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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
121 A_BomoMSG_c10154_g1_i1
423bp
 conventional_protein_kinase_C_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004697 F protein kinase C activity
GO:0005524 F ATP binding
GO:0005622 C intracellular anatomical structure
GO:0006468 P protein phosphorylation
GO:0008270 F zinc ion binding
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0035556 P intracellular signal transduction
GO:0046872 F metal ion binding
FPKM:1.54 TPM:0.80
122 A_BomoMSG_c10155_g1_i1
323bp
FPKM:1.04 TPM:0.54
123 A_BomoMSG_c10157_g1_i1
236bp
FPKM:0.69 TPM:0.36
124 A_BomoMSG_c10158_g1_i1
296bp
 uncharacterized_protein_LOC110378383_[Helicoverpa_armigera]
FPKM:0.82 TPM:0.43
125 A_BomoMSG_c10159_g1_i1
310bp
FPKM:2.62 TPM:1.36
126 A_BomoMSG_c1015_g1_i1
382bp
FPKM:2.58 TPM:1.34
127 A_BomoMSG_c10160_g1_i1
278bp
FPKM:3.27 TPM:1.70
128 A_BomoMSG_c10161_g1_i1
658bp
 high_mobility_group_protein_D_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005694 C chromosome
FPKM:56.12 TPM:29.20
129 A_BomoMSG_c10167_g1_i1
2133bp
 coatomer_protein_complex_subunit_delta_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0006890 P retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
GO:0008344 P adult locomotory behavior
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0021691 P cerebellar Purkinje cell layer maturation
GO:0030126 C COPI vesicle coat
GO:0030137 C COPI-coated vesicle
GO:0030663 C COPI-coated vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0043231 C intracellular membrane-bounded organelle
GO:0043473 P pigmentation
GO:0044822 F RNA binding
GO:0048193 P Golgi vesicle transport
FPKM:97.59 TPM:50.77
130 A_BomoMSG_c10168_g1_i1
319bp
FPKM:3.19 TPM:1.66
131 A_BomoMSG_c10169_g1_i1
387bp
FPKM:2.28 TPM:1.18
132 A_BomoMSG_c10171_g1_i1
709bp
 LOW_QUALITY_PROTEIN:_protein_bark_beetle_[Bombyx_mori]
GO:0005044 F scavenger receptor activity
GO:0005886 C plasma membrane
GO:0005912 C adherens junction
GO:0005918 C septate junction
GO:0005923 C bicellular tight junction
GO:0006898 P receptor-mediated endocytosis
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0030246 F carbohydrate binding
GO:0034976 P response to endoplasmic reticulum stress
GO:0035002 P liquid clearance, open tracheal system
GO:0035159 P regulation of tube length, open tracheal system
GO:0045217 P cell-cell junction maintenance
GO:0061689 C tricellular tight junction
GO:0090557 P establishment of endothelial intestinal barrier
GO:1904274 P tricellular tight junction assembly
FPKM:1.18 TPM:0.61
133 A_BomoMSG_c10173_g1_i1
240bp
FPKM:3.28 TPM:1.71
134 A_BomoMSG_c10174_g1_i1
385bp
FPKM:4.08 TPM:2.12
135 A_BomoMSG_c10175_g1_i1
994bp
 eIF-2-alpha_kinase_GCN2_isoform_X2_[Bombyx_mori]
GO:0000049 F tRNA binding
GO:0000166 F nucleotide binding
GO:0002230 P positive regulation of defense response to virus by host
GO:0002250 P adaptive immune response
GO:0002286 P T cell activation involved in immune response
GO:0002376 P immune system process
GO:0002821 P positive regulation of adaptive immune response
GO:0003723 F RNA binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004694 F eukaryotic translation initiation factor 2alpha kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0005844 C polysome
GO:0006417 P regulation of translation
GO:0006446 P regulation of translational initiation
GO:0006468 P protein phosphorylation
GO:0007049 P cell cycle
GO:0007050 P regulation of cell cycle
GO:0007399 P nervous system development
GO:0007612 P learning
GO:0007616 P long-term memory
GO:0009267 P cellular response to starvation
GO:0010628 P positive regulation of gene expression
GO:0010998 P regulation of translational initiation by eIF2 alpha phosphorylation
GO:0016032 P viral process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0017148 P negative regulation of translation
GO:0019081 P viral translation
GO:0022626 C cytosolic ribosome
GO:0030154 P cell differentiation
GO:0030968 P endoplasmic reticulum unfolded protein response
