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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
811 A_BomoMSG_c10882_g1_i1
351bp
 coiled-coil_domain-containing_protein_CG32809_isoform_X15_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
FPKM:4.18 TPM:2.17
812 A_BomoMSG_c10883_g1_i1
338bp
 insulin_receptor_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004714 F transmembrane receptor protein tyrosine kinase activity
GO:0005009 F insulin-activated receptor activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006468 P protein phosphorylation
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0007275 P multicellular organism development
GO:0008286 P insulin receptor signaling pathway
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0042169 F SH2 domain binding
GO:0043548 F phosphatidylinositol 3-kinase binding
GO:0043559 F insulin binding
GO:0043560 F insulin receptor substrate binding
GO:0046777 P protein autophosphorylation
GO:0051290 P protein heterotetramerization
GO:0051425 F PTB domain binding
FPKM:2.87 TPM:1.49
813 A_BomoMSG_c10885_g1_i1
381bp
 androgen-dependent_TFPI-regulating_protein-like_[Bombyx_mori]
GO:0005515 F protein binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:3.11 TPM:1.62
814 A_BomoMSG_c10887_g1_i1
201bp
 zinc_finger_protein_233_isoform_X3_[Bombyx_mori]
FPKM:3.26 TPM:1.70
815 A_BomoMSG_c10888_g1_i1
504bp
FPKM:2.20 TPM:1.14
816 A_BomoMSG_c10889_g1_i1
1051bp
 peroxisome_biogenesis_factor_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005777 C peroxisome
GO:0005778 C peroxisomal membrane
GO:0005829 C cytosol
GO:0006625 P protein targeting to peroxisome
GO:0006810 P transport
GO:0007031 P peroxisome organization
GO:0008022 F protein C-terminus binding
GO:0008152 P metabolic process
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016558 P protein import into peroxisome matrix
GO:0032403 F protein-containing complex binding
GO:0042623 F ATP hydrolysis activity
GO:0043231 C intracellular membrane-bounded organelle
GO:0060152 P microtubule-based peroxisome localization
GO:0070062 C extracellular exosome
FPKM:3.19 TPM:1.66
817 A_BomoMSG_c10890_g1_i1
482bp
 nuclear_factor_related_to_kappa-B-binding_protein_isoform_X3_[Bombyx_mori]
FPKM:2.53 TPM:1.31
818 A_BomoMSG_c10892_g1_i1
547bp
FPKM:2.41 TPM:1.26
819 A_BomoMSG_c10893_g1_i1
303bp
FPKM:3.13 TPM:1.63
820 A_BomoMSG_c10894_g1_i1
865bp
 uncharacterized_protein_LOC101741453_[Bombyx_mori]
FPKM:17.92 TPM:9.32
821 A_BomoMSG_c10894_g1_i2
618bp
 uncharacterized_protein_LOC101741453_[Bombyx_mori]
FPKM:41.34 TPM:21.51
822 A_BomoMSG_c10895_g1_i1
212bp
FPKM:3.69 TPM:1.92
823 A_BomoMSG_c10896_g1_i1
802bp
FPKM:2.66 TPM:1.39
824 A_BomoMSG_c10898_g1_i1
493bp
FPKM:7.86 TPM:4.09
825 A_BomoMSG_c108_g1_i1
463bp
FPKM:4.79 TPM:2.49
826 A_BomoMSG_c10900_g1_i1
230bp
FPKM:5.86 TPM:3.05
827 A_BomoMSG_c10902_g1_i1
304bp
 FGGY_carbohydrate_kinase_domain-containing_protein_isoform_X1_[Bombyx_mori]
GO:0005975 P carbohydrate metabolic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
FPKM:9.34 TPM:4.86
828 A_BomoMSG_c10903_g1_i1
479bp
FPKM:2.91 TPM:1.52
829 A_BomoMSG_c10904_g1_i1
253bp
FPKM:5.19 TPM:2.70
830 A_BomoMSG_c10907_g1_i1
301bp
 Histone-lysine_N-methyltransferase_SETMAR,_partial_[Acromyrmex_echinatior]
FPKM:2.78 TPM:1.44
831 A_BomoMSG_c10908_g1_i1
291bp
 polyhomeotic_[Bombyx_mori]
GO:0000070 P mitotic sister chromatid segregation
GO:0001047 F core promoter sequence-specific DNA binding
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006342 P heterochromatin assembly
GO:0007275 P multicellular organism development
GO:0008270 F zinc ion binding
GO:0016458 P obsolete gene silencing
GO:0021954 P central nervous system neuron development
GO:0030708 P germarium-derived female germ-line cyst encapsulation
