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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
2161 A_BomaASG_c13213_g1_i1
335bp
tyrosine-protein_phosphatase_10D_[Bombyx_mori]
GO:0004721 F phosphoprotein phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0004728 F obsolete signal transducer, downstream of receptor, with protein tyrosine phosphatase activity
GO:0005001 F transmembrane receptor protein tyrosine phosphatase activity
GO:0005886 C plasma membrane
GO:0006470 P protein dephosphorylation
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0007411 P axon guidance
GO:0007417 P central nervous system development
GO:0007424 P open tracheal system development
GO:0007616 P long-term memory
GO:0008045 P motor neuron axon guidance
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0023014 P signal transduction
GO:0030154 P cell differentiation
GO:0030424 C axon
GO:0035335 P peptidyl-tyrosine dephosphorylation
GO:0045177 C apical part of cell
FPKM:41.10 TPM:32.16
2162 A_BomaASG_c13214_g1_i1
445bp
FPKM:3.19 TPM:2.50
2163 A_BomaASG_c13215_g1_i1
2784bp
LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101747087_[Bombyx_mori]
GO:0001701 P in utero embryonic development
GO:0004222 F metalloendopeptidase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005798 C Golgi-associated vesicle
GO:0005802 C trans-Golgi network
GO:0006468 P protein phosphorylation
GO:0006508 P proteolysis
GO:0006509 P membrane protein ectodomain proteolysis
GO:0007162 P negative regulation of cell adhesion
GO:0007219 P Notch signaling pathway
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0009986 C cell surface
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0017124 F SH3 domain binding
GO:0019901 F protein kinase binding
GO:0042803 F protein homodimerization activity
GO:0045670 P regulation of osteoclast differentiation
GO:0046872 F metal ion binding
FPKM:21.26 TPM:16.63
2164 A_BomaASG_c13216_g1_i1
2476bp
acylamino-acid-releasing_enzyme_[Bombyx_mori]
GO:0004252 F serine-type endopeptidase activity
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0008236 F serine-type peptidase activity
GO:0016787 F hydrolase activity
FPKM:21.12 TPM:16.52
2165 A_BomaASG_c13217_g1_i1
549bp
N-terminal_kinase-like_protein_[Papilio_xuthus]
FPKM:1.38 TPM:1.08
2166 A_BomaASG_c1321_g1_i1
364bp
FPKM:0.78 TPM:0.61
2167 A_BomaASG_c1321_g1_i2
217bp
FPKM:3.33 TPM:2.61
2168 A_BomaASG_c13220_g1_i1
1003bp
helix-loop-helix_protein_2-like_[Bombyx_mori]
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0000981 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0001228 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0007275 P multicellular organism development
GO:0030154 P cell differentiation
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046983 F protein dimerization activity
FPKM:15.42 TPM:12.07
2169 A_BomaASG_c13220_g1_i2
1007bp
helix-loop-helix_protein_2-like_[Bombyx_mori]
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0000981 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0001228 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0007275 P multicellular organism development
GO:0030154 P cell differentiation
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046983 F protein dimerization activity
FPKM:1.68 TPM:1.31
2170 A_BomaASG_c13224_g1_i1
705bp
archease_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0006388 P tRNA splicing, via endonucleolytic cleavage and ligation
