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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
4321 A_BomoMSG_c14626_g1_i1
276bp
FPKM:6.64 TPM:3.45
4322 A_BomoMSG_c14627_g1_i1
289bp
 LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101740145_[Bombyx_mori]
FPKM:2.15 TPM:1.12
4323 A_BomoMSG_c14629_g1_i1
364bp
 required_for_meiotic_nuclear_division_protein_1_homolog_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0006412 P translation
GO:0070131 P positive regulation of mitochondrial translation
FPKM:4.76 TPM:2.48
4324 A_BomoMSG_c14630_g1_i1
208bp
FPKM:0.00 TPM:0.00
4325 A_BomoMSG_c14636_g1_i1
734bp
 translation_initiation_factor_1a_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0003723 F RNA binding
GO:0003743 F translation initiation factor activity
GO:0005575 C cellular_component
GO:0006413 P translational initiation
GO:0008150 P biological_process
FPKM:1.95 TPM:1.01
4326 A_BomoMSG_c14638_g1_i1
306bp
FPKM:8.07 TPM:4.20
4327 A_BomoMSG_c14639_g1_i1
207bp
FPKM:4.96 TPM:2.58
4328 A_BomoMSG_c1463_g1_i1
399bp
FPKM:2.17 TPM:1.13
4329 A_BomoMSG_c14642_g1_i1
411bp
FPKM:7.35 TPM:3.82
4330 A_BomoMSG_c14644_g1_i1
275bp
FPKM:0.49 TPM:0.26
4331 A_BomoMSG_c14644_g1_i2
395bp
FPKM:0.73 TPM:0.38
4332 A_BomoMSG_c14645_g1_i1
341bp
 DNA_repair_protein_REV1_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003684 F damaged DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0009411 P response to UV
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0017125 F deoxycytidyl transferase activity
GO:0019985 P translesion synthesis
GO:0042276 P error-prone translesion synthesis
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
FPKM:1.57 TPM:0.82
4333 A_BomoMSG_c14646_g1_i1
284bp
 Vacuolar_protein_sorting-associated_protein_13D_[Papilio_xuthus]
GO:0005622 C intracellular anatomical structure
GO:0006623 P protein targeting to vacuole
GO:0019898 C extrinsic component of membrane
GO:0045053 P protein retention in Golgi apparatus
GO:0070062 C extracellular exosome
FPKM:1.34 TPM:0.70
4334 A_BomoMSG_c14648_g1_i1
216bp
 uncharacterized_protein_LOC101738030_isoform_X3_[Bombyx_mori]
FPKM:1.75 TPM:0.91
4335 A_BomoMSG_c14649_g1_i1
240bp
FPKM:4.60 TPM:2.39
4336 A_BomoMSG_c14650_g1_i1
339bp
 LOW_QUALITY_PROTEIN:_dynein_heavy_chain_8,_axonemal_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003341 P cilium movement
GO:0003774 F cytoskeletal motor activity
GO:0003777 F microtubule motor activity
GO:0005524 F ATP binding
GO:0005575 C cellular_component
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005858 C axonemal dynein complex
GO:0005874 C microtubule
GO:0005929 C cilium
GO:0005930 C axoneme
GO:0007018 P microtubule-based movement
GO:0007368 P determination of left/right symmetry
GO:0007507 P heart development
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0016887 F ATP hydrolysis activity
GO:0021670 P lateral ventricle development
GO:0030286 C dynein complex
GO:0030317 P flagellated sperm motility
GO:0036157 C outer dynein arm
GO:0036158 P outer dynein arm assembly
GO:0042384 P cilium assembly
GO:0042995 C cell projection
FPKM:0.63 TPM:0.33
4337 A_BomoMSG_c14650_g2_i1
243bp
 LOW_QUALITY_PROTEIN:_dynein_heavy_chain_8,_axonemal_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003674 F molecular_function
GO:0003774 F cytoskeletal motor activity
GO:0003777 F microtubule motor activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005929 C cilium
GO:0007018 P microtubule-based movement
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0016887 F ATP hydrolysis activity
GO:0030286 C dynein complex
GO:0031514 C motile cilium
GO:0036157 C outer dynein arm
GO:0042995 C cell projection
GO:0097228 C sperm principal piece
FPKM:1.91 TPM:0.99
4338 A_BomoMSG_c14652_g1_i1
264bp
FPKM:5.23 TPM:2.72
4339 A_BomoMSG_c14653_g1_i1
353bp
 uncharacterized_protein_LOC101741497_[Bombyx_mori]
FPKM:1.77 TPM:0.92
4340 A_BomoMSG_c14655_g1_i1
268bp
FPKM:7.08 TPM:3.68
4341 A_BomoMSG_c14657_g1_i1
224bp
FPKM:6.30 TPM:3.28
4342 A_BomoMSG_c14659_g1_i1
480bp
FPKM:2.00 TPM:1.04
4343 A_BomoMSG_c14660_g1_i1
579bp
FPKM:5.59 TPM:2.91
4344 A_BomoMSG_c14661_g1_i1
291bp
 uncharacterized_protein_LOC101743520_[Bombyx_mori]
FPKM:2.97 TPM:1.55
4345 A_BomoMSG_c14663_g1_i1
285bp
FPKM:3.10 TPM:1.61
4346 A_BomoMSG_c14666_g1_i1
358bp
FPKM:2.88 TPM:1.50
4347 A_BomoMSG_c14666_g2_i1
234bp
FPKM:2.10 TPM:1.09
4348 A_BomoMSG_c14667_g1_i1
251bp
 F-actin-methionine_sulfoxide_oxidase_Mical_isoform_X2_[Bombyx_mori]
FPKM:2.35 TPM:1.22
4349 A_BomoMSG_c14668_g1_i1
257bp
FPKM:0.56 TPM:0.29
4350 A_BomoMSG_c14669_g1_i1
251bp
FPKM:4.12 TPM:2.14
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