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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
3931 A_BomoMSG_c141_g1_i1
268bp
 piggyBac_transposable_element-derived_protein_4_isoform_X4_[Bombyx_mori]
FPKM:0.51 TPM:0.26
3932 A_BomoMSG_c14200_g1_i1
846bp
 receptor_expression_enhancing_protein_isoform_X1_[Bombyx_mori]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0070062 C extracellular exosome
FPKM:7.90 TPM:4.11
3933 A_BomoMSG_c14200_g1_i2
895bp
 receptor_expression_enhancing_protein_isoform_X1_[Bombyx_mori]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0070062 C extracellular exosome
FPKM:43.93 TPM:22.85
3934 A_BomoMSG_c14200_g1_i3
787bp
 receptor_expression_enhancing_protein_isoform_2_[Bombyx_mori]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:157.45 TPM:81.91
3935 A_BomoMSG_c14200_g1_i4
738bp
 receptor_expression_enhancing_protein_isoform_1_[Bombyx_mori]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:41.10 TPM:21.38
3936 A_BomoMSG_c14201_g1_i1
575bp
FPKM:0.00 TPM:0.00
3937 A_BomoMSG_c14201_g1_i2
842bp
FPKM:4.76 TPM:2.48
3938 A_BomoMSG_c14202_g1_i1
596bp
 glycerophosphoryl_diester_phosphodiesterase_precursor_[Bombyx_mori]
GO:0006071 P glycerol metabolic process
GO:0006629 P lipid metabolic process
GO:0008081 F phosphoric diester hydrolase activity
GO:0008889 F glycerophosphodiester phosphodiesterase activity
GO:0016787 F hydrolase activity
FPKM:3.63 TPM:1.89
3939 A_BomoMSG_c14203_g1_i1
325bp
 cytoplasmic_tRNA_2-thiolation_protein_1_isoform_X2_[Bombyx_mori]
FPKM:2.74 TPM:1.43
3940 A_BomoMSG_c14204_g1_i1
875bp
 probable_multidrug_resistance-associated_protein_lethal(2)03659_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0006810 P transport
GO:0007275 P multicellular organism development
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0055085 P transmembrane transport
FPKM:1.65 TPM:0.86
3941 A_BomoMSG_c14204_g1_i2
393bp
 probable_multidrug_resistance-associated_protein_lethal(2)03659_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0006810 P transport
GO:0007275 P multicellular organism development
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0055085 P transmembrane transport
FPKM:0.00 TPM:0.00
3942 A_BomoMSG_c14205_g1_i1
315bp
FPKM:7.26 TPM:3.78
3943 A_BomoMSG_c14206_g1_i1
691bp
 G10_protein_[Bombyx_mori]
GO:0005634 C nucleus
FPKM:33.77 TPM:17.57
3944 A_BomoMSG_c14207_g1_i1
314bp
FPKM:2.92 TPM:1.52
3945 A_BomoMSG_c1420_g1_i1
573bp
FPKM:3.82 TPM:1.99
3946 A_BomoMSG_c14212_g1_i1
4463bp
 moesin/ezrin/radixin_homolog_1_isoform_X1_[Bombyx_mori]
GO:0003779 F actin binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005912 C adherens junction
GO:0008092 F cytoskeletal protein binding
GO:0016020 C membrane
GO:0019898 C extrinsic component of membrane
GO:0030054 C cell junction
GO:0045197 P establishment or maintenance of epithelial cell apical/basal polarity
FPKM:44.62 TPM:23.21
3947 A_BomoMSG_c14212_g1_i2
4446bp
 moesin/ezrin/radixin_homolog_1_isoform_X2_[Bombyx_mori]
GO:0000132 P establishment of mitotic spindle orientation
GO:0000902 P cell morphogenesis
GO:0000912 P assembly of actomyosin apparatus involved in cytokinesis
GO:0002009 P morphogenesis of an epithelium
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005546 F phosphatidylinositol-4,5-bisphosphate binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005819 C spindle
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005884 C actin filament