GO:0030713 P ovarian follicle cell stalk formation
GO:0035075 P response to ecdysone
GO:0035102 C PRC1 complex
GO:0035186 P syncytial blastoderm mitotic cell cycle
GO:0044547 F DNA topoisomerase binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0051087 F chaperone binding
FPKM:2.46 TPM:1.28
832 A_BomoMSG_c10908_g1_i2
462bp
 polyhomeotic_[Bombyx_mori]
GO:0000070 P mitotic sister chromatid segregation
GO:0001047 F core promoter sequence-specific DNA binding
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006342 P heterochromatin assembly
GO:0007275 P multicellular organism development
GO:0008270 F zinc ion binding
GO:0016458 P obsolete gene silencing
GO:0021954 P central nervous system neuron development
GO:0030708 P germarium-derived female germ-line cyst encapsulation
GO:0030713 P ovarian follicle cell stalk formation
GO:0035075 P response to ecdysone
GO:0035102 C PRC1 complex
GO:0035186 P syncytial blastoderm mitotic cell cycle
GO:0044547 F DNA topoisomerase binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0051087 F chaperone binding
FPKM:1.19 TPM:0.62
833 A_BomoMSG_c10909_g1_i1
919bp
 programmed_cell_death_protein_5-like_protein_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006915 P apoptotic process
GO:0008201 F heparin binding
GO:0008285 P negative regulation of cell population proliferation
GO:0010628 P positive regulation of gene expression
GO:0010698 F acetyltransferase activator activity
GO:0043065 P positive regulation of apoptotic process
GO:0043280 P positive regulation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0048487 F beta-tubulin binding
GO:0070062 C extracellular exosome
GO:0071560 P cellular response to transforming growth factor beta stimulus
GO:0090200 P positive regulation of release of cytochrome c from mitochondria
GO:1903638 P positive regulation of protein insertion into mitochondrial outer membrane
GO:1903645 P negative regulation of chaperone-mediated protein folding
FPKM:45.79 TPM:23.82
834 A_BomoMSG_c1090_g1_i1
386bp
 protein_Spindly_[Bombyx_mori]
FPKM:2.79 TPM:1.45
835 A_BomoMSG_c10910_g1_i1
278bp
 Yokozuna_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0004190 F aspartic-type endopeptidase activity
GO:0005524 F ATP binding
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
FPKM:4.67 TPM:2.43
836 A_BomoMSG_c10911_g1_i1
241bp
FPKM:4.55 TPM:2.37
837 A_BomoMSG_c10916_g1_i1
388bp
FPKM:3.78 TPM:1.97
838 A_BomoMSG_c10917_g1_i1
211bp
 erythroid_differentiation-related_factor_1_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
FPKM:11.22 TPM:5.84
839 A_BomoMSG_c10918_g1_i1
291bp
 uncharacterized_protein_LOC101743404_isoform_X2_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006325 P chromatin organization
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007526 P larval somatic muscle development
GO:0008270 F zinc ion binding
GO:0016491 F oxidoreductase activity
GO:0016568 P chromatin organization
GO:0016577 P histone demethylation
GO:0016706 F 2-oxoglutarate-dependent dioxygenase activity
GO:0032453 F histone H3-methyl-lysine-4 demethylase activity
GO:0032922 P circadian regulation of gene expression
GO:0034647 F histone H3-tri/di/monomethyl-lysine-4 demethylase activity
GO:0034720 P histone H3-K4 demethylation
GO:0034721 P histone H3-K4 demethylation, trimethyl-H3-K4-specific
GO:0043970 P histone H3-K9 acetylation
GO:0043992 F histone acetyltransferase activity (H3-K9 specific)
GO:0045475 P locomotor rhythm
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0048511 P rhythmic process
GO:0051213 F dioxygenase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0070822 C Sin3-type complex
FPKM:3.40 TPM:1.77
840 A_BomoMSG_c10919_g1_i1
322bp
FPKM:2.79 TPM:1.45
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