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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
3691 A_BomoMSG_c13980_g1_i1
1016bp
 tetratricopeptide_repeat_protein_1_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005778 C peroxisomal membrane
FPKM:28.82 TPM:14.99
3692 A_BomoMSG_c13980_g1_i2
581bp
 tetratricopeptide_repeat_protein_1_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005778 C peroxisomal membrane
GO:0006457 P protein folding
GO:0051082 F unfolded protein binding
FPKM:0.00 TPM:0.00
3693 A_BomoMSG_c13981_g1_i1
710bp
 FUN14_domain-containing_protein_1_isoform_X1_[Bombyx_mori]
GO:0000422 P autophagy of mitochondrion
GO:0001666 P response to hypoxia
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0006914 P autophagy
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031307 C integral component of mitochondrial outer membrane
FPKM:20.94 TPM:10.89
3694 A_BomoMSG_c13981_g1_i2
509bp
 FUN14_domain-containing_protein_1A_isoform_X2_[Bombyx_mori]
GO:0000422 P autophagy of mitochondrion
GO:0001666 P response to hypoxia
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0006914 P autophagy
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031307 C integral component of mitochondrial outer membrane
FPKM:73.22 TPM:38.09
3695 A_BomoMSG_c13982_g1_i1
505bp
FPKM:1.86 TPM:0.97
3696 A_BomoMSG_c13983_g1_i1
877bp
 oxysterol-binding_protein-related_protein_9_[Bombyx_mori]
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0008289 F lipid binding
FPKM:5.02 TPM:2.61
3697 A_BomoMSG_c13984_g1_i1
309bp
 quinone_oxidoreductase_[Bombyx_mori]
FPKM:3.39 TPM:1.76
3698 A_BomoMSG_c13985_g1_i1
857bp
FPKM:4.40 TPM:2.29
3699 A_BomoMSG_c13986_g1_i1
396bp
FPKM:5.12 TPM:2.66
3700 A_BomoMSG_c13987_g1_i1
397bp
 zinc_finger_protein_205_isoform_X4_[Bombyx_mori]
FPKM:4.61 TPM:2.40
3701 A_BomoMSG_c13988_g1_i1
684bp
 tetratricopeptide_repeat_protein_39B_isoform_X1_[Bombyx_mori]
FPKM:1.68 TPM:0.88
3702 A_BomoMSG_c13989_g1_i1
715bp
 60S_ribosome_subunit_biogenesis_protein_NIP7_homolog_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0042254 P ribosome biogenesis
GO:0042255 P ribosome assembly
FPKM:2.33 TPM:1.21
3703 A_BomoMSG_c13989_g1_i2
649bp
 60S_ribosome_subunit_biogenesis_protein_NIP7_homolog_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0042254 P ribosome biogenesis
GO:0042255 P ribosome assembly
FPKM:40.33 TPM:20.98
3704 A_BomoMSG_c13991_g1_i1
454bp
FPKM:6.31 TPM:3.28
3705 A_BomoMSG_c13992_g1_i1
296bp
FPKM:4.92 TPM:2.56
3706 A_BomoMSG_c13993_g1_i1
452bp
FPKM:2.18 TPM:1.14
3707 A_BomoMSG_c13994_g1_i1
412bp
FPKM:4.35 TPM:2.26
3708 A_BomoMSG_c13995_g1_i1
340bp
 glycosyltransferase_precursor_[Bombyx_mori]
GO:0001744 P insect visual primordium formation
GO:0005737 C cytoplasm
GO:0005887 C integral component of plasma membrane
GO:0006688 P glycosphingolipid biosynthetic process
GO:0007275 P multicellular organism development
GO:0007281 P germ cell development
GO:0007293 P germarium-derived egg chamber formation
GO:0007298 P border follicle cell migration
GO:0007299 P ovarian follicle cell-cell adhesion
GO:0007411 P axon guidance
GO:0008049 P male courtship behavior
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016325 P oocyte microtubule cytoskeleton organization
GO:0016333 P morphogenesis of follicular epithelium
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0019187 F beta-1,4-mannosyltransferase activity
GO:0030707 P ovarian follicle cell development
GO:0030720 P oocyte localization involved in germarium-derived egg chamber formation
GO:0033227 P dsRNA transport
GO:0042248 P maintenance of polarity of follicular epithelium
GO:0045165 P cell fate commitment
GO:0045434 P negative regulation of female receptivity, post-mating
GO:0046662 P regulation of oviposition
GO:0048477 P oogenesis
GO:0048935 P peripheral nervous system neuron development
GO:0097502 P mannosylation
