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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
3841 A_BomoMSG_c14114_g2_i1
458bp
 uncharacterized_protein_LOC101739397_isoform_X2_[Bombyx_mori]
FPKM:1.75 TPM:0.91
3842 A_BomoMSG_c14115_g1_i1
515bp
FPKM:5.42 TPM:2.82
3843 A_BomoMSG_c14116_g1_i1
377bp
FPKM:3.17 TPM:1.65
3844 A_BomoMSG_c14117_g1_i1
398bp
FPKM:6.28 TPM:3.27
3845 A_BomoMSG_c14118_g1_i1
600bp
 uncharacterized_protein_LOC101736183_[Bombyx_mori]
GO:0000060 P obsolete protein import into nucleus, translocation
GO:0002268 P follicular dendritic cell differentiation
GO:0002315 P marginal zone B cell differentiation
GO:0002455 P humoral immune response mediated by circulating immunoglobulin
GO:0002467 P germinal center formation
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0007249 P I-kappaB kinase/NF-kappaB signaling
GO:0008134 F transcription factor binding
GO:0009615 P response to virus
GO:0010225 P response to UV-C
GO:0019730 P antimicrobial humoral response
GO:0030198 P extracellular matrix organization
GO:0030330 P DNA damage response, signal transduction by p53 class mediator
GO:0032729 P positive regulation of interferon-gamma production
GO:0032996 C Bcl3-Bcl10 complex
GO:0033257 C Bcl3/NF-kappaB2 complex
GO:0042088 P T-helper 1 type immune response
GO:0042345 P regulation of NIK/NF-kappaB signaling
GO:0042536 P negative regulation of tumor necrosis factor production
GO:0042742 P defense response to bacterium
GO:0042771 P intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator
GO:0042832 P defense response to protozoan
GO:0042981 P regulation of apoptotic process
GO:0043066 P negative regulation of apoptotic process
GO:0043234 C protein-containing complex
GO:0045064 P T-helper 2 cell differentiation
GO:0045082 P positive regulation of interleukin-10 production
GO:0045171 C intercellular bridge
GO:0045415 P negative regulation of interleukin-8 production
GO:0045727 P positive regulation of translation
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048471 C perinuclear region of cytoplasm
GO:0048536 P spleen development
GO:0051101 P regulation of DNA binding
FPKM:3.59 TPM:1.87
3846 A_BomoMSG_c14119_g1_i1
222bp
FPKM:4.04 TPM:2.10
3847 A_BomoMSG_c1411_g1_i1
257bp
 zinc_finger_protein_GLI4_isoform_X1_[Helicoverpa_armigera]
FPKM:2.23 TPM:1.16
3848 A_BomoMSG_c14120_g1_i1
279bp
FPKM:3.71 TPM:1.93
3849 A_BomoMSG_c14120_g2_i1
730bp
 NADPH-dependent_diflavin_oxidoreductase_1_isoform_X1_[Bombyx_mori]
GO:0003958 F NADPH-hemoprotein reductase activity
GO:0005506 F iron ion binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0008219 P cell death
GO:0010181 F FMN binding
GO:0016226 P iron-sulfur cluster assembly
GO:0016491 F oxidoreductase activity
GO:0016651 F oxidoreductase activity, acting on NAD(P)H
GO:0036245 P cellular response to menadione
GO:0048471 C perinuclear region of cytoplasm
GO:0050660 F flavin adenine dinucleotide binding
GO:0050661 F NADP binding
GO:0055114 P obsolete oxidation-reduction process
FPKM:1.86 TPM:0.97
3850 A_BomoMSG_c14120_g2_i2
674bp
 NADPH-dependent_diflavin_oxidoreductase_1_isoform_X1_[Bombyx_mori]
GO:0003958 F NADPH-hemoprotein reductase activity
GO:0005506 F iron ion binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0008219 P cell death
GO:0010181 F FMN binding
GO:0016226 P iron-sulfur cluster assembly
GO:0016491 F oxidoreductase activity
GO:0016651 F oxidoreductase activity, acting on NAD(P)H
GO:0036245 P cellular response to menadione
GO:0048471 C perinuclear region of cytoplasm
GO:0050660 F flavin adenine dinucleotide binding
GO:0050661 F NADP binding
GO:0055114 P obsolete oxidation-reduction process
FPKM:0.00 TPM:0.00
3851 A_BomoMSG_c14121_g1_i1
300bp
 vacuolar_protein_sorting-associated_protein_16_homolog_[Bombyx_mori]
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005770 C late endosome
GO:0005776 C autophagosome
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006914 P autophagy
GO:0007033 P vacuole organization
GO:0008333 P endosome to lysosome transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0030136 C clathrin-coated vesicle
GO:0030424 C axon
