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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1891 A_BomaASG_c12884_g1_i1
647bp
transcription_factor_SPT20_homolog_isoform_X1_[Bombyx_mori]
FPKM:1.66 TPM:1.30
1892 A_BomaASG_c12885_g1_i1
251bp
uncharacterized_LOC101743290_precursor_[Bombyx_mori]
FPKM:2.79 TPM:2.19
1893 A_BomaASG_c12886_g1_i1
263bp
FPKM:7.99 TPM:6.25
1894 A_BomaASG_c12887_g1_i1
429bp
nuclear_cap-binding_protein_subunit_3_[Bombyx_mori]
FPKM:3.58 TPM:2.80
1895 A_BomaASG_c12888_g1_i1
280bp
uncharacterized_protein_LOC105842632_[Bombyx_mori]
FPKM:3.03 TPM:2.37
1896 A_BomaASG_c12890_g1_i1
298bp
solute_carrier_family_2,_facilitated_glucose_transporter_member_1_[Bombyx_mori]
FPKM:2.66 TPM:2.08
1897 A_BomaASG_c12892_g1_i1
255bp
FPKM:0.54 TPM:0.42
1898 A_BomaASG_c12892_g2_i1
324bp
FPKM:0.00 TPM:0.00
1899 A_BomaASG_c12892_g2_i2
292bp
FPKM:1.19 TPM:0.93
1900 A_BomaASG_c12893_g1_i1
286bp
FPKM:2.07 TPM:1.62
1901 A_BomaASG_c12895_g1_i1
325bp
hypothetical_protein_RR48_12619_[Papilio_machaon]
FPKM:0.96 TPM:0.75
1902 A_BomaASG_c12897_g1_i1
476bp
monocarboxylate_transporter_3-like_isoform_X2_[Helicoverpa_armigera]
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0008028 F monocarboxylic acid transmembrane transporter activity
GO:0015293 F symporter activity
GO:0015718 P monocarboxylic acid transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0046415 P urate metabolic process
GO:0055085 P transmembrane transport
FPKM:2.38 TPM:1.86
1903 A_BomaASG_c12898_g1_i1
203bp
FPKM:6.19 TPM:4.84
1904 A_BomaASG_c12899_g1_i1
241bp
FPKM:3.10 TPM:2.43
1905 A_BomaASG_c12900_g1_i1
244bp
8-oxo-dGDP_phosphatase_NUDT18_[Bombyx_mori]
FPKM:4.20 TPM:3.29
1906 A_BomaASG_c12901_g1_i1
348bp
FPKM:1.97 TPM:1.54
1907 A_BomaASG_c12903_g1_i1
433bp
uncharacterized_protein_LOC101741752_isoform_X2_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000902 P cell morphogenesis
GO:0001708 P cell fate specification
GO:0001827 P inner cell mass cell fate commitment
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007281 P germ cell development
GO:0007566 P embryo implantation
GO:0008168 F methyltransferase activity
GO:0009566 P fertilization
GO:0010468 P regulation of gene expression
GO:0016740 F transferase activity
GO:0019827 P stem cell population maintenance
GO:0030718 P germ-line stem cell population maintenance
GO:0031490 F chromatin DNA binding
GO:0032259 P methylation
GO:0034972 P histone H3-R26 methylation
GO:0035019 P somatic stem cell population maintenance
GO:0040029 P regulation of gene expression, epigenetic
GO:0040037 P negative regulation of fibroblast growth factor receptor signaling pathway
GO:0044030 P regulation of DNA methylation
GO:0046872 F metal ion binding
GO:0048873 P homeostasis of number of cells within a tissue
GO:0060817 P inactivation of paternal X chromosome
FPKM:2.16 TPM:1.69
1908 A_BomaASG_c12903_g1_i2
280bp
zinc_finger_protein_OZF-like_[Helicoverpa_armigera]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
FPKM:0.00 TPM:0.00
1909 A_BomaASG_c12904_g1_i1
770bp
FPKM:2.22 TPM:1.73
1910 A_BomaASG_c12905_g1_i1
306bp
FPKM:2.52 TPM:1.97
1911 A_BomaASG_c12906_g1_i1
421bp
FPKM:3.28 TPM:2.56
1912 A_BomaASG_c12909_g1_i1
289bp
uncharacterized_protein_LOC105841977_[Bombyx_mori]
FPKM:2.02 TPM:1.58
1913 A_BomaASG_c12910_g1_i1
288bp
FPKM:0.82 TPM:0.64
1914 A_BomaASG_c12912_g1_i1
300bp
H3K9_methyltransferase-like_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000775 C chromosome, centromeric region
GO:0000785 C chromatin
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006333 P chromatin assembly or disassembly
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007049 P cell cycle
GO:0008168 F methyltransferase activity
GO:0008270 F zinc ion binding
GO:0016568 P chromatin organization
GO:0016740 F transferase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0030154 P cell differentiation
GO:0032259 P methylation
GO:0034968 P histone lysine methylation
GO:0046872 F metal ion binding
GO:0046974 F histone methyltransferase activity (H3-K9 specific)
GO:0051567 P histone H3-K9 methylation
GO:0071456 P cellular response to hypoxia
FPKM:0.00 TPM:0.00
1915 A_BomaASG_c12912_g1_i2
386bp
H3K9_methyltransferase-like_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000775 C chromosome, centromeric region
GO:0000785 C chromatin
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006333 P chromatin assembly or disassembly
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007049 P cell cycle
GO:0008168 F methyltransferase activity
GO:0008270 F zinc ion binding
GO:0016568 P chromatin organization
GO:0016740 F transferase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0030154 P cell differentiation
GO:0032259 P methylation
GO:0034968 P histone lysine methylation
GO:0046872 F metal ion binding
GO:0046974 F histone methyltransferase activity (H3-K9 specific)
GO:0051567 P histone H3-K9 methylation
GO:0071456 P cellular response to hypoxia
FPKM:1.41 TPM:1.11
1916 A_BomaASG_c12913_g1_i1
460bp
PREDICTED:_uncharacterized_protein_LOC106711875_[Papilio_machaon]
FPKM:4.47 TPM:3.49
1917 A_BomaASG_c12914_g1_i1
368bp
anaphase-promoting_complex_subunit_1-like_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005680 C anaphase-promoting complex
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0016567 P protein ubiquitination
GO:0051301 P cell division
GO:0070979 P protein K11-linked ubiquitination
FPKM:3.07 TPM:2.40
1918 A_BomaASG_c12916_g1_i1
227bp
FPKM:2.19 TPM:1.71
1919 A_BomaASG_c12917_g1_i1
331bp
FPKM:0.22 TPM:0.17
1920 A_BomaASG_c12917_g1_i2
439bp
FPKM:3.12 TPM:2.44
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