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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1921 A_BomaASG_c12918_g1_i1
373bp
FPKM:4.99 TPM:3.91
1922 A_BomaASG_c12919_g1_i1
922bp
FPKM:3.56 TPM:2.78
1923 A_BomaASG_c12922_g1_i1
224bp
FPKM:2.27 TPM:1.78
1924 A_BomaASG_c12923_g1_i1
555bp
Histone-lysine_N-methyltransferase_SETMAR,_partial_[Harpegnathos_saltator]
FPKM:4.22 TPM:3.31
1925 A_BomaASG_c12924_g1_i1
543bp
uncharacterized_protein_LOC110386081,_partial_[Bombyx_mori]
FPKM:1.55 TPM:1.21
1926 A_BomaASG_c12925_g1_i1
281bp
FPKM:3.01 TPM:2.35
1927 A_BomaASG_c12927_g1_i1
438bp
FPKM:5.77 TPM:4.52
1928 A_BomaASG_c12930_g1_i1
536bp
zinc_finger_protein_91_isoform_X1_[Bombyx_mori]
FPKM:2.29 TPM:1.79
1929 A_BomaASG_c12932_g1_i1
481bp
FPKM:9.19 TPM:7.19
1930 A_BomaASG_c12933_g1_i1
325bp
PREDICTED:_cytochrome_c_oxidase_assembly_factor_6_homolog_[Amyelois_transitella]
GO:0004129 F cytochrome-c oxidase activity
GO:0005507 F copper ion binding
GO:0005515 F protein binding
GO:0005739 C mitochondrion
GO:0005758 C mitochondrial intermembrane space
GO:0005886 C plasma membrane
GO:0008535 P respiratory chain complex IV assembly
GO:0042774 P plasma membrane ATP synthesis coupled electron transport
GO:0044822 F RNA binding
GO:1902600 P proton transmembrane transport
FPKM:8.64 TPM:6.76
1931 A_BomaASG_c12936_g1_i1
413bp
FPKM:1.69 TPM:1.32
1932 A_BomaASG_c12937_g1_i1
564bp
hypothetical_protein_RR46_14276_[Papilio_xuthus]
FPKM:19.86 TPM:15.54
1933 A_BomaASG_c12938_g1_i1
304bp
FPKM:2.19 TPM:1.71
1934 A_BomaASG_c1293_g1_i1
221bp
FPKM:3.94 TPM:3.08
1935 A_BomaASG_c12942_g1_i1
377bp
FPKM:1.47 TPM:1.15
1936 A_BomaASG_c12944_g1_i1
350bp
cartilage-associated_protein_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005518 F collagen binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0032403 F protein-containing complex binding
GO:0032991 C protein-containing complex
GO:0061077 P chaperone-mediated protein folding
FPKM:5.30 TPM:4.15
1937 A_BomaASG_c12946_g1_i1
417bp
FPKM:2.91 TPM:2.28
1938 A_BomaASG_c12946_g1_i2
399bp
FPKM:0.00 TPM:0.00
1939 A_BomaASG_c12947_g1_i1
409bp
FPKM:4.07 TPM:3.19
1940 A_BomaASG_c12948_g1_i1
324bp
rootletin_[Bombyx_mori]
FPKM:3.22 TPM:2.52
1941 A_BomaASG_c12949_g1_i1
504bp
PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_[Nicrophorus_vespilloides]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
FPKM:1.56 TPM:1.22
1942 A_BomaASG_c1294_g1_i1
513bp
FPKM:3.65 TPM:2.86
1943 A_BomaASG_c12950_g1_i1
430bp
FPKM:2.38 TPM:1.86
1944 A_BomaASG_c12951_g1_i1
381bp
enhancer_of_split_mbeta,_partial_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007219 P Notch signaling pathway
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0030154 P cell differentiation
GO:0043565 F sequence-specific DNA binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046983 F protein dimerization activity
GO:0048749 P compound eye development
FPKM:2.17 TPM:1.70
1945 A_BomaASG_c12952_g1_i1
244bp
FPKM:3.00 TPM:2.35
1946 A_BomaASG_c12953_g1_i1
267bp
FPKM:0.96 TPM:0.75
1947 A_BomaASG_c12954_g1_i1
351bp
FPKM:3.33 TPM:2.61
1948 A_BomaASG_c12955_g1_i1
283bp
reverse_transcriptase,_partial_[Agrius_cingulata]
GO:0003824 F catalytic activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006310 P DNA recombination
GO:0008152 P metabolic process
GO:0009036 F type II site-specific deoxyribonuclease activity
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0032197 P transposition, RNA-mediated
GO:0032199 P reverse transcription involved in RNA-mediated transposition
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:1.69 TPM:1.32
1949 A_BomaASG_c12958_g1_i1
245bp
FPKM:9.51 TPM:7.44
1950 A_BomaASG_c12958_g2_i1
263bp
FPKM:1.50 TPM:1.17
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