GO:0030897 C HOPS complex
GO:0031410 C cytoplasmic vesicle
GO:0031902 C late endosome membrane
GO:0032889 P regulation of vacuole fusion, non-autophagic
GO:0035542 P regulation of SNARE complex assembly
GO:0043025 C neuronal cell body
GO:0051015 F actin filament binding
GO:0055037 C recycling endosome
GO:0097352 P autophagosome maturation
FPKM:4.39 TPM:2.28
3852 A_BomoMSG_c14122_g1_i1
289bp
 telomerase_Cajal_body_protein_1_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005697 C telomerase holoenzyme complex
GO:0005737 C cytoplasm
GO:0015030 C Cajal body
GO:0032203 P telomere formation via telomerase
GO:0032212 P positive regulation of telomere maintenance via telomerase
GO:0032403 F protein-containing complex binding
GO:0051087 F chaperone binding
GO:0051973 P positive regulation of telomerase activity
GO:0070034 F telomerase RNA binding
GO:0070200 P establishment of protein localization to telomere
GO:0090666 P scaRNA localization to Cajal body
GO:0090671 P telomerase RNA localization to Cajal body
GO:1904851 P positive regulation of establishment of protein localization to telomere
FPKM:3.88 TPM:2.02
3853 A_BomoMSG_c14123_g1_i1
261bp
FPKM:0.54 TPM:0.28
3854 A_BomoMSG_c14124_g1_i1
692bp
FPKM:3.32 TPM:1.72
3855 A_BomoMSG_c14125_g1_i1
800bp
 KAT8_regulatory_NSL_complex_subunit_1-like_protein_isoform_X2_[Bombyx_mori]
FPKM:4.51 TPM:2.35
3856 A_BomoMSG_c14126_g1_i1
375bp
FPKM:6.93 TPM:3.60
3857 A_BomoMSG_c14127_g1_i1
897bp
 nitrogen_permease_regulator_2-like_protein_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0007293 P germarium-derived egg chamber formation
GO:0032007 P negative regulation of TOR signaling
GO:0034198 P cellular response to amino acid starvation
GO:0035859 C Seh1-associated complex
GO:0038202 P TORC1 signaling
GO:0044754 C autolysosome
GO:0045792 P negative regulation of cell size
GO:0048477 P oogenesis
GO:0048813 P dendrite morphogenesis
FPKM:1.76 TPM:0.92
3858 A_BomoMSG_c14129_g1_i1
911bp
 Dronc-1_[Bombyx_mori]
GO:0001700 P embryonic development via the syncytial blastoderm
GO:0004175 F endopeptidase activity
GO:0004197 F cysteine-type endopeptidase activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006508 P proteolysis
GO:0006915 P apoptotic process
GO:0006919 P activation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0007291 P sperm individualization
GO:0007417 P central nervous system development
GO:0007423 P sensory organ development
GO:0007516 P hemocyte development
GO:0007552 P metamorphosis
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0008258 P head involution
GO:0008285 P negative regulation of cell population proliferation
GO:0008340 P determination of adult lifespan
GO:0010506 P regulation of autophagy
GO:0010623 P programmed cell death involved in cell development
GO:0010941 P regulation of cell death
GO:0012501 P programmed cell death
GO:0016322 P neuron remodeling
GO:0016540 P protein autoprocessing
GO:0016787 F hydrolase activity
GO:0031638 P zymogen activation
GO:0035006 P melanization defense response
GO:0035070 P salivary gland histolysis
GO:0035071 P salivary gland cell autophagic cell death
GO:0035234 P ectopic germ cell programmed cell death
GO:0042803 F protein homodimerization activity
GO:0043293 C apoptosome
GO:0045476 P nurse cell apoptotic process
GO:0046668 P regulation of retinal cell programmed cell death
GO:0046672 P positive regulation of compound eye retinal cell programmed cell death
GO:0048102 P autophagic cell death
GO:0048749 P compound eye development
GO:0048813 P dendrite morphogenesis
GO:0050700 F CARD domain binding
GO:0051291 P protein heterooligomerization
GO:0097190 P apoptotic signaling pathway
GO:0097199 F cysteine-type endopeptidase activity involved in apoptotic signaling pathway
GO:2001269 P positive regulation of cysteine-type endopeptidase activity involved in apoptotic signaling pathway
FPKM:3.07 TPM:1.60
3859 A_BomoMSG_c1412_g1_i1
427bp
FPKM:1.95 TPM:1.01
3860 A_BomoMSG_c14133_g1_i1
229bp
FPKM:0.00 TPM:0.00
3861 A_BomoMSG_c14133_g1_i2
292bp
FPKM:0.64 TPM:0.33
3862 A_BomoMSG_c14133_g1_i3
627bp
FPKM:5.15 TPM:2.68
3863 A_BomoMSG_c14134_g1_i1
