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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
91 A_BomoMSG_c10118_g1_i1
261bp
FPKM:6.98 TPM:3.63
92 A_BomoMSG_c1011_g1_i1
513bp
FPKM:3.80 TPM:1.97
93 A_BomoMSG_c10121_g1_i1
2421bp
 D-3-phosphoglycerate_dehydrogenase_[Bombyx_mori]
GO:0004617 F phosphoglycerate dehydrogenase activity
GO:0006564 P L-serine biosynthetic process
GO:0008152 P metabolic process
GO:0008652 P cellular amino acid biosynthetic process
GO:0016491 F oxidoreductase activity
GO:0016616 F oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0051287 F NAD binding
GO:0055114 P obsolete oxidation-reduction process
FPKM:260.92 TPM:135.74
94 A_BomoMSG_c10124_g1_i1
728bp
 uncharacterized_protein_LOC101738884_[Bombyx_mori]
FPKM:3.42 TPM:1.78
95 A_BomoMSG_c10125_g1_i1
388bp
 PREDICTED:_transient_receptor_potential_cation_channel_trpm-like_[Plutella_xylostella]
GO:0005216 F ion channel activity
GO:0005261 F cation channel activity
GO:0006810 P transport
GO:0006811 P ion transport
GO:0007005 P mitochondrion organization
GO:0010960 P magnesium ion homeostasis
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016049 P cell growth
GO:0034220 P ion transmembrane transport
GO:0034703 C cation channel complex
GO:0043052 P thermotaxis
GO:0046873 F metal ion transmembrane transporter activity
GO:0051262 P protein tetramerization
GO:0055069 P zinc ion homeostasis
GO:0055085 P transmembrane transport
GO:0070838 P metal ion transport
GO:0097682 F intracellular phosphatidylinositol-3,5-bisphosphate-sensitive cation channel activity
GO:0098655 P cation transmembrane transport
FPKM:1.76 TPM:0.92
96 A_BomoMSG_c10126_g1_i1
257bp
 PREDICTED:_uncharacterized_protein_K02A2.6-like_[Papilio_machaon]
GO:0003676 F nucleic acid binding
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0046872 F metal ion binding
FPKM:2.78 TPM:1.45
97 A_BomoMSG_c10127_g1_i1
262bp
FPKM:4.25 TPM:2.21
98 A_BomoMSG_c10127_g2_i1
247bp
FPKM:4.28 TPM:2.23
99 A_BomoMSG_c10129_g1_i1
766bp
 protein_TANC2_isoform_X4_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005886 C plasma membrane
GO:0007520 P myoblast fusion
GO:0008542 P visual learning
GO:0014069 C postsynaptic density
GO:0016020 C membrane
GO:0030054 C cell junction
GO:0030425 C dendrite
GO:0043025 C neuronal cell body
GO:0043679 C axon terminus
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
GO:0097062 P dendritic spine maintenance
FPKM:2.43 TPM:1.26
100 A_BomoMSG_c10130_g1_i1
755bp
 uncharacterized_protein_LOC101741203_[Bombyx_mori]
FPKM:49.99 TPM:26.01
101 A_BomoMSG_c10132_g1_i1
733bp
FPKM:3.90 TPM:2.03
102 A_BomoMSG_c10133_g1_i1
253bp
FPKM:11.54 TPM:6.01
103 A_BomoMSG_c10135_g1_i1
214bp
FPKM:0.90 TPM:0.47
104 A_BomoMSG_c10136_g1_i1
341bp
 uncharacterized_protein_LOC101742722_[Bombyx_mori]
FPKM:2.51 TPM:1.31
105 A_BomoMSG_c10137_g1_i1
1204bp
 Bax_inhibitor-1-like_protein_[Bombyx_mori]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006915 P apoptotic process
GO:0006986 P response to unfolded protein
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0043066 P negative regulation of apoptotic process
FPKM:317.46 TPM:165.15
106 A_BomoMSG_c10138_g1_i1
320bp
 uncharacterized_protein_LOC101746950_[Bombyx_mori]
FPKM:3.88 TPM:2.02
107 A_BomoMSG_c10139_g1_i1
204bp
 A_disintegrin_and_metalloproteinase_with_thrombospondin_motifs_like_precursor_[Bombyx_mori]
FPKM:4.15 TPM:2.16
108 A_BomoMSG_c1013_g1_i1
463bp
 probable_cation-transporting_ATPase_13A3_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005887 C integral component of plasma membrane
GO:0006812 P cation transport
GO:0006874 P cellular calcium ion homeostasis
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0019829 F ATPase-coupled cation transmembrane transporter activity
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
GO:0098655 P cation transmembrane transport
FPKM:0.00 TPM:0.00
109 A_BomoMSG_c1013_g1_i2
772bp
 probable_cation-transporting_ATPase_13A3_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005388 F P-type calcium transporter activity
GO:0005524 F ATP binding
GO:0005789 C endoplasmic reticulum membrane
GO:0005887 C integral component of plasma membrane
GO:0006812 P cation transport
GO:0006874 P cellular calcium ion homeostasis
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0019829 F ATPase-coupled cation transmembrane transporter activity
GO:0046872 F metal ion binding
GO:0070588 P calcium ion transmembrane transport
