SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search Assembled RNA-Seq

previous next from show/60564
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1201 A_BomaASG_c11967_g1_i1
246bp
FPKM:0.59 TPM:0.46
1202 A_BomaASG_c11969_g1_i1
229bp
FPKM:4.27 TPM:3.34
1203 A_BomaASG_c1196_g1_i1
218bp
FPKM:0.00 TPM:0.00
1204 A_BomaASG_c11970_g1_i1
572bp
FPKM:1.57 TPM:1.23
1205 A_BomaASG_c11972_g1_i1
209bp
Mpv17_protein_2_[Danaus_plexippus_plexippus]
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:0.94 TPM:0.73
1206 A_BomaASG_c11973_g1_i1
390bp
NAD-dependent_protein_deacetylase_sirtuin-6_[Bombyx_mori]
FPKM:2.09 TPM:1.63
1207 A_BomaASG_c11974_g1_i1
583bp
FPKM:4.20 TPM:3.29
1208 A_BomaASG_c11975_g1_i1
511bp
midasin_isoform_X1_[Bombyx_mori]
GO:0000027 P ribosomal large subunit assembly
GO:0000166 F nucleotide binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006461 P protein-containing complex assembly
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016887 F ATP hydrolysis activity
GO:0045111 C intermediate filament cytoskeleton
GO:0051082 F unfolded protein binding
FPKM:2.76 TPM:2.16
1209 A_BomaASG_c11979_g1_i1
202bp
FPKM:0.00 TPM:0.00
1210 A_BomaASG_c1197_g1_i1
210bp
FPKM:6.46 TPM:5.05
1211 A_BomaASG_c11980_g1_i1
334bp
FPKM:1.82 TPM:1.43
1212 A_BomaASG_c11981_g1_i1
339bp
endothelin-converting_enzyme_homolog_isoform_X1_[Bombyx_mori]
FPKM:2.07 TPM:1.62
1213 A_BomaASG_c11984_g1_i1
220bp
FPKM:4.00 TPM:3.13
1214 A_BomaASG_c11985_g1_i1
246bp
FPKM:1.18 TPM:0.92
1215 A_BomaASG_c1198_g1_i1
286bp
uncharacterized_protein_LOC105842934_isoform_X8_[Bombyx_mori]
FPKM:0.41 TPM:0.32
1216 A_BomaASG_c1198_g2_i1
202bp
uncharacterized_protein_LOC105842934_isoform_X8_[Bombyx_mori]
FPKM:3.14 TPM:2.46
1217 A_BomaASG_c11990_g1_i1
228bp
FPKM:1.44 TPM:1.13
1218 A_BomaASG_c11991_g1_i1
452bp
FPKM:4.59 TPM:3.59
1219 A_BomaASG_c11992_g1_i1
267bp
FPKM:2.41 TPM:1.89
1220 A_BomaASG_c11993_g1_i1
252bp
FPKM:2.21 TPM:1.73
1221 A_BomaASG_c11995_g1_i1
287bp
FPKM:3.70 TPM:2.89
1222 A_BomaASG_c11996_g1_i1
204bp
FPKM:2.03 TPM:1.59
1223 A_BomaASG_c11997_g1_i1
311bp
FPKM:3.13 TPM:2.45
1224 A_BomaASG_c11999_g1_i1
209bp
FPKM:0.94 TPM:0.73
1225 A_BomaASG_c1199_g1_i1
288bp
mitochondrial_enolase_superfamily_member_1_[Bombyx_mori]
GO:0000287 F magnesium ion binding
GO:0003824 F catalytic activity
GO:0005575 C cellular_component
GO:0005739 C mitochondrion
GO:0008152 P metabolic process
GO:0009063 P cellular amino acid catabolic process
GO:0016829 F lyase activity
GO:0016853 F isomerase activity
GO:0044275 P cellular carbohydrate catabolic process
GO:0046872 F metal ion binding
GO:0050023 F L-fuconate dehydratase activity
FPKM:1.63 TPM:1.28
1226 A_BomaASG_c119_g1_i1
353bp
FPKM:2.75 TPM:2.15
1227 A_BomaASG_c12001_g1_i1
236bp
FPKM:2.62 TPM:2.05
1228 A_BomaASG_c12002_g1_i1
272bp
uncharacterized_protein_LOC101737203_isoform_X2_[Bombyx_mori]
FPKM:2.77 TPM:2.17
1229 A_BomaASG_c12003_g1_i1
292bp
ribosomal_protein_P2_[Bombyx_mori]
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006414 P translational elongation
GO:0030529 C ribonucleoprotein complex
FPKM:8.71 TPM:6.82
1230 A_BomaASG_c12006_g1_i1
301bp
FPKM:3.72 TPM:2.91
previous next from show/60564

- SilkBase 1999-2023 -