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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
3781 A_BomoMSG_c14062_g1_i1
291bp
FPKM:2.12 TPM:1.10
3782 A_BomoMSG_c14063_g1_i1
720bp
 fatty_acid-binding_protein_[Bombyx_mori]
FPKM:1.39 TPM:0.73
3783 A_BomoMSG_c14063_g1_i2
890bp
 fatty_acid-binding_protein_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005504 F fatty acid binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006810 P transport
GO:0008289 F lipid binding
GO:0050727 P regulation of inflammatory response
FPKM:36.88 TPM:19.18
3784 A_BomoMSG_c14065_g1_i1
226bp
FPKM:23.06 TPM:11.99
3785 A_BomoMSG_c14066_g1_i1
264bp
 serine/arginine_repetitive_matrix_protein_1_isoform_X1_[Bombyx_mori]
FPKM:7.85 TPM:4.08
3786 A_BomoMSG_c14066_g1_i2
258bp
 zinc_finger_CCCH_domain-containing_protein_18_isoform_X2_[Bombyx_mori]
FPKM:0.00 TPM:0.00
3787 A_BomoMSG_c14067_g1_i1
595bp
 uncharacterized_protein_LOC101736416_[Bombyx_mori]
FPKM:2.69 TPM:1.40
3788 A_BomoMSG_c14068_g1_i1
233bp
 uncharacterized_protein_LOC101742695_[Bombyx_mori]
FPKM:2.13 TPM:1.11
3789 A_BomoMSG_c14069_g1_i1
323bp
FPKM:6.57 TPM:3.42
3790 A_BomoMSG_c1406_g1_i1
207bp
FPKM:0.99 TPM:0.52
3791 A_BomoMSG_c14070_g1_i1
316bp
 glycerophosphodiester_phosphodiesterase_1_[Bombyx_mori]
FPKM:6.14 TPM:3.19
3792 A_BomoMSG_c14071_g1_i1
272bp
FPKM:5.88 TPM:3.06
3793 A_BomoMSG_c14072_g1_i1
1129bp
 tubulin-specific_chaperone_cofactor_E-like_protein_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
FPKM:2.63 TPM:1.37
3794 A_BomoMSG_c14073_g1_i1
980bp
 transcription_elongation_factor_S-II_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006368 P transcription elongation from RNA polymerase II promoter
GO:0008270 F zinc ion binding
GO:0032784 P regulation of DNA-templated transcription, elongation
GO:0046872 F metal ion binding
FPKM:37.44 TPM:19.48
3795 A_BomoMSG_c14075_g1_i1
816bp
 uncharacterized_protein_LOC101744110_isoform_X16_[Bombyx_mori]
GO:0000981 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006950 P response to stress
GO:0007165 P signal transduction
GO:0008285 P negative regulation of cell population proliferation
GO:0046872 F metal ion binding
GO:0046983 F protein dimerization activity
FPKM:5.22 TPM:2.71
3796 A_BomoMSG_c14076_g1_i1
1082bp
 broad-complex_A-NZ1_isoform_[Bombyx_mori]
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0001752 P compound eye photoreceptor fate commitment
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-templated
GO:0006914 P autophagy
GO:0007275 P multicellular organism development
GO:0007458 P progression of morphogenetic furrow involved in compound eye morphogenesis
GO:0007552 P metamorphosis
GO:0007562 P eclosion
GO:0008219 P cell death
GO:0009608 P response to symbiont
GO:0010629 P negative regulation of gene expression
GO:0010906 P regulation of glucose metabolic process
GO:0030707 P ovarian follicle cell development
GO:0035070 P salivary gland histolysis
GO:0035071 P salivary gland cell autophagic cell death
GO:0035072 P ecdysone-mediated induction of salivary gland cell autophagic cell death
GO:0035075 P response to ecdysone
GO:0035193 P larval central nervous system remodeling
GO:0040034 P regulation of development, heterochronic
GO:0042332 P gravitaxis
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0048477 P oogenesis
GO:0048747 P muscle cell development
GO:0048808 P male genitalia morphogenesis
GO:0048813 P dendrite morphogenesis
GO:0071390 P cellular response to ecdysone
FPKM:2.83 TPM:1.47
3797 A_BomoMSG_c14077_g1_i1
455bp
 PHD_finger_protein_rhinoceros_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0007275 P multicellular organism development
GO:0008270 F zinc ion binding
GO:0042051 P compound eye photoreceptor development
GO:0042059 P negative regulation of epidermal growth factor receptor signaling pathway
GO:0046872 F metal ion binding
FPKM:1.38 TPM:0.72
3798 A_BomoMSG_c14078_g1_i1
328bp
 uncharacterized_protein_LOC101739253_[Bombyx_mori]
FPKM:2.88 TPM:1.50
3799 A_BomoMSG_c14078_g1_i2
278bp
 uncharacterized_protein_LOC101739253_[Bombyx_mori]
FPKM:1.61 TPM:0.84
3800 A_BomoMSG_c14079_g1_i1
749bp
 uncharacterized_protein_LOC101742089_[Bombyx_mori]
FPKM:2.20 TPM:1.14
3801 A_BomoMSG_c1407_g1_i1
206bp
FPKM:1.01 TPM:0.52
3802 A_BomoMSG_c14080_g1_i1
440bp
 nucleocapsid_[Mothra_bunyavirus]
FPKM:2.27 TPM:1.18
3803 A_BomoMSG_c14081_g1_i1
248bp
FPKM:13.93 TPM:7.24
3804 A_BomoMSG_c14082_g1_i1
671bp
 39S_ribosomal_protein_L50,_mitochondrial_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005739 C mitochondrion
GO:0005840 C ribosome
GO:0008150 P biological_process
GO:0030529 C ribonucleoprotein complex
FPKM:30.45 TPM:15.84
3805 A_BomoMSG_c14083_g1_i1
349bp
FPKM:2.71 TPM:1.41
3806 A_BomoMSG_c14084_g1_i1
218bp
FPKM:4.25 TPM:2.21
3807 A_BomoMSG_c14085_g1_i1
400bp
 saccharopine_dehydrogenase-like_oxidoreductase_isoform_X4_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0005811 C lipid droplet
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0030496 C midbody
GO:0055114 P obsolete oxidation-reduction process
FPKM:2.40 TPM:1.25
3808 A_BomoMSG_c14086_g1_i1
264bp
FPKM:5.75 TPM:2.99
3809 A_BomoMSG_c14086_g2_i1
283bp
FPKM:5.85 TPM:3.04
3810 A_BomoMSG_c14087_g1_i1
495bp
 trafficking_protein_particle_complex_subunit_2-like_protein_[Bombyx_mori]
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0016192 P vesicle-mediated transport
GO:0043231 C intracellular membrane-bounded organelle
GO:0048471 C perinuclear region of cytoplasm
FPKM:35.69 TPM:18.56
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