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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
2221 A_BomaASG_c13284_g1_i2
849bp
FPKM:17.84 TPM:13.96
2222 A_BomaASG_c13285_g1_i1
750bp
FPKM:1.74 TPM:1.36
2223 A_BomaASG_c13286_g1_i1
499bp
FPKM:0.00 TPM:0.00
2224 A_BomaASG_c13286_g1_i2
781bp
FPKM:4.79 TPM:3.75
2225 A_BomaASG_c13287_g1_i1
577bp
organic_cation_transporter_protein_[Bombyx_mori]
FPKM:1.94 TPM:1.52
2226 A_BomaASG_c13288_g1_i1
338bp
transposase_[Attacus_atlas]
GO:0000014 F single-stranded DNA endodeoxyribonuclease activity
GO:0000729 P DNA double-strand break processing
GO:0000737 P DNA catabolic process, endonucleolytic
GO:0000793 C condensed chromosome
GO:0003677 F DNA binding
GO:0003690 F double-stranded DNA binding
GO:0003697 F single-stranded DNA binding
GO:0003824 F catalytic activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006281 P DNA repair
GO:0006303 P double-strand break repair via nonhomologous end joining
GO:0006974 P cellular response to DNA damage stimulus
GO:0008152 P metabolic process
GO:0008168 F methyltransferase activity
GO:0008270 F zinc ion binding
GO:0008283 P cell population proliferation
GO:0010452 P histone H3-K36 methylation
GO:0015074 P DNA integration
GO:0016568 P chromatin organization
GO:0016740 F transferase activity
GO:0016787 F hydrolase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0031297 P replication fork processing
GO:0032259 P methylation
GO:0034968 P histone lysine methylation
GO:0035861 C site of double-strand break
GO:0042800 F histone methyltransferase activity (H3-K4 specific)
GO:0042803 F protein homodimerization activity
GO:0043566 F DNA binding
GO:0044547 F DNA topoisomerase binding
GO:0044774 P mitotic DNA integrity checkpoint signaling
GO:0046872 F metal ion binding
GO:0046975 F histone methyltransferase activity (H3-K36 specific)
GO:0051568 P histone H3-K4 methylation
GO:0071157 P regulation of cell cycle
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0097676 P histone H3-K36 dimethylation
GO:2000373 P positive regulation of DNA topoisomerase (ATP-hydrolyzing) activity
GO:2001034 P positive regulation of double-strand break repair via nonhomologous end joining
GO:2001251 P negative regulation of chromosome organization
FPKM:2.38 TPM:1.86
2227 A_BomaASG_c13289_g1_i1
324bp
FPKM:7.40 TPM:5.79
2228 A_BomaASG_c1328_g1_i1
207bp
special_homeobox_protein_7_[Bombyx_mori]
FPKM:2.90 TPM:2.27
2229 A_BomaASG_c13290_g1_i1
229bp
uncharacterized_LOC101743290_precursor_[Bombyx_mori]
GO:0005319 F lipid transporter activity
GO:0005576 C extracellular region
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0008289 F lipid binding
GO:0016055 P Wnt signaling pathway
FPKM:2.85 TPM:2.23
2230 A_BomaASG_c13291_g1_i1
239bp
72_kDa_inositol_polyphosphate_5-phosphatase_isoform_X2_[Bombyx_mori]
GO:0004438 F phosphatidylinositol-3-phosphatase activity
GO:0004439 F phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity
GO:0005737 C cytoplasm
GO:0006810 P transport
GO:0006897 P endocytosis
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0030479 C actin cortical patch
GO:0036092 P phosphatidylinositol-3-phosphate biosynthetic process
GO:0042578 F phosphoric ester hydrolase activity
GO:0043812 F phosphatidylinositol-4-phosphate phosphatase activity
GO:0043813 F phosphatidylinositol-3,5-bisphosphate 5-phosphatase activity
GO:0046856 P phosphatidylinositol dephosphorylation
FPKM:1.90 TPM:1.49
2231 A_BomaASG_c13292_g1_i1
291bp
DNA_polymerase_epsilon_catalytic_subunit_A_[Bombyx_mori]
GO:0000082 P G1/S transition of mitotic cell cycle
GO:0000166 F nucleotide binding
GO:0000722 P telomere maintenance via recombination
GO:0000731 P DNA synthesis involved in DNA repair
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003887 F DNA-directed DNA polymerase activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005886 C plasma membrane
GO:0006260 P DNA replication
GO:0006270 P DNA replication initiation
GO:0006281 P DNA repair
GO:0006287 P base-excision repair, gap-filling
GO:0006297 P nucleotide-excision repair, DNA gap filling
GO:0006974 P cellular response to DNA damage stimulus
GO:0008270 F zinc ion binding
GO:0008408 F 3'-5' exonuclease activity
GO:0008622 C epsilon DNA polymerase complex
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0046872 F metal ion binding
