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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
4111 A_BomoMSG_c14366_g1_i1
261bp
 PREDICTED:_uncharacterized_protein_LOC105383056_[Plutella_xylostella]
FPKM:6.98 TPM:3.63
4112 A_BomoMSG_c14369_g1_i1
2514bp
 beta-N-acetylglucosaminidase_1_isoform_X1_[Bombyx_mori]
GO:0000272 P polysaccharide catabolic process
GO:0004553 F hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004563 F beta-N-acetylhexosaminidase activity
GO:0005575 C cellular_component
GO:0005975 P carbohydrate metabolic process
GO:0006032 P chitin catabolic process
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
FPKM:34.93 TPM:18.17
4113 A_BomoMSG_c14369_g1_i2
2145bp
 beta-N-acetylglucosaminidase_1_isoform_X1_[Bombyx_mori]
GO:0000272 P polysaccharide catabolic process
GO:0004553 F hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004563 F beta-N-acetylhexosaminidase activity
GO:0005575 C cellular_component
GO:0005975 P carbohydrate metabolic process
GO:0006032 P chitin catabolic process
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
FPKM:85.58 TPM:44.52
4114 A_BomoMSG_c14369_g1_i3
2073bp
 beta-N-acetylglucosaminidase_1_isoform_X1_[Bombyx_mori]
GO:0000272 P polysaccharide catabolic process
GO:0004553 F hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004563 F beta-N-acetylhexosaminidase activity
GO:0005575 C cellular_component
GO:0005975 P carbohydrate metabolic process
GO:0006032 P chitin catabolic process
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
FPKM:451.60 TPM:234.93
4115 A_BomoMSG_c14369_g1_i4
2442bp
 beta-N-acetylglucosaminidase_1_isoform_X1_[Bombyx_mori]
GO:0000272 P polysaccharide catabolic process
GO:0004553 F hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004563 F beta-N-acetylhexosaminidase activity
GO:0005575 C cellular_component
GO:0005975 P carbohydrate metabolic process
GO:0006032 P chitin catabolic process
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
FPKM:118.37 TPM:61.58
4116 A_BomoMSG_c1436_g1_i1
319bp
FPKM:2.48 TPM:1.29
4117 A_BomoMSG_c14370_g1_i1
361bp
 uncharacterized_protein_LOC110386636,_partial_[Bombyx_mori]
FPKM:3.13 TPM:1.63
4118 A_BomoMSG_c14371_g1_i1
205bp
FPKM:4.09 TPM:2.13
4119 A_BomoMSG_c14372_g1_i1
1054bp
 COP9_signalosome_complex_subunit_7b_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0008180 C COP9 signalosome
GO:0010388 P protein deneddylation
FPKM:18.68 TPM:9.72
4120 A_BomoMSG_c14373_g1_i1
383bp
FPKM:3.09 TPM:1.61
4121 A_BomoMSG_c14374_g1_i1
717bp
FPKM:1.90 TPM:0.99
4122 A_BomoMSG_c14375_g1_i1
477bp
FPKM:3.48 TPM:1.81
4123 A_BomoMSG_c14376_g1_i1
505bp
 protein_patched_[Bombyx_mori]
GO:0001746 P Bolwig's organ morphogenesis
GO:0004888 F transmembrane signaling receptor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0005929 C cilium
GO:0006508 P proteolysis
GO:0006898 P receptor-mediated endocytosis
GO:0007224 P smoothened signaling pathway
GO:0007275 P multicellular organism development
GO:0007346 P regulation of mitotic cell cycle
GO:0007350 P blastoderm segmentation
GO:0007367 P segment polarity determination
GO:0007411 P axon guidance
GO:0007422 P peripheral nervous system development
GO:0007455 P eye-antennal disc morphogenesis
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0008158 F hedgehog receptor activity
GO:0008406 P gonad development
GO:0009880 P embryonic pattern specification
GO:0009952 P anterior/posterior pattern specification
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016311 P dephosphorylation
GO:0030139 C endocytic vesicle
GO:0030228 F lipoprotein particle receptor activity
GO:0030707 P ovarian follicle cell development
GO:0035225 P determination of genital disc primordium
GO:0042078 P germ-line stem cell division
GO:0042306 P regulation of protein import into nucleus
GO:0042981 P regulation of apoptotic process
GO:0045169 C fusome
GO:0045879 P negative regulation of smoothened signaling pathway
GO:0048099 P anterior/posterior lineage restriction, imaginal disc
GO:0048100 P wing disc anterior/posterior pattern formation
GO:0048103 P somatic stem cell division
GO:0048471 C perinuclear region of cytoplasm
GO:0048477 P oogenesis
GO:0055088 P lipid homeostasis
GO:2000274 P regulation of epithelial cell migration, open tracheal system
FPKM:3.04 TPM:1.58
4124 A_BomoMSG_c14377_g1_i1
474bp
