0015014 P heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process
GO:0015016 F [heparan sulfate]-glucosamine N-sulfotransferase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016055 P Wnt signaling pathway
GO:0016740 F transferase activity
GO:0016787 F hydrolase activity
GO:0030210 P heparin biosynthetic process
GO:0045570 P regulation of imaginal disc growth
GO:0048312 P intracellular distribution of mitochondria
GO:0048488 P synaptic vesicle endocytosis
GO:0060828 P regulation of canonical Wnt signaling pathway
GO:0090097 P regulation of BMP signaling pathway
Transcript
Level		FPKM:3.31 TPM:3.57
ORF EntryO_BomoOtmSK5394_complete:A_BomoOtmSK_comp10328_c0_seq1
Sequence
(Nucleotide)
AGTGATTGTTAGTGTTTGGGTGTATTTTTTCTTTAAAAAATCCTGTAAAGTTGACGTAAT
TGTGACTGAGTTTACCATATAATGAATTAGTGTGTTTAAACGACATTAAGTGTTTAGAAC
AATGAATATGGTGTTACATTGTTAGAAGAAAATGTTTTCAAGATCTGTCATTGTTGATGA
TGAGGCTCATTGAAGAATCGTATCGATGACCGACGGGCCTGCTGAGTGTGGATGGCGTCA
GACACGGATGCCATAGGCTCTATCAGCAACAGCGAACGACATCGCCGTGATGAGCACAAC
CCGCCAAAATGCGTCAGCGGCCTTTTTAAACCGGGAACTGACGCGTTGGTCGGCTCGAGA
TGGCCATAAACTGTGGAGCGCGCGCATACTGCCACCCCGCGTACGCGCACTCTCATGCCC
TACCGCGGCGCTATGAAATGTGGAAACACTGCAGGTGGCGACAGAAAACGTCACCACCAA
GGACAAACGCAGCTGTTAGGGTGCCCAGATAGAGACGTTTAGAAGTGTTTTCCTTAGAGG
CCTAAGTGTTACTGTTCAGTGTAAATATAGTGGTGTGTGTAAATGTTAAGAATGACGGGC
GAAAACCGGGGCGCTCGCGCTCCATTACTTGAGTGCGGGAGTGGCGAATACTCGCATAAC
CATAAGACGTTAGCGCCGCGGTGTTGCTTCTGGTTGGCCAGCCACGTCAACGTCAGAAAA
TGCGTCGCTGGCGTCATGCTGCTATCCGTCCTCACCATATTGTTTTACTCCTATTATGTC
ACAATACCTCTGACCAGCTTAGTGTGGCGAGATCGAATCCCGCGTCCACTCACCCAGTGT
TCATTGCTCGCTTCGCAACAGCAAGCTGCGCGCGATCATCGTTCGGACGCCCGACTTCGT
ATCGACGCTAAAGTACTTGTTATAGTAGAATCGGCCTACTCACGACTTGGTCGCGACATC
GCCGAGCTCCTTGTCGCCAACCGTATAAGGTACAAAATTGAAGTAGCAGGCAAGAGTCTG
CCTGTACTCACCACTTTGGACAAGGGGCGTTACGGCGTGATCGTGTTCGAATCTCTGTCG
AAATATGCCAATATGGATAAATGGAATCGAGAGCTACTCGACAAATACTGTCGGGAGTAT
TCCGTTGGAGTAGTCGGCTTCGCGACGCCTAGCGAAGAGACCTTGGTCGGCGCACAGCTA
AAAGGATTTCCACTATTCATGCATACTAATTTGAGGTTGAAGGATGCAACGTTGAACGCT
GCTTCACCCGTATTGCGATTGGCTCGTGCTGGAGAAACTGCCTGGGGCGCGCTTCCTGGT
GACCACTGGTCGGTGTTCCGAGCCAACAGCTCTACCTACGAACCTATCGCGTGGGCGCTT
