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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
781 A_BomoMSG_c10840_g1_i1
766bp
 uncharacterized_protein_LOC105841473_[Bombyx_mori]
FPKM:3.01 TPM:1.57
782 A_BomoMSG_c10842_g1_i1
409bp
 Type_I_inositol-1,4,5-trisphosphate_5-phosphatase_[Operophtera_brumata]
GO:0004445 F inositol-polyphosphate 5-phosphatase activity
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0042731 F PH domain binding
GO:0043647 P inositol phosphate metabolic process
GO:0046856 P phosphatidylinositol dephosphorylation
GO:0052658 F inositol-1,4,5-trisphosphate 5-phosphatase activity
GO:0052659 F inositol-1,3,4,5-tetrakisphosphate 5-phosphatase activity
GO:0070062 C extracellular exosome
FPKM:3.70 TPM:1.93
783 A_BomoMSG_c10843_g1_i1
461bp
FPKM:0.00 TPM:0.00
784 A_BomoMSG_c10843_g1_i2
547bp
FPKM:2.11 TPM:1.10
785 A_BomoMSG_c10844_g1_i1
213bp
 polyhomeotic_isoform_X10_[Bombyx_mori]
FPKM:3.64 TPM:1.89
786 A_BomoMSG_c10844_g2_i1
267bp
 polyhomeotic_isoform_X10_[Bombyx_mori]
FPKM:2.04 TPM:1.06
787 A_BomoMSG_c10845_g1_i1
210bp
FPKM:4.74 TPM:2.47
788 A_BomoMSG_c10847_g1_i1
368bp
 PREDICTED:_ATP-dependent_DNA_helicase_pif1-like_[Acyrthosiphon_pisum]
GO:0000166 F nucleotide binding
GO:0000723 P telomere maintenance
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0016787 F hydrolase activity
GO:0032508 P DNA duplex unwinding
FPKM:5.22 TPM:2.72
789 A_BomoMSG_c10852_g1_i1
368bp
FPKM:0.82 TPM:0.43
790 A_BomoMSG_c10852_g2_i1
203bp
FPKM:2.11 TPM:1.10
791 A_BomoMSG_c10854_g1_i1
367bp
FPKM:2.21 TPM:1.15
792 A_BomoMSG_c10855_g1_i1
619bp
FPKM:3.19 TPM:1.66
793 A_BomoMSG_c10856_g1_i1
980bp
 LOW_QUALITY_PROTEIN:_cytokine_receptor_[Bombyx_mori]
FPKM:4.62 TPM:2.40
794 A_BomoMSG_c10857_g1_i1
308bp
FPKM:4.17 TPM:2.17
795 A_BomoMSG_c10858_g1_i1
417bp
 reverse_transcriptase,_partial_[Scopula_ornata]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
FPKM:1.57 TPM:0.82
796 A_BomoMSG_c10859_g1_i1
603bp
 LOW_QUALITY_PROTEIN:_spectrin_beta_chain,_non-erythrocytic_2_[Bombyx_mori]
GO:0003779 F actin binding
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005516 F calmodulin binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005938 C cell cortex
GO:0008091 C spectrin
GO:0019905 F syntaxin binding
GO:0030507 F spectrin binding
GO:0031532 P actin cytoskeleton reorganization
GO:0032403 F protein-containing complex binding
GO:0043234 C protein-containing complex
GO:0046872 F metal ion binding
GO:0047485 F protein N-terminus binding
GO:0051693 P actin filament capping
FPKM:2.12 TPM:1.10
797 A_BomoMSG_c10859_g2_i1
411bp
 LOW_QUALITY_PROTEIN:_spectrin_beta_chain,_non-erythrocytic_2_[Bombyx_mori]
GO:0002168 P instar larval development
GO:0003779 F actin binding
GO:0005509 F calcium ion binding
GO:0005516 F calmodulin binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005811 C lipid droplet
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005938 C cell cortex
GO:0007009 P plasma membrane organization
GO:0007026 P negative regulation of microtubule depolymerization
GO:0007274 P neuromuscular synaptic transmission
GO:0007293 P germarium-derived egg chamber formation
GO:0007294 P germarium-derived oocyte fate determination
GO:0007308 P oocyte construction
GO:0007417 P central nervous system development
GO:0008017 F microtubule binding
GO:0008091 C spectrin
GO:0008092 F cytoskeletal protein binding
GO:0008302 P female germline ring canal formation, actin assembly
GO:0008360 P regulation of cell shape
GO:0016199 P axon midline choice point recognition
GO:0016323 C basolateral plasma membrane
GO:0016337 P cell-cell adhesion