GO:0032057 P negative regulation of translational initiation in response to stress
GO:0032792 P negative regulation of CREB transcription factor activity
GO:0034198 P cellular response to amino acid starvation
GO:0034644 P cellular response to UV
GO:0034976 P response to endoplasmic reticulum stress
GO:0036492 P eiF2alpha phosphorylation in response to endoplasmic reticulum stress
GO:0039520 P induction by virus of host autophagy
GO:0043558 P regulation of translational initiation in response to stress
GO:0044828 P negative regulation by host of viral genome replication
GO:0045665 P negative regulation of neuron differentiation
GO:0045947 P negative regulation of translational initiation
GO:0046777 P protein autophosphorylation
GO:0051607 P defense response to virus
GO:0060259 P regulation of feeding behavior
GO:0060733 P GCN2-mediated signaling
GO:0070417 P cellular response to cold
GO:0071074 F eukaryotic initiation factor eIF2 binding
GO:0071264 P positive regulation of translational initiation in response to starvation
GO:1900273 P positive regulation of long-term synaptic potentiation
GO:1990138 P neuron projection extension
GO:1990253 P cellular response to leucine starvation
FPKM:2.70 TPM:1.40
136 A_BomoMSG_c10176_g1_i1
515bp
FPKM:6.89 TPM:3.59
137 A_BomoMSG_c10177_g1_i1
207bp
FPKM:2.97 TPM:1.55
138 A_BomoMSG_c10180_g1_i1
205bp
FPKM:2.04 TPM:1.06
139 A_BomoMSG_c10182_g1_i1
1385bp
 uncharacterized_protein_LOC101745471_isoform_X1_[Bombyx_mori]
FPKM:16.34 TPM:8.50
140 A_BomoMSG_c10183_g1_i1
2824bp
 probable_aconitate_hydratase,_mitochondrial_[Bombyx_mori]
GO:0003994 F aconitate hydratase activity
GO:0005506 F iron ion binding
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0006099 P tricarboxylic acid cycle
GO:0006101 P citrate metabolic process
GO:0008152 P metabolic process
GO:0016829 F lyase activity
GO:0043209 C myelin sheath
GO:0046872 F metal ion binding
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
FPKM:33.28 TPM:17.31
141 A_BomoMSG_c10184_g1_i1
1391bp
 peroxiredoxin-4_precursor_[Bombyx_mori]
GO:0004601 F peroxidase activity
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005783 C endoplasmic reticulum
GO:0005790 C smooth endoplasmic reticulum
GO:0005829 C cytosol
GO:0007283 P spermatogenesis
GO:0008584 P male gonad development
GO:0016209 F antioxidant activity
GO:0016491 F oxidoreductase activity
GO:0019471 P 4-hydroxyproline metabolic process
GO:0022417 P protein maturation by protein folding
GO:0030198 P extracellular matrix organization
GO:0042803 F protein homodimerization activity
GO:0045454 P cell redox homeostasis
GO:0051920 F peroxiredoxin activity
GO:0055114 P obsolete oxidation-reduction process
GO:0070062 C extracellular exosome
GO:0072593 P reactive oxygen species metabolic process
GO:0098869 P cellular oxidant detoxification
GO:2000255 P negative regulation of male germ cell proliferation
FPKM:65.47 TPM:34.06
142 A_BomoMSG_c10185_g1_i1
225bp
FPKM:5.45 TPM:2.83
143 A_BomoMSG_c10186_g1_i1
447bp
FPKM:4.83 TPM:2.51
144 A_BomoMSG_c10187_g1_i1
261bp
 SH3_domain-containing_kinase-binding_protein_1_isoform_X3_[Bombyx_mori]
FPKM:4.30 TPM:2.23
145 A_BomoMSG_c10189_g1_i1
587bp
FPKM:2.74 TPM:1.43
146 A_BomoMSG_c1018_g1_i1
213bp
FPKM:0.91 TPM:0.47
147 A_BomoMSG_c10190_g1_i1
580bp
 uncharacterized_protein_LOC101744677_[Bombyx_mori]
FPKM:24.94 TPM:12.97
148 A_BomoMSG_c10192_g1_i1
401bp
 hypoxia_up-regulated_protein_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001666 P response to hypoxia
GO:0005524 F ATP binding
GO:0005783 C endoplasmic reticulum
GO:0005788 C endoplasmic reticulum lumen
GO:0005790 C smooth endoplasmic reticulum
GO:1903298 P negative regulation of hypoxia-induced intrinsic apoptotic signaling pathway
FPKM:6.32 TPM:3.29
149 A_BomoMSG_c10192_g1_i2
1209bp
 hypoxia_up-regulated_protein_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005783 C endoplasmic reticulum
GO:0005788 C endoplasmic reticulum lumen
FPKM:69.52 TPM:36.16
150 A_BomoMSG_c10193_g1_i1
476bp
FPKM:2.76 TPM:1.43
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