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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
421 A_BomoMSG_c10471_g1_i1
318bp
 uncharacterized_protein_LOC101743016_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0006605 P protein targeting
GO:0006996 P organelle organization
GO:0007040 P lysosome organization
GO:0007596 P blood coagulation
GO:0007599 P hemostasis
GO:0016020 C membrane
GO:0016023 C cytoplasmic vesicle
GO:0030318 P melanocyte differentiation
GO:0031085 C BLOC-3 complex
GO:0042470 C melanosome
GO:0042803 F protein homodimerization activity
GO:0042827 C platelet dense granule
GO:0046983 F protein dimerization activity
GO:0048075 P positive regulation of eye pigmentation
GO:0050821 P protein stabilization
GO:1903955 P positive regulation of protein targeting to mitochondrion
FPKM:2.50 TPM:1.30
422 A_BomoMSG_c10472_g1_i1
307bp
 hypothetical_protein_RR48_00071_[Papilio_machaon]
FPKM:2.67 TPM:1.39
423 A_BomoMSG_c10473_g1_i1
960bp
 kynurenine_formamidase_[Bombyx_mori]
GO:0004061 F arylformamidase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006569 P tryptophan catabolic process
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0019441 P tryptophan catabolic process to kynurenine
GO:0034354 P 'de novo' NAD biosynthetic process from tryptophan
FPKM:19.51 TPM:10.15
424 A_BomoMSG_c10473_g1_i2
903bp
 kynurenine_formamidase_[Bombyx_mori]
GO:0004061 F arylformamidase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006569 P tryptophan catabolic process
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0019441 P tryptophan catabolic process to kynurenine
GO:0034354 P 'de novo' NAD biosynthetic process from tryptophan
FPKM:5.86 TPM:3.05
425 A_BomoMSG_c10473_g1_i3
860bp
 kynurenine_formamidase_[Bombyx_mori]
GO:0004061 F arylformamidase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006569 P tryptophan catabolic process
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0019441 P tryptophan catabolic process to kynurenine
GO:0034354 P 'de novo' NAD biosynthetic process from tryptophan
FPKM:6.36 TPM:3.31
426 A_BomoMSG_c10475_g1_i1
364bp
FPKM:1.68 TPM:0.87
427 A_BomoMSG_c10476_g1_i1
230bp
FPKM:8.80 TPM:4.58
428 A_BomoMSG_c10478_g1_i1
240bp
FPKM:6.57 TPM:3.42
429 A_BomoMSG_c1047_g1_i1
320bp
 uncharacterized_protein_LOC101741222_isoform_X1_[Bombyx_mori]
FPKM:3.17 TPM:1.65
430 A_BomoMSG_c10480_g1_i1
348bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:1.51 TPM:0.79
431 A_BomoMSG_c10481_g1_i1
297bp
 uncharacterized_protein_LOC101736599_[Bombyx_mori]
FPKM:8.55 TPM:4.45
432 A_BomoMSG_c10482_g1_i1
293bp
FPKM:14.65 TPM:7.62
433 A_BomoMSG_c10483_g1_i1
281bp
 rho_GTPase-activating_protein_190_isoform_X3_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0005525 F GTP binding
GO:0005575 C cellular_component
GO:0005622 C intracellular anatomical structure
GO:0007165 P signal transduction
GO:0007264 P small GTPase mediated signal transduction
GO:0007266 P Rho protein signal transduction
GO:0007275 P multicellular organism development
GO:0007415 P defasciculation of motor neuron axon
GO:0016319 P mushroom body development
GO:0030215 F semaphorin receptor binding
GO:0043547 P positive regulation of GTPase activity
GO:0045792 P negative regulation of cell size
GO:0050770 P regulation of axonogenesis
FPKM:6.39 TPM:3.32
434 A_BomoMSG_c10484_g1_i1
376bp
FPKM:1.33 TPM:0.69
435 A_BomoMSG_c10485_g1_i1
1165bp
 carotenoid-binding_protein_[Bombyx_mori]
GO:0006694 P steroid biosynthetic process
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0008289 F lipid binding
FPKM:222.48 TPM:115.74
436 A_BomoMSG_c10485_g1_i2
931bp
 carotenoid-binding_protein_[Bombyx_mori]
GO:0006694 P steroid biosynthetic process
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0008289 F lipid binding
FPKM:265.63 TPM:138.18
437 A_BomoMSG_c10486_g1_i1
