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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1141 A_BomoOtmSK_comp10425_c0_seq2
1430bp
 TBC1_domain_family_member_9_isoform_X1_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0006886 P intracellular protein transport
GO:0012505 C endomembrane system
GO:0017137 F small GTPase binding
GO:0031338 P regulation of vesicle fusion
GO:0090630 P activation of GTPase activity
FPKM:0.46 TPM:0.49
1142 A_BomoOtmSK_comp1042610_c0_seq1
391bp
 PREDICTED:_uncharacterized_protein_LOC106141368_[Amyelois_transitella]
FPKM:0.62 TPM:0.67
1143 A_BomoOtmSK_comp1042617_c0_seq1
350bp
FPKM:0.77 TPM:0.83
1144 A_BomoOtmSK_comp1042667_c0_seq1
235bp
FPKM:0.00 TPM:0.00
1145 A_BomoOtmSK_comp10426_c0_seq1
4045bp
FPKM:16.42 TPM:17.71
1146 A_BomoOtmSK_comp1042707_c0_seq1
271bp
FPKM:1.42 TPM:1.53
1147 A_BomoOtmSK_comp10427_c0_seq1
1309bp
 mitochondrial_import_receptor_subunit_TOM22_homolog_isoform_X1_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:20.18 TPM:21.76
1148 A_BomoOtmSK_comp1042857_c0_seq1
306bp
 Voltage-dependent_calcium_channel_type_D_subunit_alpha-1_[Papilio_machaon]
GO:0005216 F ion channel activity
GO:0005244 F voltage-gated ion channel activity
GO:0005245 F voltage-gated calcium channel activity
GO:0005262 F calcium channel activity
GO:0005891 C voltage-gated calcium channel complex
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006816 P calcium ion transport
GO:0006936 P muscle contraction
GO:0008331 F high voltage-gated calcium channel activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016323 C basolateral plasma membrane
GO:0016324 C apical plasma membrane
GO:0034765 P regulation of ion transmembrane transport
GO:0042045 P epithelial fluid transport
GO:0046872 F metal ion binding
GO:0055085 P transmembrane transport
GO:0070588 P calcium ion transmembrane transport
GO:0086010 P membrane depolarization during action potential
FPKM:0.34 TPM:0.37
1149 A_BomoOtmSK_comp1042896_c0_seq1
367bp
FPKM:0.93 TPM:1.00
1150 A_BomoOtmSK_comp104289_c0_seq1
1050bp
 uncharacterized_protein_LOC101738540_[Bombyx_mori]
FPKM:2.34 TPM:2.52
1151 A_BomoOtmSK_comp10428_c0_seq1
919bp
 ankyrin_repeat,_SAM_and_basic_leucine_zipper_domain-containing_protein_1_[Bombyx_mori]
FPKM:3.40 TPM:3.67
1152 A_BomoOtmSK_comp10428_c0_seq2
530bp
 ankyrin_repeat,_SAM_and_basic_leucine_zipper_domain-containing_protein_1_[Bombyx_mori]
GO:0000724 P double-strand break repair via homologous recombination
GO:0005634 C nucleus
GO:0005662 C DNA replication factor A complex
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0031297 P replication fork processing
GO:0035101 C FACT complex
GO:0042393 F histone binding
GO:0042555 C MCM complex
GO:0043596 C nuclear replication fork
FPKM:1.65 TPM:1.78
1153 A_BomoOtmSK_comp10428_c0_seq3
757bp
 ankyrin_repeat,_SAM_and_basic_leucine_zipper_domain-containing_protein_1_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0007140 P male meiotic nuclear division
GO:0007275 P multicellular organism development
GO:0007283 P spermatogenesis
GO:0030154 P cell differentiation
GO:0031047 P gene silencing by RNA
GO:0034587 P piRNA metabolic process
GO:0043046 P DNA methylation involved in gamete generation
GO:0051321 P meiotic cell cycle
GO:0071546 C pi-body
FPKM:1.48 TPM:1.60
1154 A_BomoOtmSK_comp1042939_c0_seq1
250bp
FPKM:0.60 TPM:0.65
1155 A_BomoOtmSK_comp1042968_c0_seq1
264bp
FPKM:1.02 TPM:1.10
1156 A_BomoOtmSK_comp10429_c0_seq1
1419bp
FPKM:4.98 TPM:5.37
1157 A_BomoOtmSK_comp1043001_c0_seq1
214bp
 adenylate_kinase_9-like,_partial_[Bombyx_mori]
FPKM:0.00 TPM:0.00
1158 A_BomoOtmSK_comp104302_c0_seq1
766bp
 serine_protease_inhibitor_dipetalogastin_isoform_X1_[Bombyx_mori]
GO:0004867 F serine-type endopeptidase inhibitor activity
GO:0005575 C cellular_component
GO:0005576 C extracellular region
GO:0010466 P negative regulation of peptidase activity
GO:0010951 P negative regulation of endopeptidase activity
GO:0030414 F peptidase inhibitor activity
GO:0050819 P negative regulation of coagulation
FPKM:5.03 TPM:5.43
1159 A_BomoOtmSK_comp1043031_c0_seq1
244bp
 uncharacterized_protein_LOC101736466_[Bombyx_mori]
FPKM:0.65 TPM:0.70
1160 A_BomoOtmSK_comp1043033_c0_seq1
219bp
FPKM:0.00 TPM:0.00
1161 A_BomoOtmSK_comp1043065_c0_seq1
268bp
FPKM:1.46 TPM:1.58
1162 A_BomoOtmSK_comp1043100_c0_seq1
209bp
FPKM:2.34 TPM:2.52
1163 A_BomoOtmSK_comp1043110_c0_seq1
217bp
FPKM:2.00 TPM:2.15
1164 A_BomoOtmSK_comp1043157_c0_seq1
307bp
FPKM:0.68 TPM:0.74
1165 A_BomoOtmSK_comp1043179_c0_seq1
245bp
FPKM:1.28 TPM:1.38
1166 A_BomoOtmSK_comp10431_c0_seq1
3465bp
 GTP-binding_protein_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000177 C cytoplasmic exosome (RNase complex)
GO:0003746 F translation elongation factor activity
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006414 P translational elongation
GO:0016020 C membrane
GO:0044822 F RNA binding
GO:0061014 P positive regulation of mRNA catabolic process
FPKM:17.59 TPM:18.96
1167 A_BomoOtmSK_comp1043210_c0_seq1
345bp
FPKM:0.79 TPM:0.85
1168 A_BomoOtmSK_comp1043234_c0_seq1
255bp
FPKM:0.56 TPM:0.61
1169 A_BomoOtmSK_comp1043269_c0_seq1
202bp
FPKM:2.72 TPM:2.94
1170 A_BomoOtmSK_comp1043277_c0_seq1
201bp
FPKM:1.39 TPM:1.50
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