 protein_app1_isoform_X2_[Helicoverpa_armigera]
GO:0005515 F protein binding
FPKM:1.34 TPM:0.70
4125 A_BomoMSG_c14377_g1_i2
1635bp
 actin-binding_protein_isoform_X1_[Helicoverpa_armigera]
GO:0005515 F protein binding
FPKM:16.15 TPM:8.40
4126 A_BomoMSG_c14378_g1_i1
470bp
 DNA-binding_protein_Ewg_isoform_X5_[Bombyx_mori]
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001046 F core promoter sequence-specific DNA binding
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005667 C transcription regulator complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0007005 P mitochondrion organization
GO:0042803 F protein homodimerization activity
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0070062 C extracellular exosome
FPKM:1.77 TPM:0.92
4127 A_BomoMSG_c14378_g1_i2
646bp
 DNA-binding_protein_Ewg_isoform_X5_[Bombyx_mori]
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001046 F core promoter sequence-specific DNA binding
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005667 C transcription regulator complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0007005 P mitochondrion organization
GO:0042803 F protein homodimerization activity
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0070062 C extracellular exosome
FPKM:2.97 TPM:1.54
4128 A_BomoMSG_c14379_g1_i1
349bp
 ribosomal_protein_L12_[Bombyx_mori]
GO:0000027 P ribosomal large subunit assembly
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005840 C ribosome
GO:0006412 P translation
GO:0022625 C cytosolic large ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0045901 P positive regulation of translational elongation
GO:0070180 F large ribosomal subunit rRNA binding
FPKM:6.93 TPM:3.60
4129 A_BomoMSG_c1437_g1_i1
2342bp
 mitochondrial_phosphoenolpyruvate_carboxykinase_isoform_2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004611 F phosphoenolpyruvate carboxykinase activity
GO:0004613 F phosphoenolpyruvate carboxykinase (GTP) activity
GO:0005525 F GTP binding
GO:0005739 C mitochondrion
GO:0006094 P gluconeogenesis
GO:0016829 F lyase activity
GO:0016831 F carboxy-lyase activity
GO:0017076 F purine nucleotide binding
GO:0046872 F metal ion binding
FPKM:33.75 TPM:17.56
4130 A_BomoMSG_c14380_g1_i1
291bp
FPKM:6.79 TPM:3.53
4131 A_BomoMSG_c14380_g2_i1
289bp
FPKM:3.88 TPM:2.02
4132 A_BomoMSG_c14381_g1_i1
3688bp
 saposin-like_protein_[Bombyx_mori]
GO:0001664 F G protein-coupled receptor binding
GO:0002576 P platelet degranulation
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0006629 P lipid metabolic process
GO:0006665 P sphingolipid metabolic process
GO:0006687 P glycosphingolipid metabolic process
GO:0006869 P lipid transport
GO:0007193 P adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway
GO:0008047 F enzyme activator activity
GO:0008289 F lipid binding
GO:0010506 P regulation of autophagy
GO:0016021 C integral component of membrane
GO:0019216 P regulation of lipid metabolic process
GO:0043085 P positive regulation of catalytic activity
GO:0043202 C lysosomal lumen
GO:0043408 P regulation of MAPK cascade
GO:0043410 P positive regulation of MAPK cascade
GO:0048589 P developmental growth
GO:0060736 P prostate gland growth
GO:0060742 P epithelial cell differentiation involved in prostate gland development
GO:0070062 C extracellular exosome
GO:0071310 P cellular response to organic substance
GO:1903206 P negative regulation of hydrogen peroxide-induced cell death
FPKM:61.98 TPM:32.24
4133 A_BomoMSG_c14381_g1_i2
3643bp
 saposin-like_protein_[Bombyx_mori]
GO:0001664 F G protein-coupled receptor binding
GO:0002576 P platelet degranulation
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0006629 P lipid metabolic process
GO:0006665 P sphingolipid metabolic process
GO:0006687 P glycosphingolipid metabolic process
GO:0006869 P lipid transport
GO:0007193 P adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway
GO:0008047 F enzyme activator activity
GO:0008289 F lipid binding
GO:0010506 P regulation of autophagy
GO:0016021 C integral component of membrane
GO:0019216 P regulation of lipid metabolic process
GO:0043085 P positive regulation of catalytic activity
GO:0043202 C lysosomal lumen
GO:0043408 P regulation of MAPK cascade
GO:0043410 P positive regulation of MAPK cascade
GO:0048589 P developmental growth
GO:0060736 P prostate gland growth
