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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1951 A_BomaASG_c12959_g1_i1
215bp
FPKM:3.43 TPM:2.68
1952 A_BomaASG_c12960_g1_i1
310bp
FPKM:3.51 TPM:2.74
1953 A_BomaASG_c12961_g1_i1
227bp
FPKM:8.76 TPM:6.85
1954 A_BomaASG_c12962_g1_i1
235bp
uncharacterized_protein_LOC101738918_[Bombyx_mori]
FPKM:5.18 TPM:4.06
1955 A_BomaASG_c12962_g1_i2
434bp
uncharacterized_protein_LOC101738918_[Bombyx_mori]
FPKM:2.77 TPM:2.17
1956 A_BomaASG_c12963_g1_i1
410bp
FPKM:2.56 TPM:2.01
1957 A_BomaASG_c12964_g1_i1
211bp
FPKM:2.73 TPM:2.13
1958 A_BomaASG_c12965_g1_i1
229bp
FPKM:5.69 TPM:4.46
1959 A_BomaASG_c12967_g1_i1
424bp
FPKM:2.23 TPM:1.74
1960 A_BomaASG_c12969_g1_i1
366bp
zinc_finger_protein_235_isoform_X2_[Bombyx_mori]
FPKM:2.58 TPM:2.02
1961 A_BomaASG_c1296_g1_i1
338bp
FPKM:1.78 TPM:1.40
1962 A_BomaASG_c12970_g1_i1
484bp
FPKM:5.80 TPM:4.54
1963 A_BomaASG_c12971_g1_i1
316bp
seroin-like_[Bombyx_mori]
FPKM:3.71 TPM:2.91
1964 A_BomaASG_c12972_g1_i1
569bp
reverse_transcriptase,_partial_[Bombyx_mori]
FPKM:2.11 TPM:1.65
1965 A_BomaASG_c12972_g1_i2
405bp
FPKM:0.00 TPM:0.00
1966 A_BomaASG_c12975_g1_i1
331bp
rotatin_isoform_X4_[Bombyx_mori]
FPKM:4.33 TPM:3.38
1967 A_BomaASG_c12976_g1_i1
218bp
FPKM:1.64 TPM:1.29
1968 A_BomaASG_c12977_g1_i1
364bp
FPKM:1.56 TPM:1.22
1969 A_BomaASG_c12979_g1_i1
314bp
polyhomeotic_isoform_X5_[Bombyx_mori]
GO:0000070 P mitotic sister chromatid segregation
GO:0001047 F core promoter sequence-specific DNA binding
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006342 P heterochromatin assembly
GO:0007275 P multicellular organism development
GO:0008270 F zinc ion binding
GO:0016458 P obsolete gene silencing
GO:0021954 P central nervous system neuron development
GO:0030708 P germarium-derived female germ-line cyst encapsulation
GO:0030713 P ovarian follicle cell stalk formation
GO:0035075 P response to ecdysone
GO:0035102 C PRC1 complex
GO:0035186 P syncytial blastoderm mitotic cell cycle
GO:0044547 F DNA topoisomerase binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0051087 F chaperone binding
FPKM:3.76 TPM:2.94
1970 A_BomaASG_c12980_g1_i1
509bp
FPKM:4.16 TPM:3.25
1971 A_BomaASG_c12982_g1_i1
209bp
FPKM:14.17 TPM:11.08
1972 A_BomaASG_c12982_g1_i2
497bp
uncharacterized_protein_LOC110385160_[Bombyx_mori]
FPKM:6.35 TPM:4.97
1973 A_BomaASG_c12985_g1_i1
243bp
FPKM:3.03 TPM:2.37
1974 A_BomaASG_c12986_g1_i1
285bp
FPKM:2.08 TPM:1.63
1975 A_BomaASG_c12987_g1_i1
743bp
FPKM:3.62 TPM:2.83
1976 A_BomaASG_c12988_g1_i1
812bp
uncharacterized_protein_LOC101736188_isoform_X1_[Bombyx_mori]
GO:0005375 F copper ion transmembrane transporter activity
GO:0005770 C late endosome
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006825 P copper ion transport
GO:0006878 P cellular copper ion homeostasis
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0035434 P copper ion transmembrane transport
GO:0055037 C recycling endosome
GO:1902311 P regulation of copper ion transmembrane transport
FPKM:3.74 TPM:2.92
1977 A_BomaASG_c12989_g1_i1
226bp
FPKM:2.96 TPM:2.31
1978 A_BomaASG_c1298_g1_i1
2557bp
hydroxyacyl-coenzyme_A_dehydrogenase_[Bombyx_mori]
GO:0000062 F fatty-acyl-CoA binding
GO:0003824 F catalytic activity
GO:0003857 F 3-hydroxyacyl-CoA dehydrogenase activity
GO:0003985 F acetyl-CoA C-acetyltransferase activity
GO:0003988 F acetyl-CoA C-acyltransferase activity
GO:0004300 F enoyl-CoA hydratase activity
GO:0005515 F protein binding
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006635 P fatty acid beta-oxidation
GO:0008152 P metabolic process
GO:0016491 F oxidoreductase activity
GO:0016507 C mitochondrial fatty acid beta-oxidation multienzyme complex
GO:0016508 F long-chain-enoyl-CoA hydratase activity
GO:0016509 F long-chain-3-hydroxyacyl-CoA dehydrogenase activity
GO:0016829 F lyase activity
GO:0032403 F protein-containing complex binding
GO:0032868 P response to insulin
GO:0035965 P cardiolipin acyl-chain remodeling
GO:0042493 P response to xenobiotic stimulus
GO:0042645 C mitochondrial nucleoid
GO:0051287 F NAD binding
GO:0055114 P obsolete oxidation-reduction process
FPKM:45.31 TPM:35.45
1979 A_BomaASG_c12990_g1_i1
256bp
FPKM:0.53 TPM:0.42
1980 A_BomaASG_c12991_g1_i1
285bp
FPKM:2.08 TPM:1.63
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