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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
2251 A_BomaASG_c13318_g1_i1
453bp
gamma-glutamyl_transpeptidase_isoform_X1_[Bombyx_mori]
GO:0002682 P regulation of immune system process
GO:0003840 F obsolete gamma-glutamyltransferase activity
GO:0005615 C extracellular space
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006508 P proteolysis
GO:0006536 P glutamate metabolic process
GO:0006749 P glutathione metabolic process
GO:0006750 P glutathione biosynthetic process
GO:0006751 P glutathione catabolic process
GO:0007283 P spermatogenesis
GO:0008233 F peptidase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0016787 F hydrolase activity
GO:0019344 P cysteine biosynthetic process
GO:0019370 P leukotriene biosynthetic process
GO:0031638 P zymogen activation
GO:0031988 C vesicle
GO:0036374 F glutathione hydrolase activity
GO:0050727 P regulation of inflammatory response
GO:0060427 P lung connective tissue development
GO:0070062 C extracellular exosome
GO:0071260 P cellular response to mechanical stimulus
FPKM:1.28 TPM:1.00
2252 A_BomaASG_c1331_g1_i1
215bp
zinc_finger_protein_431-like_[Bombyx_mori]
FPKM:3.43 TPM:2.68
2253 A_BomaASG_c13320_g1_i1
394bp
hypothetical_protein_[Acinetobacter_baumannii]
FPKM:1.82 TPM:1.43
2254 A_BomaASG_c13322_g1_i1
245bp
FPKM:1.78 TPM:1.39
2255 A_BomaASG_c13323_g1_i1
3109bp
E3_ubiquitin-protein_ligase_Su(dx)_[Bombyx_mori]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005112 F Notch binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005938 C cell cortex
GO:0007219 P Notch signaling pathway
GO:0007275 P multicellular organism development
GO:0008586 P imaginal disc-derived wing vein morphogenesis
GO:0008587 P imaginal disc-derived wing margin morphogenesis
GO:0016348 P imaginal disc-derived leg joint morphogenesis
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0019904 F protein domain specific binding
GO:0019915 P lipid storage
GO:0031623 P receptor internalization
GO:0032880 P regulation of protein localization
GO:0035209 P pupal development
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0045746 P negative regulation of Notch signaling pathway
GO:0048190 P wing disc dorsal/ventral pattern formation
FPKM:27.38 TPM:21.43
2256 A_BomaASG_c13324_g1_i1
863bp
TBC1_domain_family_member_16_[Bombyx_mori]
GO:0001919 P regulation of receptor recycling
GO:0005096 F GTPase activator activity
GO:0005515 F protein binding
GO:0005769 C early endosome
GO:0005829 C cytosol
GO:0006886 P intracellular protein transport
GO:0017137 F small GTPase binding
GO:0031338 P regulation of vesicle fusion
GO:0090630 P activation of GTPase activity
GO:1902017 P regulation of cilium assembly
FPKM:3.08 TPM:2.41
2257 A_BomaASG_c13325_g1_i1
508bp
FPKM:4.32 TPM:3.38
2258 A_BomaASG_c13326_g1_i1
243bp
FPKM:3.64 TPM:2.85
2259 A_BomaASG_c13327_g1_i1
731bp
FPKM:3.41 TPM:2.67
2260 A_BomaASG_c13330_g1_i1
270bp
FPKM:5.17 TPM:4.04
2261 A_BomaASG_c13331_g1_i1
204bp
FPKM:9.13 TPM:7.14
2262 A_BomaASG_c13333_g1_i1
646bp
WD_repeat-containing_protein_19_isoform_X4_[Bombyx_mori]
GO:0000902 P cell morphogenesis
GO:0001701 P in utero embryonic development
GO:0003674 F molecular_function
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005929 C cilium
GO:0007224 P smoothened signaling pathway
GO:0008406 P gonad development
GO:0030030 P cell projection organization
GO:0030326 P embryonic limb morphogenesis
GO:0030991 C intraciliary transport particle A
GO:0031076 P embryonic camera-type eye development
GO:0031513 C non-motile cilium