GO:0008033 P tRNA processing
GO:0022008 P neurogenesis
GO:0046872 F metal ion binding
GO:0048680 P positive regulation of axon regeneration
GO:0072669 C tRNA-splicing ligase complex
FPKM:34.84 TPM:27.26
2171 A_BomaASG_c13225_g1_i1
658bp
glycerol-3-phosphate_dehydrogenase_isoform_X1_[Bombyx_mori]
FPKM:2.60 TPM:2.04
2172 A_BomaASG_c13226_g1_i1
498bp
targeting_protein_for_Xklp2-like_[Bombyx_mori]
FPKM:1.43 TPM:1.12
2173 A_BomaASG_c13227_g1_i1
285bp
FPKM:1.25 TPM:0.98
2174 A_BomaASG_c13228_g1_i1
215bp
FPKM:4.28 TPM:3.35
2175 A_BomaASG_c13229_g1_i1
1464bp
lethal(3)malignant_brain_tumor-like_protein_3_isoform_X2_[Bombyx_mori]
FPKM:2.25 TPM:1.76
2176 A_BomaASG_c1322_g1_i1
378bp
FPKM:3.42 TPM:2.67
2177 A_BomaASG_c13233_g1_i1
754bp
LOW_QUALITY_PROTEIN:_protein_scabrous_[Bombyx_mori]
GO:0004871 F obsolete signal transducer activity
GO:0005576 C extracellular region
GO:0005768 C endosome
GO:0005770 C late endosome
GO:0007219 P Notch signaling pathway
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0007460 P R8 cell fate commitment
GO:0008407 P chaeta morphogenesis
GO:0008587 P imaginal disc-derived wing margin morphogenesis
GO:0016318 P ommatidial rotation
GO:0016321 P female meiosis chromosome segregation
GO:0030154 P cell differentiation
GO:0045468 P regulation of R8 cell spacing in compound eye
GO:0046331 P lateral inhibition
GO:0048749 P compound eye development
GO:0097305 P response to alcohol
FPKM:1.73 TPM:1.35
2178 A_BomaASG_c13234_g1_i1
680bp
telomerase_Cajal_body_protein_1_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005697 C telomerase holoenzyme complex
GO:0005737 C cytoplasm
GO:0007004 P telomere maintenance via telomerase
GO:0015030 C Cajal body
GO:0032203 P telomere formation via telomerase
GO:0032212 P positive regulation of telomere maintenance via telomerase
GO:0032403 F protein-containing complex binding
GO:0051087 F chaperone binding
GO:0051973 P positive regulation of telomerase activity
GO:0070034 F telomerase RNA binding
GO:0070200 P establishment of protein localization to telomere
GO:0090666 P scaRNA localization to Cajal body
GO:0090671 P telomerase RNA localization to Cajal body
GO:1904851 P positive regulation of establishment of protein localization to telomere
GO:1904867 P protein localization to Cajal body
FPKM:1.66 TPM:1.30
2179 A_BomaASG_c13235_g1_i1
913bp
Uncharacterized_protein_OBRU01_24605_[Operophtera_brumata]
FPKM:44.32 TPM:34.68
2180 A_BomaASG_c13235_g2_i1
674bp
Uncharacterized_protein_OBRU01_24605_[Operophtera_brumata]
FPKM:4.85 TPM:3.80
2181 A_BomaASG_c13236_g1_i1
220bp
FPKM:6.39 TPM:5.00
2182 A_BomaASG_c13237_g1_i1
471bp
FPKM:32.07 TPM:25.09
2183 A_BomaASG_c13238_g1_i1
410bp
FPKM:5.13 TPM:4.01
2184 A_BomaASG_c13239_g1_i1
1790bp
adenomatous_polyposis_coli_protein_isoform_X2_[Bombyx_mori]
FPKM:22.43 TPM:17.55
2185 A_BomaASG_c13242_g1_i1
778bp
FPKM:2.34 TPM:1.83
2186 A_BomaASG_c13242_g1_i2
739bp
FPKM:1.24 TPM:0.97
2187 A_BomaASG_c13248_g1_i1
394bp
mediator_of_RNA_polymerase_II_transcription_subunit_13_[Bombyx_mori]
GO:0001104 F transcription coregulator activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006366 P transcription by RNA polymerase II
GO:0016592 C mediator complex
FPKM:7.52 TPM:5.88
2188 A_BomaASG_c1324_g1_i1
224bp
FPKM:1.52 TPM:1.19
2189 A_BomaASG_c13254_g1_i1
362bp
FPKM:0.00 TPM:0.00
2190 A_BomaASG_c13254_g1_i2
756bp
FPKM:14.97 TPM:11.72
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