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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
331 A_BomoOtmSK_comp1018146_c0_seq1
224bp
FPKM:1.76 TPM:1.90
332 A_BomoOtmSK_comp10181_c0_seq1
393bp
FPKM:1.84 TPM:1.98
333 A_BomoOtmSK_comp1018270_c0_seq1
221bp
FPKM:1.86 TPM:2.00
334 A_BomoOtmSK_comp10183_c0_seq1
242bp
FPKM:3.34 TPM:3.60
335 A_BomoOtmSK_comp10184_c0_seq1
290bp
FPKM:1.97 TPM:2.12
336 A_BomoOtmSK_comp101857_c0_seq1
406bp
FPKM:5.97 TPM:6.44
337 A_BomoOtmSK_comp10186_c0_seq1
790bp
 PREDICTED:_CLIP-associating_protein_[Papilio_xuthus]
GO:0000022 P mitotic spindle elongation
GO:0000070 P mitotic sister chromatid segregation
GO:0000775 C chromosome, centromeric region
GO:0000776 C kinetochore
GO:0000922 C spindle pole
GO:0005525 F GTP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005819 C spindle
GO:0005827 C polar microtubule
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0005876 C spindle microtubule
GO:0007049 P cell cycle
GO:0007051 P spindle organization
GO:0007052 P mitotic spindle organization
GO:0007067 P mitotic cell cycle
GO:0007275 P multicellular organism development
GO:0007282 P cystoblast division
GO:0007411 P axon guidance
GO:0008017 F microtubule binding
GO:0016325 P oocyte microtubule cytoskeleton organization
GO:0019827 P stem cell population maintenance
GO:0030154 P cell differentiation
GO:0030426 C growth cone
GO:0030723 P ovarian fusome organization
GO:0031116 P positive regulation of microtubule polymerization
GO:0032154 C cleavage furrow
GO:0035099 P hemocyte migration
GO:0035371 C microtubule plus-end
GO:0040001 P establishment of mitotic spindle localization
GO:0042995 C cell projection
GO:0045169 C fusome
GO:0045172 C germline ring canal
GO:0046580 P negative regulation of Ras protein signal transduction
GO:0046602 P regulation of mitotic centrosome separation
GO:0048477 P oogenesis
GO:0051225 P spindle assembly
GO:0051301 P cell division
GO:0051315 P attachment of mitotic spindle microtubules to kinetochore
GO:0090307 P mitotic spindle assembly
FPKM:2.89 TPM:3.11
338 A_BomoOtmSK_comp10186_c0_seq2
772bp
 PREDICTED:_CLIP-associating_protein_[Papilio_xuthus]
GO:0000022 P mitotic spindle elongation
GO:0000070 P mitotic sister chromatid segregation
GO:0000775 C chromosome, centromeric region
GO:0000776 C kinetochore
GO:0000922 C spindle pole
GO:0005525 F GTP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005819 C spindle
GO:0005827 C polar microtubule
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0005876 C spindle microtubule
GO:0007049 P cell cycle
GO:0007051 P spindle organization
GO:0007052 P mitotic spindle organization
GO:0007067 P mitotic cell cycle
GO:0007275 P multicellular organism development
GO:0007282 P cystoblast division
GO:0007411 P axon guidance
GO:0008017 F microtubule binding
GO:0016325 P oocyte microtubule cytoskeleton organization
GO:0019827 P stem cell population maintenance
GO:0030154 P cell differentiation
GO:0030426 C growth cone
GO:0030723 P ovarian fusome organization
GO:0031116 P positive regulation of microtubule polymerization
GO:0032154 C cleavage furrow
GO:0035099 P hemocyte migration
GO:0035371 C microtubule plus-end
GO:0040001 P establishment of mitotic spindle localization
GO:0042995 C cell projection
GO:0045169 C fusome
GO:0045172 C germline ring canal
GO:0046580 P negative regulation of Ras protein signal transduction
GO:0046602 P regulation of mitotic centrosome separation
GO:0048477 P oogenesis
GO:0051225 P spindle assembly
GO:0051301 P cell division
GO:0051315 P attachment of mitotic spindle microtubules to kinetochore
GO:0090307 P mitotic spindle assembly
FPKM:6.42 TPM:6.93
339 A_BomoOtmSK_comp10186_c0_seq3
614bp
 PREDICTED:_CLIP-associating_protein_[Papilio_xuthus]
GO:0000022 P mitotic spindle elongation
GO:0000070 P mitotic sister chromatid segregation
GO:0000775 C chromosome, centromeric region
GO:0000776 C kinetochore
GO:0000922 C spindle pole
GO:0005525 F GTP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005819 C spindle
GO:0005827 C polar microtubule
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0005876 C spindle microtubule
GO:0007049 P cell cycle
GO:0007051 P spindle organization
GO:0007052 P mitotic spindle organization
GO:0007067 P mitotic cell cycle
GO:0007275 P multicellular organism development
