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Search Assembled RNA-Seq

No.

Name
Length

Chromosome No./Scaffold Id
Scaffold Length

BLAST (vs nr)

Gene ontology

Transcript
Level

1171

A_BomaASG_c11919_g1_i1

243bp

FPKM:1.82 TPM:1.42

1172

A_BomaASG_c11920_g1_i1

214bp

ATP-binding_cassette_sub-family_A_member_1_[Bombyx_mori]

GO:0000166	F	nucleotide binding
GO:0005215	F	transporter activity
GO:0005319	F	lipid transporter activity
GO:0005524	F	ATP binding
GO:0005615	C	extracellular space
GO:0005886	C	plasma membrane
GO:0006810	P	transport
GO:0006869	P	lipid transport
GO:0016020	C	membrane
GO:0016021	C	integral component of membrane
GO:0016887	F	ATP hydrolysis activity
GO:0042493	P	response to xenobiotic stimulus
GO:0042626	F	ATPase-coupled transmembrane transporter activity
GO:0044267	P	cellular protein metabolic process
GO:0051384	P	response to glucocorticoid
GO:0055085	P	transmembrane transport
GO:0097208	C	alveolar lamellar body
GO:0097232	C	lamellar body membrane
GO:0097233	C	alveolar lamellar body membrane

FPKM:1.74 TPM:1.36

1173

A_BomaASG_c11921_g1_i1

332bp

FPKM:19.97 TPM:15.63

1174

A_BomaASG_c11922_g1_i1

323bp

uncharacterized_protein_LOC101747185_[Bombyx_mori]

FPKM:1.94 TPM:1.52

1175

A_BomaASG_c11924_g1_i1

263bp

FPKM:1.00 TPM:0.78

1176

A_BomaASG_c11929_g1_i1

235bp

FPKM:1.99 TPM:1.56

1177

A_BomaASG_c11930_g1_i1

4006bp

LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101741849_[Bombyx_mori]

GO:0003676	F	nucleic acid binding
GO:0003723	F	RNA binding
GO:0005737	C	cytoplasm
GO:0006139	P	nucleobase-containing compound metabolic process
GO:0008408	F	3'-5' exonuclease activity
GO:0031047	P	gene silencing by RNA
GO:0034587	P	piRNA metabolic process
GO:0042803	F	protein homodimerization activity
GO:0043186	C	P granule
GO:0051321	P	meiotic cell cycle
GO:1990923	C	PET complex

FPKM:40.44 TPM:31.64

1178

A_BomaASG_c11931_g1_i1

606bp

F-box_only_protein_42_[Bombyx_mori]

FPKM:4.35 TPM:3.41

1179

A_BomaASG_c11933_g1_i1

558bp

PREDICTED:_uncharacterized_protein_LOC105254802,_partial_[Camponotus_floridanus]

FPKM:1.08 TPM:0.85

1180

A_BomaASG_c11934_g1_i1

498bp

FPKM:1.43 TPM:1.12

1181

A_BomaASG_c11935_g1_i1

384bp

FPKM:8.56 TPM:6.70

1182

A_BomaASG_c11936_g1_i1

318bp

PREDICTED:_GTPase-activating_protein_CdGAPr_isoform_X2_[Papilio_polytes]

GO:0003674	F	molecular_function
GO:0005096	F	GTPase activator activity
GO:0005575	C	cellular_component
GO:0005622	C	intracellular anatomical structure
GO:0007165	P	signal transduction
GO:0007266	P	Rho protein signal transduction
GO:0007275	P	multicellular organism development
GO:0031290	P	retinal ganglion cell axon guidance
GO:0043547	P	positive regulation of GTPase activity

FPKM:3.00 TPM:2.35

1183

A_BomaASG_c11938_g1_i1

489bp

LOW_QUALITY_PROTEIN:_protein_bark_beetle_[Bombyx_mori]

GO:0005044	F	scavenger receptor activity
GO:0005886	C	plasma membrane
GO:0005912	C	adherens junction
GO:0005918	C	septate junction
GO:0005923	C	bicellular tight junction
GO:0006898	P	receptor-mediated endocytosis
GO:0016020	C	membrane
GO:0016021	C	integral component of membrane
GO:0030054	C	cell junction
GO:0030246	F	carbohydrate binding
GO:0034976	P	response to endoplasmic reticulum stress
GO:0035002	P	liquid clearance, open tracheal system
GO:0035159	P	regulation of tube length, open tracheal system
GO:0045217	P	cell-cell junction maintenance
GO:0061689	C	tricellular tight junction
GO:0090557	P	establishment of endothelial intestinal barrier
GO:1904274	P	tricellular tight junction assembly