GO:0030707 P ovarian follicle cell development
GO:0030721 P spectrosome organization
GO:0030727 P germarium-derived female germ-line cyst formation
GO:0031594 C neuromuscular junction
GO:0042062 P long-term strengthening of neuromuscular junction
GO:0045169 C fusome
GO:0045170 C spectrosome
GO:0045478 P fusome organization
GO:0046872 F metal ion binding
GO:0048134 P germ-line cyst formation
GO:0048790 P maintenance of presynaptic active zone structure
GO:0050807 P regulation of synapse organization
GO:0051693 P actin filament capping
GO:0060429 P epithelium development
FPKM:1.84 TPM:0.96
798 A_BomoMSG_c10861_g1_i1
1272bp
 C-Maf-inducing_protein_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0008150 P biological_process
FPKM:2.29 TPM:1.19
799 A_BomoMSG_c10862_g1_i1
674bp
FPKM:1.94 TPM:1.01
800 A_BomoMSG_c10863_g1_i1
701bp
FPKM:4.02 TPM:2.09
801 A_BomoMSG_c10867_g1_i1
256bp
 PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_[Austrofundulus_limnaeus]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
FPKM:3.37 TPM:1.75
802 A_BomoMSG_c10867_g1_i2
239bp
 PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_[Acropora_digitifera]
FPKM:1.33 TPM:0.69
803 A_BomoMSG_c1086_g1_i1
261bp
FPKM:1.61 TPM:0.84
804 A_BomoMSG_c10870_g1_i1
291bp
FPKM:2.97 TPM:1.55
805 A_BomoMSG_c10874_g1_i1
500bp
FPKM:1.54 TPM:0.80
806 A_BomoMSG_c10875_g1_i1
213bp
FPKM:8.18 TPM:4.26
807 A_BomoMSG_c10876_g1_i1
576bp
 AMP-activated_protein_kinase_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003682 F chromatin binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004679 F AMP-activated protein kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006468 P protein phosphorylation
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006633 P fatty acid biosynthetic process
GO:0006694 P steroid biosynthetic process
GO:0006695 P cholesterol biosynthetic process
GO:0006914 P autophagy
GO:0008202 P steroid metabolic process
GO:0008203 P cholesterol metabolic process
GO:0008610 P lipid biosynthetic process
GO:0010508 P positive regulation of autophagy
GO:0016055 P Wnt signaling pathway
GO:0016126 P sterol biosynthetic process
GO:0016241 P regulation of macroautophagy
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016568 P chromatin organization
GO:0016740 F transferase activity
GO:0031669 P cellular response to nutrient levels
GO:0032007 P negative regulation of TOR signaling
GO:0035174 F histone serine kinase activity
GO:0035404 P histone-serine phosphorylation
GO:0042149 P cellular response to glucose starvation
GO:0042593 P glucose homeostasis
GO:0042752 P regulation of circadian rhythm
GO:0043066 P negative regulation of apoptotic process
GO:0045821 P positive regulation of glycolytic process
GO:0046872 F metal ion binding
GO:0047322 F [hydroxymethylglutaryl-CoA reductase (NADPH)] kinase activity
GO:0048511 P rhythmic process
GO:0050405 F [acetyl-CoA carboxylase] kinase activity
GO:0055089 P fatty acid homeostasis
GO:2000505 P energy homeostasis
FPKM:5.06 TPM:2.63
808 A_BomoMSG_c10877_g1_i1
396bp
FPKM:3.65 TPM:1.90
809 A_BomoMSG_c10878_g1_i1
1775bp
 4-coumarate--CoA_ligase_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0004497 F monooxygenase activity
GO:0005524 F ATP binding
GO:0005777 C peroxisome
GO:0008152 P metabolic process
GO:0008218 P bioluminescence
GO:0016491 F oxidoreductase activity
GO:0046872 F metal ion binding
GO:0047077 F Photinus-luciferin 4-monooxygenase (ATP-hydrolyzing) activity
GO:0055114 P obsolete oxidation-reduction process
FPKM:34.38 TPM:17.89
810 A_BomoMSG_c10881_g1_i1
315bp
FPKM:2.54 TPM:1.32
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