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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1981 A_BomaASG_c12993_g1_i1
1235bp
uncharacterized_protein_LOC101740737_[Bombyx_mori]
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005705 C polytene chromosome interband
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006366 P transcription by RNA polymerase II
GO:0007416 P synapse assembly
GO:0007611 P learning or memory
GO:0007613 P memory
GO:0007616 P long-term memory
GO:0008345 P larval locomotory behavior
GO:0008355 P olfactory learning
GO:0040011 P locomotion
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048813 P dendrite morphogenesis
GO:0050773 P regulation of dendrite development
FPKM:29.20 TPM:22.85
1982 A_BomaASG_c12994_g1_i1
354bp
FPKM:1.37 TPM:1.07
1983 A_BomaASG_c12996_g1_i1
286bp
FPKM:7.86 TPM:6.15
1984 A_BomaASG_c12997_g1_i1
321bp
FPKM:9.17 TPM:7.18
1985 A_BomaASG_c12999_g1_i1
345bp
putative_nuclease_HARBI1_[Helicoverpa_armigera]
FPKM:1.43 TPM:1.12
1986 A_BomaASG_c1299_g1_i1
297bp
FPKM:1.91 TPM:1.50
1987 A_BomaASG_c129_g1_i1
228bp
uncharacterized_protein_LOC110385214_[Bombyx_mori]
FPKM:2.16 TPM:1.69
1988 A_BomaASG_c12_g1_i1
255bp
uncharacterized_protein_LOC101738890_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004523 F RNA-DNA hybrid ribonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0008152 P metabolic process
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046718 P viral entry into host cell
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0075713 P establishment of integrated proviral latency
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
FPKM:1.61 TPM:1.26
1989 A_BomaASG_c13002_g1_i1
572bp
FPKM:2.48 TPM:1.94
1990 A_BomaASG_c13004_g1_i1
404bp
FPKM:1.84 TPM:1.44
1991 A_BomaASG_c13004_g1_i2
478bp
FPKM:1.45 TPM:1.13
1992 A_BomaASG_c13005_g1_i1
298bp
FPKM:1.90 TPM:1.49
1993 A_BomaASG_c13007_g1_i1
355bp
FPKM:12.24 TPM:9.58
1994 A_BomaASG_c13009_g1_i1
387bp
FPKM:2.58 TPM:2.02
1995 A_BomaASG_c1300_g1_i1
255bp
maltase_A1_[Bombyx_mori]
GO:0000023 P maltose metabolic process
GO:0003824 F catalytic activity
GO:0004558 F alpha-1,4-glucosidase activity
GO:0005975 P carbohydrate metabolic process
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0032450 F maltose alpha-glucosidase activity
GO:0043169 F cation binding
FPKM:3.76 TPM:2.94
1996 A_BomaASG_c13014_g1_i1
359bp
endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:1.87 TPM:1.46
1997 A_BomaASG_c13015_g1_i1
269bp
enoyl-CoA_hydratase_domain-containing_protein_3,_mitochondrial_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0003824 F catalytic activity
GO:0005739 C mitochondrion
GO:0008150 P biological_process
GO:0008152 P metabolic process
FPKM:5.69 TPM:4.45
1998 A_BomaASG_c13016_g1_i1
226bp
FPKM:2.22 TPM:1.73
1999 A_BomaASG_c13019_g1_i1
284bp
hypothetical_protein_RR46_03798_[Papilio_xuthus]
FPKM:3.36 TPM:2.63
2000 A_BomaASG_c1301_g1_i1
311bp
PREDICTED:_uncharacterized_protein_LOC106104514,_partial_[Papilio_polytes]
FPKM:1.39 TPM:1.09
2001 A_BomaASG_c13020_g1_i1
279bp
FPKM:2.62 TPM:2.05
2002 A_BomaASG_c13022_g1_i1
228bp
FPKM:1.44 TPM:1.13
2003 A_BomaASG_c13022_g2_i1
206bp
FPKM:3.93 TPM:3.07
2004 A_BomaASG_c13023_g1_i1
347bp
FPKM:1.98 TPM:1.55
2005 A_BomaASG_c13024_g1_i1
209bp
FPKM:5.62 TPM:4.40
2006 A_BomaASG_c13025_g1_i1
237bp
FPKM:1.94 TPM:1.52
2007 A_BomaASG_c13026_g1_i1
533bp
probable_ubiquitin_carboxyl-terminal_hydrolase_creB_[Bombyx_mori]
GO:0004843 F thiol-dependent deubiquitinase
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006284 P base-excision repair
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0035520 P monoubiquitinated protein deubiquitination
GO:0036459 F thiol-dependent deubiquitinase
GO:0042981 P regulation of apoptotic process
GO:0045892 P negative regulation of transcription, DNA-templated
FPKM:2.16 TPM:1.69
2008 A_BomaASG_c13028_g1_i1
422bp
Retrovirus-related_Pol_polyprotein_from_transposon_TNT_1-94_[Papilio_machaon]
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:1.43 TPM:1.12
2009 A_BomaASG_c13029_g1_i1
374bp
rapamycin-insensitive_companion_of_mTOR_[Bombyx_mori]
FPKM:2.73 TPM:2.14
2010 A_BomaASG_c1302_g1_i1
355bp
FPKM:1.09 TPM:0.85
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