441bp
FPKM:5.77 TPM:3.00
3864 A_BomoMSG_c14135_g1_i1
616bp
 macrophage_migration_inhibitory_factor_[Bombyx_mori]
GO:0001516 P prostaglandin biosynthetic process
GO:0001934 P positive regulation of protein phosphorylation
GO:0002376 P immune system process
GO:0002906 P negative regulation of mature B cell apoptotic process
GO:0004167 F dopachrome isomerase activity
GO:0005102 F signaling receptor binding
GO:0005125 F cytokine activity
GO:0005126 F cytokine receptor binding
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006954 P inflammatory response
GO:0007166 P cell surface receptor signaling pathway
GO:0007569 P cell aging
GO:0008283 P cell population proliferation
GO:0009986 C cell surface
GO:0010629 P negative regulation of gene expression
GO:0010739 P positive regulation of protein kinase A signaling
GO:0016853 F isomerase activity
GO:0019752 P carboxylic acid metabolic process
GO:0030330 P DNA damage response, signal transduction by p53 class mediator
GO:0030890 P positive regulation of B cell proliferation
GO:0031666 P positive regulation of lipopolysaccharide-mediated signaling pathway
GO:0031982 C vesicle
GO:0032269 P negative regulation of cellular protein metabolic process
GO:0033033 P negative regulation of myeloid cell apoptotic process
GO:0033138 P positive regulation of peptidyl-serine phosphorylation
GO:0042056 F chemoattractant activity
GO:0042127 P regulation of cell population proliferation
GO:0042289 F MHC class II protein binding
GO:0042327 P positive regulation of phosphorylation
GO:0043066 P negative regulation of apoptotic process
GO:0043209 C myelin sheath
GO:0043406 P positive regulation of MAP kinase activity
GO:0043518 P negative regulation of DNA damage response, signal transduction by p53 class mediator
GO:0045087 P innate immune response
GO:0048146 P positive regulation of fibroblast proliferation
GO:0050178 F phenylpyruvate tautomerase activity
GO:0050715 P positive regulation of cytokine production
GO:0050731 P positive regulation of peptidyl-tyrosine phosphorylation
GO:0050918 P positive chemotaxis
GO:0061078 P positive regulation of prostaglandin secretion involved in immune response
GO:0061081 P positive regulation of myeloid leukocyte cytokine production involved in immune response
GO:0070062 C extracellular exosome
GO:0070207 P protein homotrimerization
GO:0070374 P positive regulation of ERK1 and ERK2 cascade
GO:0071157 P regulation of cell cycle
GO:0090238 P positive regulation of arachidonic acid secretion
GO:0090344 P negative regulation of cell aging
GO:1902166 P negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator
GO:2000343 P positive regulation of chemokine (C-X-C motif) ligand 2 production
FPKM:78.02 TPM:40.59
3865 A_BomoMSG_c14138_g1_i1
316bp
FPKM:1.08 TPM:0.56
3866 A_BomoMSG_c14139_g1_i1
371bp
FPKM:3.25 TPM:1.69
3867 A_BomoMSG_c14140_g1_i1
262bp
FPKM:3.09 TPM:1.61
3868 A_BomoMSG_c14140_g1_i2
766bp
FPKM:3.13 TPM:1.63
3869 A_BomoMSG_c14142_g1_i1
1450bp
 mitochondrial_inner_membrane_protein_OXA1L_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005746 C mitochondrial respirasome
GO:0006461 P protein-containing complex assembly
GO:0009060 P aerobic respiration
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031966 C mitochondrial membrane
GO:0032592 C integral component of mitochondrial membrane
GO:0032780 P negative regulation of ATP-dependent activity
GO:0032981 P mitochondrial respiratory chain complex I assembly
GO:0033615 P mitochondrial proton-transporting ATP synthase complex assembly
GO:0042803 F protein homodimerization activity
GO:0043234 C protein-containing complex
GO:0051205 P protein insertion into membrane
GO:0051262 P protein tetramerization
GO:0051354 P negative regulation of oxidoreductase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0097031 P obsolete mitochondrial respiratory chain complex I biogenesis
GO:0097177 F mitochondrial ribosome binding
FPKM:25.61 TPM:13.32
3870 A_BomoMSG_c14145_g1_i1
429bp
 clustered_mitochondria_protein_homolog_isoform_X2_[Bombyx_mori]
FPKM:6.52 TPM:3.39
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