GO:0060742 P epithelial cell differentiation involved in prostate gland development
GO:0070062 C extracellular exosome
GO:0071310 P cellular response to organic substance
GO:1903206 P negative regulation of hydrogen peroxide-induced cell death
FPKM:0.00 TPM:0.00
4134 A_BomoMSG_c14382_g1_i1
479bp
FPKM:28.59 TPM:14.87
4135 A_BomoMSG_c14383_g1_i1
1300bp
 dehydrogenase/reductase_SDR_family_member_4_[Bombyx_mori]
GO:0004090 F carbonyl reductase (NADPH) activity
GO:0005739 C mitochondrion
GO:0005777 C peroxisome
GO:0008152 P metabolic process
GO:0016491 F oxidoreductase activity
GO:0055114 P obsolete oxidation-reduction process
FPKM:50.40 TPM:26.22
4136 A_BomoMSG_c14386_g1_i1
1003bp
 39S_ribosomal_protein_L9,_mitochondrial_[Bombyx_mori]
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005739 C mitochondrion
GO:0005762 C mitochondrial large ribosomal subunit
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
FPKM:28.08 TPM:14.61
4137 A_BomoMSG_c14387_g1_i1
603bp
 SET_and_MYND_domain-containing_protein_4_[Bombyx_mori]
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0009925 C basal plasma membrane
GO:0016020 C membrane
GO:1903955 P positive regulation of protein targeting to mitochondrion
FPKM:5.42 TPM:2.82
4138 A_BomoMSG_c14388_g1_i1
423bp
 DE-cadherin_isoform_X4_[Bombyx_mori]
GO:0000902 P cell morphogenesis
GO:0001738 P morphogenesis of a polarized epithelium
GO:0001745 P compound eye morphogenesis
GO:0001748 P insect visual primordium development
GO:0002009 P morphogenesis of an epithelium
GO:0003151 P outflow tract morphogenesis
GO:0004872 F signaling receptor activity
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0005912 C adherens junction
GO:0005913 C adherens junction
GO:0005914 C spot adherens junction
GO:0005915 C zonula adherens
GO:0005938 C cell cortex
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007163 P establishment or maintenance of cell polarity
GO:0007280 P pole cell migration
GO:0007281 P germ cell development
GO:0007297 P ovarian follicle cell migration
GO:0007298 P border follicle cell migration
GO:0007314 P oocyte anterior/posterior axis specification
GO:0007370 P ventral furrow formation
GO:0007379 P segment specification
GO:0007399 P nervous system development
GO:0007409 P axonogenesis
GO:0007411 P axon guidance
GO:0007420 P brain development
GO:0007424 P open tracheal system development
GO:0007435 P salivary gland morphogenesis
GO:0007506 P gonadal mesoderm development
GO:0007507 P heart development
GO:0008013 F beta-catenin binding
GO:0008105 P protein localization
GO:0008258 P head involution
GO:0008354 P germ cell migration
GO:0008356 P asymmetric cell division
GO:0008406 P gonad development
GO:0010004 P gastrulation involving germ band extension
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016318 P ommatidial rotation
GO:0016337 P cell-cell adhesion
GO:0016339 P calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0016342 C catenin complex
GO:0017022 F myosin binding
GO:0030031 P cell projection assembly
GO:0030175 C filopodium
GO:0030708 P germarium-derived female germ-line cyst encapsulation
GO:0030720 P oocyte localization involved in germarium-derived egg chamber formation
GO:0035019 P somatic stem cell population maintenance
GO:0035099 P hemocyte migration
GO:0035147 P branch fusion, open tracheal system
GO:0035160 P maintenance of epithelial integrity, open tracheal system
GO:0035212 P cell competition in a multicellular organism
GO:0035262 P gonad morphogenesis
GO:0036099 P female germ-line stem cell population maintenance
GO:0042060 P wound healing
GO:0042078 P germ-line stem cell division
GO:0042803 F protein homodimerization activity
GO:0043296 C apical junction complex
GO:0044331 P cell-cell adhesion mediated by cadherin
GO:0045176 P apical protein localization
GO:0045186 P zonula adherens assembly
GO:0046872 F metal ion binding
GO:0048103 P somatic stem cell division
GO:0048477 P oogenesis
GO:0050832 P defense response to fungus
GO:0050839 F cell adhesion molecule binding
GO:0055037 C recycling endosome
GO:0071907 P determination of digestive tract left/right asymmetry
GO:0098730 P male germline stem cell symmetric division
FPKM:3.07 TPM:1.60
4139 A_BomoMSG_c14389_g1_i1
352bp
FPKM:4.75 TPM:2.47
4140 A_BomoMSG_c14389_g1_i2
338bp
FPKM:0.00 TPM:0.00
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