GO:0031514 C motile cilium
GO:0032391 C photoreceptor connecting cilium
GO:0035721 P intraciliary retrograde transport
GO:0042384 P cilium assembly
GO:0042471 P ear morphogenesis
GO:0042995 C cell projection
GO:0048701 P embryonic cranial skeleton morphogenesis
GO:0050877 P nervous system process
GO:0055123 P digestive system development
GO:0060271 P cilium assembly
GO:0060830 P ciliary receptor clustering involved in smoothened signaling pathway
GO:0060831 P smoothened signaling pathway involved in dorsal/ventral neural tube patterning
GO:0061055 P myotome development
GO:0061512 P protein localization to cilium
FPKM:3.11 TPM:2.43
2263 A_BomaASG_c13334_g1_i1
270bp
FPKM:2.82 TPM:2.21
2264 A_BomaASG_c13335_g1_i1
204bp
FPKM:1.01 TPM:0.79
2265 A_BomaASG_c13336_g1_i1
227bp
hypothetical_protein_RR46_00741_[Papilio_xuthus]
GO:0003674 F molecular_function
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0008150 P biological_process
GO:0046872 F metal ion binding
FPKM:6.57 TPM:5.14
2266 A_BomaASG_c13337_g1_i1
213bp
FPKM:2.65 TPM:2.07
2267 A_BomaASG_c13337_g1_i2
232bp
FPKM:2.06 TPM:1.61
2268 A_BomaASG_c13338_g1_i1
300bp
putative_nuclease_HARBI1,_partial_[Pseudomyrmex_gracilis]
FPKM:1.50 TPM:1.17
2269 A_BomaASG_c13340_g1_i1
350bp
uncharacterized_RING_finger_protein_C548.05c-like_[Bombyx_mori]
GO:0005634 C nucleus
GO:0006368 P transcription elongation from RNA polymerase II promoter
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0032184 F SUMO polymer binding
GO:0033234 P negative regulation of protein sumoylation
GO:0033768 C SUMO-targeted ubiquitin ligase complex
GO:0034080 P CENP-A containing chromatin assembly
GO:0035861 C site of double-strand break
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0044732 C mitotic spindle pole body
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
FPKM:3.91 TPM:3.06
2270 A_BomaASG_c13341_g1_i1
319bp
FPKM:2.98 TPM:2.33
2271 A_BomaASG_c13342_g1_i1
982bp
NADH_dehydrogenase_[ubiquinone]_1_subunit_C2_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005747 C mitochondrial respiratory chain complex I
GO:0006120 P mitochondrial electron transport, NADH to ubiquinone
GO:0008137 F NADH dehydrogenase (ubiquinone) activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0055114 P obsolete oxidation-reduction process
GO:0070469 C respirasome
FPKM:39.44 TPM:30.86
2272 A_BomaASG_c13343_g1_i1
287bp
FPKM:3.29 TPM:2.57
2273 A_BomaASG_c13344_g1_i1
558bp
FPKM:4.46 TPM:3.49
2274 A_BomaASG_c13346_g1_i1
406bp
uncharacterized_protein_LOC101739130_isoform_X1_[Bombyx_mori]
FPKM:1.95 TPM:1.53
2275 A_BomaASG_c13346_g2_i1
331bp
uncharacterized_protein_LOC101739130_isoform_X2_[Bombyx_mori]
FPKM:2.47 TPM:1.93
2276 A_BomaASG_c13347_g1_i1
339bp
hypothetical_protein_ALC57_15604_[Trachymyrmex_cornetzi]
FPKM:2.37 TPM:1.85
2277 A_BomaASG_c13348_g1_i1
400bp
adenylate_kinase_isoenzyme_6_homolog_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004017 F adenylate kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0015030 C Cajal body
GO:0015949 P nucleobase-containing small molecule interconversion
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016887 F ATP hydrolysis activity
GO:0046939 P nucleotide phosphorylation
GO:0046940 P nucleoside monophosphate phosphorylation
GO:0050145 F nucleoside monophosphate kinase activity
FPKM:3.56 TPM:2.78
2278 A_BomaASG_c13349_g1_i1
454bp
FPKM:3.28 TPM:2.57
2279 A_BomaASG_c1334_g1_i1
209bp
FPKM:5.62 TPM:4.40
2280 A_BomaASG_c13351_g1_i1
214bp
FPKM:0.00 TPM:0.00
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