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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
691 A_BomoMSG_c10755_g1_i1
266bp
 A-kinase_anchor_protein_10,_mitochondrial_isoform_X2_[Bombyx_mori]
FPKM:3.60 TPM:1.87
692 A_BomoMSG_c10756_g1_i1
201bp
 uncharacterized_protein_LOC101742281_isoform_X1_[Bombyx_mori]
FPKM:3.26 TPM:1.70
693 A_BomoMSG_c10759_g1_i1
401bp
FPKM:1.19 TPM:0.62
694 A_BomoMSG_c1075_g1_i1
768bp
FPKM:1.16 TPM:0.60
695 A_BomoMSG_c10760_g1_i1
243bp
FPKM:5.09 TPM:2.65
696 A_BomoMSG_c10761_g1_i1
545bp
FPKM:4.85 TPM:2.52
697 A_BomoMSG_c10762_g1_i1
325bp
FPKM:6.17 TPM:3.21
698 A_BomoMSG_c10763_g1_i1
246bp
FPKM:0.00 TPM:0.00
699 A_BomoMSG_c10763_g1_i2
494bp
FPKM:3.48 TPM:1.81
700 A_BomoMSG_c10763_g1_i3
319bp
FPKM:0.00 TPM:0.00
701 A_BomoMSG_c10764_g1_i1
1953bp
 PREDICTED:_serine/threonine-protein_phosphatase_PP1-beta_catalytic_subunit_[Papilio_polytes]
GO:0004721 F phosphoprotein phosphatase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005975 P carbohydrate metabolic process
GO:0005977 P glycogen metabolic process
GO:0006470 P protein dephosphorylation
GO:0007049 P cell cycle
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0030155 P regulation of cell adhesion
GO:0046872 F metal ion binding
GO:0050115 F myosin-light-chain-phosphatase activity
GO:0051301 P cell division
GO:0072357 C PTW/PP1 phosphatase complex
FPKM:66.57 TPM:34.63
702 A_BomoMSG_c10766_g1_i1
249bp
FPKM:3.00 TPM:1.56
703 A_BomoMSG_c10766_g2_i1
211bp
FPKM:0.00 TPM:0.00
704 A_BomoMSG_c10769_g1_i1
234bp
FPKM:9.11 TPM:4.74
705 A_BomoMSG_c1076_g1_i1
792bp
FPKM:1.95 TPM:1.02
706 A_BomoMSG_c1076_g1_i2
703bp
FPKM:0.22 TPM:0.12
707 A_BomoMSG_c10771_g1_i1
255bp
 C-myc_promoter-binding_protein_isoform_X1_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0017112 F guanyl-nucleotide exchange factor activity
GO:0043547 P positive regulation of GTPase activity
FPKM:2.27 TPM:1.18
708 A_BomoMSG_c10772_g1_i1
380bp
 vacuolar_protein_sorting-associated_protein_13D_[Bombyx_mori]
FPKM:1.94 TPM:1.01
709 A_BomoMSG_c10772_g1_i2
306bp
 vacuolar_protein_sorting-associated_protein_13D_[Bombyx_mori]
FPKM:3.28 TPM:1.71
710 A_BomoMSG_c10773_g1_i1
266bp
FPKM:1.03 TPM:0.54
711 A_BomoMSG_c10774_g1_i1
281bp
 Kinesin-like_protein_b,_partial_[Operophtera_brumata]
FPKM:4.11 TPM:2.14
712 A_BomoMSG_c10777_g1_i1
343bp
 oviduct-specific_glycoprotein_[Bombyx_mori]
FPKM:2.80 TPM:1.45
713 A_BomoMSG_c10778_g1_i1
317bp
FPKM:2.15 TPM:1.12
714 A_BomoMSG_c10778_g2_i1
285bp
FPKM:0.44 TPM:0.23
715 A_BomoMSG_c10779_g1_i1
214bp
 kinase_suppressor_of_Ras_2_isoform_X1_[Bombyx_mori]
FPKM:0.90 TPM:0.47
716 A_BomoMSG_c10781_g1_i1
205bp
FPKM:1.02 TPM:0.53
717 A_BomoMSG_c10782_g1_i1
413bp
 nesprin-1_isoform_X1_[Bombyx_mori]
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005521 F lamin binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005640 C nuclear outer membrane
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0006997 P nucleus organization
GO:0007030 P Golgi organization
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030017 C sarcomere
GO:0031965 C nuclear membrane
GO:0034993 C meiotic nuclear membrane microtubule tethering complex
GO:0040023 P nuclear migration
GO:0042692 P muscle cell differentiation
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0044822 F RNA binding
GO:0045211 C postsynaptic membrane
GO:0051015 F actin filament binding
GO:0090286 P obsolete cytoskeletal anchoring at nuclear membrane
GO:0090292 P nuclear matrix anchoring at nuclear membrane
FPKM:1.82 TPM:0.95
718 A_BomoMSG_c10783_g1_i1
352bp
FPKM:11.87 TPM:6.18
719 A_BomoMSG_c10784_g1_i1
439bp
 U6_snRNA-associated_Sm-like_protein_LSm8_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0030529 C ribonucleoprotein complex
GO:0044822 F RNA binding
FPKM:33.95 TPM:17.66
720 A_BomoMSG_c10784_g1_i2
362bp
 U6_snRNA-associated_Sm-like_protein_LSm8_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0030529 C ribonucleoprotein complex
GO:0044822 F RNA binding
FPKM:5.45 TPM:2.84
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