GO:0098655 P cation transmembrane transport
FPKM:3.56 TPM:1.85
110 A_BomoMSG_c10140_g1_i1
305bp
 NADPH-dependent_diflavin_oxidoreductase_1_isoform_X2_[Bombyx_mori]
GO:0003958 F NADPH-hemoprotein reductase activity
GO:0005506 F iron ion binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0008219 P cell death
GO:0010181 F FMN binding
GO:0016226 P iron-sulfur cluster assembly
GO:0016491 F oxidoreductase activity
GO:0016651 F oxidoreductase activity, acting on NAD(P)H
GO:0036245 P cellular response to menadione
GO:0045111 C intermediate filament cytoskeleton
GO:0048471 C perinuclear region of cytoplasm
GO:0050660 F flavin adenine dinucleotide binding
GO:0050661 F NADP binding
GO:0055114 P obsolete oxidation-reduction process
FPKM:6.18 TPM:3.22
111 A_BomoMSG_c10141_g1_i1
237bp
 DE-cadherin_isoform_X3_[Bombyx_mori]
FPKM:2.71 TPM:1.41
112 A_BomoMSG_c10144_g1_i1
274bp
FPKM:1.45 TPM:0.75
113 A_BomoMSG_c10145_g1_i1
5417bp
 ATP-dependent_RNA_helicase_dbp2_isoform_X1_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003712 F transcription coregulator activity
GO:0003713 F transcription coactivator activity
GO:0003723 F RNA binding
GO:0003724 F RNA helicase activity
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0009299 P mRNA transcription
GO:0010501 P RNA secondary structure unwinding
GO:0016020 C membrane
GO:0016049 P cell growth
GO:0016787 F hydrolase activity
GO:0016818 F hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
GO:0019899 F enzyme binding
GO:0030331 F estrogen receptor binding
GO:0030529 C ribonucleoprotein complex
GO:0033148 P positive regulation of intracellular estrogen receptor signaling pathway
GO:0036002 F pre-mRNA binding
GO:0043517 P positive regulation of DNA damage response, signal transduction by p53 class mediator
GO:0044822 F RNA binding
GO:0045069 P regulation of viral genome replication
GO:0045667 P regulation of osteoblast differentiation
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048306 F calcium-dependent protein binding
GO:0048511 P rhythmic process
GO:0050681 F androgen receptor binding
GO:0060765 P regulation of androgen receptor signaling pathway
GO:0070062 C extracellular exosome
GO:0071013 C catalytic step 2 spliceosome
GO:0072332 P intrinsic apoptotic signaling pathway by p53 class mediator
GO:2001014 P regulation of skeletal muscle cell differentiation
FPKM:165.74 TPM:86.22
114 A_BomoMSG_c10146_g1_i1
1318bp
 rotatin_isoform_X2_[Bombyx_mori]
FPKM:1.74 TPM:0.91
115 A_BomoMSG_c10147_g1_i1
392bp
FPKM:1.49 TPM:0.77
116 A_BomoMSG_c1014_g1_i1
368bp
 uncharacterized_protein_LOC101742841_isoform_X1_[Bombyx_mori]
FPKM:3.30 TPM:1.72
117 A_BomoMSG_c10150_g1_i1
702bp
 protein_vav_isoform_X2_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0005575 C cellular_component
GO:0005622 C intracellular anatomical structure
GO:0007015 P actin filament organization
GO:0007155 P cell adhesion
GO:0007391 P dorsal closure
GO:0007409 P axonogenesis
GO:0007411 P axon guidance
GO:0007417 P central nervous system development
GO:0007424 P open tracheal system development
GO:0007520 P myoblast fusion
GO:0008360 P regulation of cell shape
GO:0016477 P cell migration
GO:0030676 F guanyl-nucleotide exchange factor activity
GO:0031532 P actin cytoskeleton reorganization
GO:0035011 P melanotic encapsulation of foreign target
GO:0035023 P regulation of Rho protein signal transduction
GO:0035556 P intracellular signal transduction
GO:0046872 F metal ion binding
GO:0072499 P photoreceptor cell axon guidance
GO:0090630 P activation of GTPase activity
FPKM:1.41 TPM:0.73
118 A_BomoMSG_c10151_g1_i1
376bp
FPKM:2.92 TPM:1.52
119 A_BomoMSG_c10152_g1_i1
277bp
 hypothetical_protein_M513_10596_[Trichuris_suis]
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004523 F RNA-DNA hybrid ribonuclease activity
GO:0005622 C intracellular anatomical structure
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0019012 C virion component
GO:0030430 C host cell cytoplasm
GO:0042025 C host cell nucleus
GO:0046718 P viral entry into host cell
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0075713 P establishment of integrated proviral latency
GO:0075732 P viral penetration into host nucleus
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
FPKM:3.29 TPM:1.71
120 A_BomoMSG_c10153_g1_i1
286bp
 uncharacterized_protein_LOC105842714_[Bombyx_mori]
FPKM:2.64 TPM:1.37
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