GO:0048568 P embryonic organ development
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:4.39 TPM:3.43
2232 A_BomaASG_c13293_g1_i1
459bp
kalirin_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0035023 P regulation of Rho protein signal transduction
GO:0043547 P positive regulation of GTPase activity
FPKM:3.76 TPM:2.94
2233 A_BomaASG_c13293_g2_i1
210bp
kalirin_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006468 P protein phosphorylation
GO:0007185 P transmembrane receptor protein tyrosine phosphatase signaling pathway
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0019899 F enzyme binding
GO:0035023 P regulation of Rho protein signal transduction
GO:0043065 P positive regulation of apoptotic process
GO:0043547 P positive regulation of GTPase activity
GO:0051056 P regulation of small GTPase mediated signal transduction
FPKM:2.77 TPM:2.16
2234 A_BomaASG_c13296_g1_i1
326bp
uncharacterized_protein_LOC105842278,_partial_[Bombyx_mori]
FPKM:0.95 TPM:0.75
2235 A_BomaASG_c13298_g1_i1
335bp
TRAF3-interacting_protein_1_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005856 C cytoskeleton
GO:0005929 C cilium
GO:0008017 F microtubule binding
GO:0030030 P cell projection organization
GO:0030992 C intraciliary transport particle B
GO:0042073 P intraciliary transport
GO:0042384 P cilium assembly
GO:0042995 C cell projection
GO:0048793 P pronephros development
GO:0070507 P regulation of microtubule cytoskeleton organization
FPKM:3.32 TPM:2.60
2236 A_BomaASG_c13299_g1_i1
681bp
FPKM:3.52 TPM:2.76
2237 A_BomaASG_c132_g1_i1
429bp
FPKM:6.16 TPM:4.82
2238 A_BomaASG_c13300_g1_i1
706bp
collagen_isoform_X2_[Bombyx_mori]
FPKM:3.76 TPM:2.94
2239 A_BomaASG_c13302_g1_i1
203bp
LOW_QUALITY_PROTEIN:_notch-like_protein_isoform_X1_[Bombyx_mori]
GO:0001658 P branching involved in ureteric bud morphogenesis
GO:0001736 P establishment of planar polarity
GO:0001822 P kidney development
GO:0003007 P heart morphogenesis
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005886 C plasma membrane
GO:0007009 P plasma membrane organization
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007157 P heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0007219 P Notch signaling pathway
GO:0008543 P fibroblast growth factor receptor signaling pathway
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0021987 P cerebral cortex development
GO:0022008 P neurogenesis
GO:0035329 P hippo signaling
GO:0043931 P ossification involved in bone maturation
GO:0045177 C apical part of cell
GO:0048565 P digestive tract development
GO:0060122 P inner ear receptor cell stereocilium organization
GO:0070062 C extracellular exosome
GO:0072006 P nephron development
GO:0072137 P condensed mesenchymal cell proliferation
GO:0072307 P regulation of metanephric nephron tubule epithelial cell differentiation
FPKM:7.22 TPM:5.65
2240 A_BomaASG_c13303_g1_i1
922bp
FPKM:3.84 TPM:3.00
2241 A_BomaASG_c13304_g1_i1
419bp
FPKM:4.95 TPM:3.87
2242 A_BomaASG_c13306_g1_i1
256bp
FPKM:1.60 TPM:1.25
2243 A_BomaASG_c13307_g1_i1
333bp
FPKM:2.14 TPM:1.67
2244 A_BomaASG_c13308_g1_i1
390bp
FPKM:3.24 TPM:2.54
2245 A_BomaASG_c13310_g1_i1
394bp
FPKM:1.82 TPM:1.43
2246 A_BomaASG_c13312_g1_i1
386bp
FPKM:3.06 TPM:2.40
2247 A_BomaASG_c13313_g1_i1
525bp
FPKM:4.12 TPM:3.23
2248 A_BomaASG_c13314_g1_i1
585bp
uncharacterized_protein_LOC101745524_isoform_X3_[Bombyx_mori]
FPKM:1.01 TPM:0.79
2249 A_BomaASG_c13315_g1_i1
488bp
LOW_QUALITY_PROTEIN:_dynein_heavy_chain_8,_axonemal_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003341 P cilium movement
GO:0003774 F cytoskeletal motor activity
GO:0003777 F microtubule motor activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005858 C axonemal dynein complex
GO:0005874 C microtubule
GO:0005929 C cilium
GO:0005930 C axoneme
GO:0007018 P microtubule-based movement
GO:0007368 P determination of left/right symmetry
GO:0007507 P heart development
GO:0008152 P metabolic process
GO:0016887 F ATP hydrolysis activity
GO:0021670 P lateral ventricle development
GO:0030286 C dynein complex
GO:0030317 P flagellated sperm motility
GO:0036157 C outer dynein arm
GO:0036158 P outer dynein arm assembly
GO:0042384 P cilium assembly
GO:0042995 C cell projection
FPKM:1.64 TPM:1.28
2250 A_BomaASG_c13316_g1_i1
419bp
FPKM:4.13 TPM:3.23
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