FPKM:3.79 TPM:1.97
3709 A_BomoMSG_c13995_g2_i1
567bp
 glycosyltransferase_precursor_[Bombyx_mori]
GO:0001744 P insect visual primordium formation
GO:0005737 C cytoplasm
GO:0005887 C integral component of plasma membrane
GO:0006688 P glycosphingolipid biosynthetic process
GO:0007275 P multicellular organism development
GO:0007281 P germ cell development
GO:0007293 P germarium-derived egg chamber formation
GO:0007298 P border follicle cell migration
GO:0007299 P ovarian follicle cell-cell adhesion
GO:0007411 P axon guidance
GO:0008049 P male courtship behavior
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016325 P oocyte microtubule cytoskeleton organization
GO:0016333 P morphogenesis of follicular epithelium
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0019187 F beta-1,4-mannosyltransferase activity
GO:0030707 P ovarian follicle cell development
GO:0030720 P oocyte localization involved in germarium-derived egg chamber formation
GO:0033227 P dsRNA transport
GO:0042248 P maintenance of polarity of follicular epithelium
GO:0045165 P cell fate commitment
GO:0045434 P negative regulation of female receptivity, post-mating
GO:0046662 P regulation of oviposition
GO:0048477 P oogenesis
GO:0048935 P peripheral nervous system neuron development
GO:0097502 P mannosylation
FPKM:2.44 TPM:1.27
3710 A_BomoMSG_c13996_g1_i1
609bp
 WD_repeat-containing_protein_7-like_isoform_X2_[Bombyx_mori]
GO:0002244 P hematopoietic progenitor cell differentiation
GO:0005737 C cytoplasm
GO:0008021 C synaptic vesicle
FPKM:0.00 TPM:0.00
3711 A_BomoMSG_c13996_g1_i2
737bp
 WD_repeat-containing_protein_7-like_isoform_X2_[Bombyx_mori]
GO:0002244 P hematopoietic progenitor cell differentiation
GO:0005737 C cytoplasm
GO:0008021 C synaptic vesicle
FPKM:3.37 TPM:1.75
3712 A_BomoMSG_c13997_g1_i1
455bp
FPKM:3.14 TPM:1.64
3713 A_BomoMSG_c13998_g1_i1
384bp
 UHRF1-binding_protein_1-like_[Bombyx_mori]
FPKM:2.82 TPM:1.47
3714 A_BomoMSG_c1399_g1_i1
358bp
FPKM:3.75 TPM:1.95
3715 A_BomoMSG_c139_g1_i1
217bp
 probable_galactose-1-phosphate_uridylyltransferase_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0005534 F galactose binding
GO:0005536 F glucose binding
GO:0005794 C Golgi apparatus
GO:0005975 P carbohydrate metabolic process
GO:0006012 P galactose metabolic process
GO:0006258 P UDP-glucose catabolic process
GO:0008108 F UDP-glucose:hexose-1-phosphate uridylyltransferase activity
GO:0008270 F zinc ion binding
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0046872 F metal ion binding
FPKM:2.58 TPM:1.34
3716 A_BomoMSG_c14000_g1_i1
217bp
 bromodomain_adjacent_to_zinc_finger_domain_protein_1A_[Bombyx_mori]
GO:0004402 F histone acetyltransferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006261 P DNA-dependent DNA replication
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0008623 C CHRAC
GO:0016590 C ACF complex
GO:0046872 F metal ion binding
FPKM:3.45 TPM:1.79
3717 A_BomoMSG_c14001_g1_i1
1615bp
 peptidyl-tRNA_hydrolase_2,_mitochondrial_[Bombyx_mori]
GO:0004045 F aminoacyl-tRNA hydrolase activity
GO:0005739 C mitochondrion
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
FPKM:23.33 TPM:12.14
3718 A_BomoMSG_c14002_g1_i1
395bp
FPKM:3.18 TPM:1.65
3719 A_BomoMSG_c14003_g1_i1
446bp
 PREDICTED:_putative_nuclease_HARBI1_[Dendroctonus_ponderosae]
GO:0004518 F nuclease activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:5.87 TPM:3.05
3720 A_BomoMSG_c14004_g1_i1
716bp
 calpain-7_isoform_X1_[Bombyx_mori]
GO:0004175 F endopeptidase activity
GO:0004198 F calcium-dependent cysteine-type endopeptidase activity
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0010634 P positive regulation of epithelial cell migration
GO:0016787 F hydrolase activity
GO:0070062 C extracellular exosome
GO:0090541 F MIT domain binding
GO:0097264 P self proteolysis
FPKM:5.18 TPM:2.70
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