612bp
 ankyrin_repeat_domain-containing_protein_17_[Bombyx_mori]
FPKM:4.38 TPM:2.28
438 A_BomoMSG_c10487_g1_i1
320bp
FPKM:11.63 TPM:6.05
439 A_BomoMSG_c10488_g1_i1
308bp
FPKM:5.31 TPM:2.76
440 A_BomoMSG_c10490_g1_i1
375bp
 hormone-sensitive_lipase_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005811 C lipid droplet
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0005901 C caveola
GO:0006361 P transcription initiation from RNA polymerase I promoter
GO:0006363 P termination of RNA polymerase I transcription
GO:0006629 P lipid metabolic process
GO:0008152 P metabolic process
GO:0008202 P steroid metabolic process
GO:0008203 P cholesterol metabolic process
GO:0016020 C membrane
GO:0016042 P lipid catabolic process
GO:0016298 F lipase activity
GO:0016787 F hydrolase activity
GO:0019433 P triglyceride catabolic process
GO:0033878 F hormone-sensitive lipase activity
GO:0042134 F rRNA primary transcript binding
FPKM:3.73 TPM:1.94
441 A_BomoMSG_c10491_g1_i1
742bp
FPKM:4.65 TPM:2.42
442 A_BomoMSG_c10492_g1_i1
324bp
FPKM:3.79 TPM:1.97
443 A_BomoMSG_c10494_g1_i1
214bp
FPKM:2.69 TPM:1.40
444 A_BomoMSG_c10495_g1_i1
231bp
FPKM:2.17 TPM:1.13
445 A_BomoMSG_c10496_g1_i1
471bp
 PREDICTED:_uncharacterized_protein_LOC106711740_isoform_X1_[Papilio_machaon]
FPKM:1.87 TPM:0.97
446 A_BomoMSG_c10497_g1_i1
218bp
FPKM:9.35 TPM:4.86
447 A_BomoMSG_c1049_g1_i1
302bp
FPKM:2.36 TPM:1.23
448 A_BomoMSG_c10500_g1_i1
790bp
 immunoglobulin-binding_protein_1_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005874 C microtubule
GO:0008601 F protein phosphatase regulator activity
GO:0009966 P regulation of signal transduction
GO:0019904 F protein domain specific binding
GO:0031434 F mitogen-activated protein kinase kinase binding
GO:0032403 F protein-containing complex binding
GO:0032873 P negative regulation of stress-activated MAPK cascade
GO:0034047 P regulation of phosphoprotein phosphatase activity
GO:0034612 P response to tumor necrosis factor
GO:0035306 P positive regulation of dephosphorylation
GO:0035308 P negative regulation of protein dephosphorylation
GO:0042113 P B cell activation
GO:0043154 P negative regulation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0051721 F protein phosphatase 2A binding
GO:0060632 P regulation of microtubule-based movement
GO:0070555 P response to interleukin-1
GO:2001234 P negative regulation of apoptotic signaling pathway
FPKM:3.56 TPM:1.85
449 A_BomoMSG_c10501_g1_i1
260bp
 PREDICTED:_tyrosine-protein_phosphatase_Lar-like_[Amyelois_transitella]
GO:0001700 P embryonic development via the syncytial blastoderm
GO:0004721 F phosphoprotein phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0005001 F transmembrane receptor protein tyrosine phosphatase activity
GO:0005515 F protein binding
GO:0005875 C microtubule associated complex
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0006470 P protein dephosphorylation
GO:0007155 P cell adhesion
GO:0007283 P spermatogenesis
GO:0007399 P nervous system development
GO:0007411 P axon guidance
GO:0007412 P axon target recognition
GO:0008045 P motor neuron axon guidance
GO:0008201 F heparin binding
GO:0008360 P regulation of cell shape
GO:0008594 P photoreceptor cell morphogenesis
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0030424 C axon
GO:0031290 P retinal ganglion cell axon guidance
GO:0032093 F SAM domain binding
GO:0035335 P peptidyl-tyrosine dephosphorylation
GO:0045467 P R7 cell development
GO:0048477 P oogenesis
GO:0048675 P axon extension
GO:0048841 P regulation of axon extension involved in axon guidance
GO:0051124 P synaptic assembly at neuromuscular junction
GO:1903386 P negative regulation of homophilic cell adhesion
FPKM:2.17 TPM:1.13
450 A_BomoMSG_c10502_g1_i1
354bp
FPKM:4.11 TPM:2.14
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