GO:0007282 P cystoblast division
GO:0007411 P axon guidance
GO:0008017 F microtubule binding
GO:0016325 P oocyte microtubule cytoskeleton organization
GO:0019827 P stem cell population maintenance
GO:0030154 P cell differentiation
GO:0030426 C growth cone
GO:0030723 P ovarian fusome organization
GO:0031116 P positive regulation of microtubule polymerization
GO:0032154 C cleavage furrow
GO:0035099 P hemocyte migration
GO:0035371 C microtubule plus-end
GO:0040001 P establishment of mitotic spindle localization
GO:0042995 C cell projection
GO:0045169 C fusome
GO:0045172 C germline ring canal
GO:0046580 P negative regulation of Ras protein signal transduction
GO:0046602 P regulation of mitotic centrosome separation
GO:0048477 P oogenesis
GO:0051225 P spindle assembly
GO:0051301 P cell division
GO:0051315 P attachment of mitotic spindle microtubules to kinetochore
GO:0090307 P mitotic spindle assembly
FPKM:3.39 TPM:3.65
340 A_BomoOtmSK_comp10187_c0_seq1
1193bp
 delta_precursor_[Bombyx_mori]
FPKM:1.58 TPM:1.71
341 A_BomoOtmSK_comp10187_c1_seq1
643bp
FPKM:1.50 TPM:1.62
342 A_BomoOtmSK_comp10188_c0_seq1
1075bp
 BTB/POZ_domain-containing_protein_KCTD5_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0008150 P biological_process
GO:0032403 F protein-containing complex binding
GO:0051260 P protein homooligomerization
FPKM:11.67 TPM:12.58
343 A_BomoOtmSK_comp10190_c0_seq1
3788bp
 Protein_kinase_C-like_3_[Papilio_xuthus]
GO:0000132 P establishment of mitotic spindle orientation
GO:0000166 F nucleotide binding
GO:0001738 P morphogenesis of a polarized epithelium
GO:0002052 P positive regulation of neuroblast proliferation
GO:0003382 P epithelial cell morphogenesis
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004697 F protein kinase C activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005938 C cell cortex
GO:0006468 P protein phosphorylation
GO:0007043 P cell-cell junction assembly
GO:0007163 P establishment or maintenance of cell polarity
GO:0007283 P spermatogenesis
GO:0007294 P germarium-derived oocyte fate determination
GO:0007309 P oocyte axis specification
GO:0007314 P oocyte anterior/posterior axis specification
GO:0007416 P synapse assembly
GO:0007423 P sensory organ development
GO:0007430 P terminal branching, open tracheal system
GO:0007613 P memory
GO:0010592 P positive regulation of lamellipodium assembly
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016324 C apical plasma membrane
GO:0016327 C apicolateral plasma membrane
GO:0016332 P establishment or maintenance of polarity of embryonic epithelium
GO:0016334 P establishment or maintenance of polarity of follicular epithelium
GO:0016740 F transferase activity
GO:0017022 F myosin binding
GO:0018105 P peptidyl-serine phosphorylation
GO:0030011 P maintenance of cell polarity
GO:0034332 P adherens junction organization
GO:0035003 C subapical complex
GO:0035011 P melanotic encapsulation of foreign target
GO:0035556 P intracellular signal transduction
GO:0045167 P asymmetric protein localization involved in cell fate determination
GO:0045176 P apical protein localization
GO:0045179 C apical cortex
GO:0045186 P zonula adherens assembly
GO:0045196 P establishment or maintenance of neuroblast polarity
GO:0045197 P establishment or maintenance of epithelial cell apical/basal polarity
GO:0045198 P establishment of epithelial cell apical/basal polarity
GO:0046667 P compound eye retinal cell programmed cell death
GO:0046872 F metal ion binding
GO:0051491 P positive regulation of filopodium assembly
GO:0051601 P exocyst localization
GO:0055059 P asymmetric neuroblast division
GO:0060446 P branching involved in open tracheal system development
GO:0072659 P protein localization to plasma membrane
GO:0090163 P establishment of epithelial cell planar polarity
FPKM:2.15 TPM:2.32
344 A_BomoOtmSK_comp10190_c1_seq1
1301bp
 atypical_protein_kinase_C_[Bombyx_mori]
GO:0000132 P establishment of mitotic spindle orientation
GO:0000166 F nucleotide binding
GO:0001738 P morphogenesis of a polarized epithelium
GO:0002052 P positive regulation of neuroblast proliferation
GO:0003382 P epithelial cell morphogenesis
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004697 F protein kinase C activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005938 C cell cortex