AGAGAACACGATTATGAAACTGATGGAGAGCGGATGCCGCTGGCAACTGTGATACAAGAC
CACGGCCGTTTGGACGGCGTCCAACGCGTTCTGTTCGGTAGTGGTCTACAGTTCTGGTTG
CATCGACTGCTTTTTCTGGACGCATTAAGCTACCTCAGTCACGGGCAGCTCAGCTTGAGT
CTGGATCGATGGATATTGGTTGATATCGATGACATCTTTGTCGGTGAGAAAGGTACCCGT
CTTCACGAAGAAGACGTGGCGGCACTATTGACGTCTCAGGCAGCACTGCAGCGTTTAGTT
CCGGGATTCAGGTTCAACCTCGGCTACAGTGCGAAGTACTACCACCACGGAACGCCAACG
GAAAACCTCGGCGATGACGCTCTGTTAAAGCATAGGGAATATTTTAATTGGTTTTGCCAC
ATGTGGAACCATCAACAGCCTCACCTGTACAACAACGTGTCTCAGCTCGAAGCGGAAATG
ATGCTGAACAAACAGTTCGCTCTAGAGCACGGGATCCCGACGAACTCTTGTTACTCCGTG
TCCCCGCACCACTCCGGAGTCTATCCCGTACACGAACCTCTCTACGAAGCCTGGAGGAAA
GTCTGGGACGTTAAAGTTACTAGCACGGAGGAGTATCCTCACTTAAGACCAGCTAGATTA
CGTCGCGGTTTCCGGCACCGGGGCGTGATGGTGTTGCCGCGTCAAACGTGCGGTCTGTTC
ACGCACACGTTACTGTTGGAGCGCTATCCGGGCGGGAGGCATCGACTAGACCGCTCCATA
CAGGGAGGCGAGCTCTTCCAGACTGTTATCAACAATCCGATCAACGTGTTCATGACCCAC
ATGTCGAATTATGGCAACGATCGACTCGCATTATACACTTTCGAGTCGGTCGTCAAGTTC
CTGAGGTGCTGGACCAATGTGCGTCTTGCATCAGCACCACCTTTGGCCCTGGCGGAGAAG
TATTTCCAACTGAGACCCGACGAACTGAACCCGTTGTGGGGGAATCCGTGCGATGACATC
CGACACCGCCGTATATGGTCCAAGAGTAAATGGTGCGGCACACTGCCCAGACTCCTAGTG
ATCGGTCCCCAAAAGACCGGCAGCACAGCCCTATACACGTTCCTAGCGATGCACCCAACA
TTAAAGCCGAACTTGCCCAGCCCGAGCACATACGAAGAGCTACAATTCTTCAATAACAAC
AACTACCTGAAAGGACTGGATTGGTACCTGAATTTTTTCCCGCCAAGTCTAACTAACAAC
TCACAAATAACATTCGAGAAGTCGGCGACGTACTTCGACGGCGACCTGGTGCCGAGGAGA
GCGCACGCATTACTGCCCAACGCCAAGATCATTGCCATACTGATATCACCATCGAAACGT
GCGTACTCCTGGTATCAGCACATACGCTCTCACGGCGACCCGATCGCGAATAATTACACA
TTCCACACAATCATCACGGCGAATGACTCCGCACCGAAACAACTCAGGGATTTGAGGAAT
CGTTGCTTGAATCCTGGGAAATACAGTCATTATTTAGAACGTTGGTTGTCGGAGTACAGC
GTGCACCAGTTGCACGTCATCGACGGGTCGATGCTGCGCTCTGAGCCGGCGGTCGTGATG
AACACGCTCCAGAAGTTCCTCAAGATATCGCCGCATATCGACTACAATAAACTGCTCAAA
TACGATCCGAAAAAAGGATTCTTCTGTCAAGTGGTCGGGGGCGAGAAAACGAAATGCCTT
GGGAAGTCGAAGGGTCGCGTGTACCCGCCGATGGAGGAGCGCTCGGCCAAGTTCCTCAGG
CGTTACTACACGCCGCATAACACTGCACTGTCCAAGCTGCTGGTCAGGGTCGGCCGCCCC
GTGCCGCACTGGCTCAAGGACGAGCTCTCGGCCAACGGATGACCTCACACCGACTGCAAC
CTCCTGTTCTATAAATAAGGCGTAATTTAATATACACTAAACCTGAAAAAAAGTTACTTA
AATATGAAAATCTATATATATATAAATGAATT
(3392 bp)

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