GO:0005886 C plasma membrane
GO:0005912 C adherens junction
GO:0005938 C cell cortex
GO:0007010 P cytoskeleton organization
GO:0007052 P mitotic spindle organization
GO:0007091 P metaphase/anaphase transition of mitotic cell cycle
GO:0007314 P oocyte anterior/posterior axis specification
GO:0007315 P pole plasm assembly
GO:0007318 P pole plasm protein localization
GO:0007368 P determination of left/right symmetry
GO:0007399 P nervous system development
GO:0008017 F microtubule binding
GO:0008092 F cytoskeletal protein binding
GO:0008104 P protein localization
GO:0008284 P positive regulation of cell population proliferation
GO:0008360 P regulation of cell shape
GO:0009952 P anterior/posterior pattern specification
GO:0015629 C actin cytoskeleton
GO:0016020 C membrane
GO:0016057 P regulation of membrane potential in photoreceptor cell
GO:0016324 C apical plasma membrane
GO:0016336 P establishment or maintenance of polarity of larval imaginal disc epithelium
GO:0019898 C extrinsic component of membrane
GO:0030029 P actin filament-based process
GO:0030036 P actin cytoskeleton organization
GO:0030054 C cell junction
GO:0030866 P cortical actin cytoskeleton organization
GO:0032154 C cleavage furrow
GO:0032956 P regulation of actin cytoskeleton organization
GO:0034453 P microtubule anchoring
GO:0035003 C subapical complex
GO:0035088 P establishment or maintenance of apical/basal cell polarity
GO:0035149 P lumen formation, open tracheal system
GO:0042048 P olfactory behavior
GO:0042052 P rhabdomere development
GO:0042462 P eye photoreceptor cell development
GO:0043622 P cortical microtubule organization
GO:0045169 C fusome
GO:0045197 P establishment or maintenance of epithelial cell apical/basal polarity
GO:0045313 P rhabdomere membrane biogenesis
GO:0045433 P male courtship behavior, veined wing generated song production
GO:0045807 P positive regulation of endocytosis
GO:0051653 P spindle localization
GO:0072499 P photoreceptor cell axon guidance
GO:1902846 P positive regulation of mitotic spindle elongation
GO:1990023 C mitotic spindle midzone
FPKM:78.59 TPM:40.88
3948 A_BomoMSG_c14213_g1_i1
327bp
FPKM:5.08 TPM:2.64
3949 A_BomoMSG_c14214_g1_i1
1273bp
 homeobox_protein_5_isoform_X8_[Bombyx_mori]
GO:0046872 F metal ion binding
FPKM:3.36 TPM:1.75
3950 A_BomoMSG_c14215_g1_i1
353bp
FPKM:4.43 TPM:2.30
3951 A_BomoMSG_c14216_g1_i1
295bp
FPKM:0.00 TPM:0.00
3952 A_BomoMSG_c14216_g1_i2
1126bp
FPKM:54.60 TPM:28.40
3953 A_BomoMSG_c14217_g1_i1
2390bp
 hypothetical_protein_RR46_08662_[Papilio_xuthus]
FPKM:54.61 TPM:28.41
3954 A_BomoMSG_c14218_g1_i1
205bp
FPKM:2.04 TPM:1.06
3955 A_BomoMSG_c14220_g1_i1
1917bp
 hsc70-interacting_protein_[Bombyx_mori]
GO:0005737 C cytoplasm
FPKM:13.40 TPM:6.97
3956 A_BomoMSG_c14220_g1_i2
1902bp
 hsc70-interacting_protein_[Bombyx_mori]
GO:0005737 C cytoplasm
FPKM:97.64 TPM:50.80
3957 A_BomoMSG_c14221_g1_i1
1061bp
 general_transcription_factor_IIE_subunit_2_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005673 C transcription factor TFIIE complex
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0006368 P transcription elongation from RNA polymerase II promoter
GO:0042795 P snRNA transcription by RNA polymerase II
GO:0044822 F RNA binding
FPKM:17.68 TPM:9.20
3958 A_BomoMSG_c14222_g1_i1
944bp
FPKM:77.38 TPM:40.25
3959 A_BomoMSG_c14223_g1_i1
364bp
FPKM:3.08 TPM:1.60
3960 A_BomoMSG_c14224_g1_i1
707bp
FPKM:3.01 TPM:1.57
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