GO:0006468 P protein phosphorylation
GO:0007043 P cell-cell junction assembly
GO:0007163 P establishment or maintenance of cell polarity
GO:0007283 P spermatogenesis
GO:0007294 P germarium-derived oocyte fate determination
GO:0007309 P oocyte axis specification
GO:0007314 P oocyte anterior/posterior axis specification
GO:0007416 P synapse assembly
GO:0007423 P sensory organ development
GO:0007430 P terminal branching, open tracheal system
GO:0007613 P memory
GO:0010592 P positive regulation of lamellipodium assembly
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016324 C apical plasma membrane
GO:0016327 C apicolateral plasma membrane
GO:0016332 P establishment or maintenance of polarity of embryonic epithelium
GO:0016334 P establishment or maintenance of polarity of follicular epithelium
GO:0016740 F transferase activity
GO:0017022 F myosin binding
GO:0018105 P peptidyl-serine phosphorylation
GO:0030011 P maintenance of cell polarity
GO:0034332 P adherens junction organization
GO:0035003 C subapical complex
GO:0035011 P melanotic encapsulation of foreign target
GO:0035556 P intracellular signal transduction
GO:0045167 P asymmetric protein localization involved in cell fate determination
GO:0045176 P apical protein localization
GO:0045179 C apical cortex
GO:0045186 P zonula adherens assembly
GO:0045196 P establishment or maintenance of neuroblast polarity
GO:0045197 P establishment or maintenance of epithelial cell apical/basal polarity
GO:0045198 P establishment of epithelial cell apical/basal polarity
GO:0046667 P compound eye retinal cell programmed cell death
GO:0046872 F metal ion binding
GO:0051491 P positive regulation of filopodium assembly
GO:0051601 P exocyst localization
GO:0055059 P asymmetric neuroblast division
GO:0060446 P branching involved in open tracheal system development
GO:0072659 P protein localization to plasma membrane
GO:0090163 P establishment of epithelial cell planar polarity
FPKM:3.21 TPM:3.46
345 A_BomoOtmSK_comp10191_c0_seq1
227bp
FPKM:5.02 TPM:5.42
346 A_BomoOtmSK_comp10191_c1_seq1
1118bp
 PREDICTED:_probable_O-acetyltransferase_CAS1_[Papilio_polytes]
FPKM:2.11 TPM:2.28
347 A_BomoOtmSK_comp10191_c1_seq2
1117bp
FPKM:0.00 TPM:0.00
348 A_BomoOtmSK_comp10192_c0_seq1
2245bp
 uncharacterized_protein_LOC100286771_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0006260 P DNA replication
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0008150 P biological_process
GO:0042555 C MCM complex
GO:0051301 P cell division
FPKM:4.41 TPM:4.76
349 A_BomoOtmSK_comp10192_c0_seq2
2060bp
 uncharacterized_protein_LOC100286771_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0006260 P DNA replication
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0008150 P biological_process
GO:0042555 C MCM complex
GO:0051301 P cell division
FPKM:5.59 TPM:6.02
350 A_BomoOtmSK_comp10193_c0_seq1
229bp
 uncharacterized_protein_LOC110384942_[Bombyx_mori]
FPKM:0.81 TPM:0.87
351 A_BomoOtmSK_comp10193_c1_seq1
268bp
 uncharacterized_protein_LOC110384942_[Bombyx_mori]
FPKM:0.97 TPM:1.05
352 A_BomoOtmSK_comp101946_c0_seq1
562bp
FPKM:5.23 TPM:5.64
353 A_BomoOtmSK_comp101947_c0_seq1
523bp
FPKM:3.29 TPM:3.55
354 A_BomoOtmSK_comp10195_c0_seq1
545bp
 uncharacterized_protein_LOC101743330_[Bombyx_mori]
FPKM:4.08 TPM:4.40
355 A_BomoOtmSK_comp10195_c0_seq2
916bp
 uncharacterized_protein_LOC101743330_[Bombyx_mori]
FPKM:8.99 TPM:9.70
356 A_BomoOtmSK_comp10196_c0_seq1
830bp
 follistatin-A_[Bombyx_mori]
GO:0005576 C extracellular region
FPKM:13.07 TPM:14.10
357 A_BomoOtmSK_comp1019736_c0_seq1
222bp
 G-protein_coupled_receptor_Mth_isoform_X2_[Bombyx_mori]
FPKM:0.91 TPM:0.98
358 A_BomoOtmSK_comp10197_c0_seq1
1935bp
 Retrovirus-related_Pol_polyprotein_from_transposon_TNT_1-94_[Papilio_machaon]
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:1.48 TPM:1.60
359 A_BomoOtmSK_comp10198_c0_seq1
1633bp
 probable_methyltransferase-like_protein_15_homolog_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0008168 F methyltransferase activity
GO:0016740 F transferase activity
GO:0032259 P methylation
GO:0070475 P rRNA base methylation
GO:0071424 F rRNA (cytosine-N4-)-methyltransferase activity
FPKM:9.83 TPM:10.60
360 A_BomoOtmSK_comp1019924_c0_seq1
224bp
FPKM:0.88 TPM:0.95
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