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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
751 A_BomoMSG_c10809_g1_i2
977bp
 glutathione_peroxidase_[Bombyx_mori]
GO:0004601 F peroxidase activity
GO:0004602 F glutathione peroxidase activity
GO:0005737 C cytoplasm
GO:0006979 P response to oxidative stress
GO:0016491 F oxidoreductase activity
GO:0047066 F phospholipid-hydroperoxide glutathione peroxidase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0098869 P cellular oxidant detoxification
FPKM:20.50 TPM:10.66
752 A_BomoMSG_c10810_g1_i1
258bp
FPKM:6.62 TPM:3.44
753 A_BomoMSG_c10812_g1_i1
395bp
FPKM:3.91 TPM:2.04
754 A_BomoMSG_c10814_g1_i1
470bp
 uncharacterized_protein_LOC101738540_[Bombyx_mori]
FPKM:2.25 TPM:1.17
755 A_BomoMSG_c10816_g1_i1
224bp
 uncharacterized_protein_LOC101735649_[Bombyx_mori]
FPKM:0.00 TPM:0.00
756 A_BomoMSG_c10816_g1_i2
621bp
 uncharacterized_protein_LOC101735649_[Bombyx_mori]
FPKM:1.91 TPM:0.99
757 A_BomoMSG_c10817_g1_i1
337bp
FPKM:1.92 TPM:1.00
758 A_BomoMSG_c10819_g1_i1
264bp
FPKM:8.37 TPM:4.35
759 A_BomoMSG_c10820_g1_i1
270bp
FPKM:4.48 TPM:2.33
760 A_BomoMSG_c10822_g1_i1
202bp
 survivin-1_isoform_X1_[Bombyx_mori]
FPKM:4.03 TPM:2.10
761 A_BomoMSG_c10822_g1_i2
257bp
 survivin-1_[Bombyx_mori]
FPKM:1.25 TPM:0.65
762 A_BomoMSG_c10824_g1_i1
320bp
 alkaline_nuclease_isoform_X1_[Bombyx_mori]
FPKM:3.53 TPM:1.83
763 A_BomoMSG_c10825_g1_i1
625bp
 unnamed_protein_product,_partial_[Oncorhynchus_mykiss]
FPKM:2.65 TPM:1.38
764 A_BomoMSG_c10826_g1_i1
1042bp
 E3_ubiquitin-protein_ligase_listerin_[Bombyx_mori]
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
FPKM:2.94 TPM:1.53
765 A_BomoMSG_c10826_g1_i2
964bp
 E3_ubiquitin-protein_ligase_listerin_[Bombyx_mori]
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
FPKM:2.59 TPM:1.35
766 A_BomoMSG_c10827_g1_i1
345bp
hypothetical_protein_ALO55_04108_[Pseudomonas_savastanoi_pv._phaseolicola]
FPKM:1.23 TPM:0.64
767 A_BomoMSG_c10827_g2_i1
461bp
hypothetical_protein_[uncultured_bacterium]
FPKM:1.73 TPM:0.90
768 A_BomoMSG_c10828_g1_i1
593bp
FPKM:3.25 TPM:1.69
769 A_BomoMSG_c10829_g1_i1
688bp
FPKM:2.12 TPM:1.10
770 A_BomoMSG_c1082_g1_i1
240bp
 LOW_QUALITY_PROTEIN:_E3_ubiquitin-protein_ligase_UBR1_[Bombyx_mori]
GO:0000151 C ubiquitin ligase complex
GO:0005737 C cytoplasm
GO:0006368 P transcription elongation from RNA polymerase II promoter
GO:0008023 C transcription elongation factor complex
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030163 P protein catabolic process
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
GO:0071596 P ubiquitin-dependent protein catabolic process via the N-end rule pathway
FPKM:0.66 TPM:0.34
771 A_BomoMSG_c1082_g1_i2
217bp
 LOW_QUALITY_PROTEIN:_E3_ubiquitin-protein_ligase_UBR1_[Bombyx_mori]
GO:0000151 C ubiquitin ligase complex
GO:0005737 C cytoplasm
GO:0006368 P transcription elongation from RNA polymerase II promoter
GO:0008023 C transcription elongation factor complex
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030163 P protein catabolic process
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
GO:0071596 P ubiquitin-dependent protein catabolic process via the N-end rule pathway
FPKM:4.31 TPM:2.24
772 A_BomoMSG_c10830_g1_i1
256bp
FPKM:5.05 TPM:2.63
773 A_BomoMSG_c10830_g2_i1
395bp
FPKM:3.43 TPM:1.78
774 A_BomoMSG_c10831_g1_i1
395bp
FPKM:2.45 TPM:1.27
775 A_BomoMSG_c10835_g1_i1
263bp
FPKM:4.22 TPM:2.20
776 A_BomoMSG_c10836_g1_i1
1689bp
 phosphoinositide_3-kinase_regulatory_subunit_4_isoform_X3_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005643 C nuclear pore
GO:0005768 C endosome
GO:0005770 C late endosome
GO:0005776 C autophagosome
GO:0005829 C cytosol
GO:0005930 C axoneme
GO:0006468 P protein phosphorylation
GO:0006623 P protein targeting to vacuole
GO:0006661 P phosphatidylinositol biosynthetic process
GO:0016020 C membrane
GO:0016236 P macroautophagy
GO:0016301 F kinase activity
GO:0016303 F 1-phosphatidylinositol-3-kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0030242 P autophagy of peroxisome
GO:0030670 C phagocytic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0032465 P regulation of cytokinesis
GO:0032801 P receptor catabolic process
GO:0034162 P toll-like receptor 9 signaling pathway
GO:0034271 C phosphatidylinositol 3-kinase complex, class III, type I
GO:0034272 C phosphatidylinositol 3-kinase complex, class III, type II
GO:0035032 C phosphatidylinositol 3-kinase complex, class III
GO:0036092 P phosphatidylinositol-3-phosphate biosynthetic process
GO:0042149 P cellular response to glucose starvation
GO:0043552 P positive regulation of phosphatidylinositol 3-kinase activity
GO:0045324 P late endosome to vacuole transport
GO:0071561 C nucleus-vacuole junction
FPKM:1.91 TPM:0.99
777 A_BomoMSG_c10837_g1_i1
248bp
 zinc_finger_protein_704_[Bombyx_mori]
FPKM:1.21 TPM:0.63
778 A_BomoMSG_c10838_g1_i1
501bp
FPKM:5.80 TPM:3.02
779 A_BomoMSG_c10839_g1_i1
262bp
FPKM:4.26 TPM:2.22
780 A_BomoMSG_c1083_g1_i1
266bp
FPKM:2.06 TPM:1.07
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