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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
3421 A_BomoMSG_c13729_g1_i2
974bp
 leucine-zipper-like_transcriptional_regulator_1_[Bombyx_mori]
GO:0005794 C Golgi apparatus
FPKM:1.94 TPM:1.01
3422 A_BomoMSG_c1372_g1_i1
564bp
FPKM:5.35 TPM:2.79
3423 A_BomoMSG_c13730_g1_i1
532bp
 uncharacterized_protein_LOC101736596_[Bombyx_mori]
FPKM:1.88 TPM:0.98
3424 A_BomoMSG_c13731_g1_i1
766bp
FPKM:18.47 TPM:9.61
3425 A_BomoMSG_c13732_g1_i1
673bp
FPKM:25.42 TPM:13.23
3426 A_BomoMSG_c13733_g1_i1
217bp
FPKM:0.86 TPM:0.45
3427 A_BomoMSG_c13736_g1_i1
1076bp
 BRCA2-interacting_transcriptional_repressor_EMSY_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0006281 P DNA repair
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0016568 P chromatin organization
FPKM:3.10 TPM:1.61
3428 A_BomoMSG_c13737_g1_i1
688bp
 probable_tRNA_pseudouridine_synthase_2_[Bombyx_mori]
GO:0001522 P pseudouridine synthesis
GO:0003723 F RNA binding
GO:0006396 P RNA processing
GO:0008033 P tRNA processing
GO:0009451 P RNA modification
GO:0009982 F pseudouridine synthase activity
GO:0016853 F isomerase activity
FPKM:5.23 TPM:2.72
3429 A_BomoMSG_c13738_g1_i1
304bp
FPKM:5.06 TPM:2.63
3430 A_BomoMSG_c13739_g1_i1
468bp
 uncharacterized_protein_LOC101736443_[Bombyx_mori]
FPKM:2.45 TPM:1.27
3431 A_BomoMSG_c1373_g1_i1
440bp
 uncharacterized_protein_LOC101740721_[Bombyx_mori]
FPKM:2.27 TPM:1.18
3432 A_BomoMSG_c13741_g1_i1
240bp
FPKM:6.57 TPM:3.42
3433 A_BomoMSG_c13742_g1_i1
629bp
FPKM:3.50 TPM:1.82
3434 A_BomoMSG_c13743_g1_i1
568bp
 GRIP_and_coiled-coil_domain-containing_protein_2_[Bombyx_mori]
FPKM:4.16 TPM:2.16
3435 A_BomoMSG_c13744_g1_i1
359bp
FPKM:4.02 TPM:2.09
3436 A_BomoMSG_c13745_g1_i1
3170bp
 hemocyte_protein-glutamine_gamma-glutamyltransferase_[Bombyx_mori]
GO:0003810 F protein-glutamine gamma-glutamyltransferase activity
GO:0016020 C membrane
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0018149 P peptide cross-linking
GO:0046872 F metal ion binding
FPKM:41.48 TPM:21.58
3437 A_BomoMSG_c13746_g1_i1
1305bp
 N-acetyltransferase_[Bombyx_mori]
GO:0004402 F histone acetyltransferase activity
GO:0004596 F peptide alpha-N-acetyltransferase activity
GO:0005737 C cytoplasm
GO:0006474 P N-terminal protein amino acid acetylation
GO:0007049 P cell cycle
GO:0007064 P mitotic sister chromatid cohesion
GO:0007067 P mitotic cell cycle
GO:0008080 F N-acetyltransferase activity
GO:0008280 C cohesin complex
GO:0016573 P histone acetylation
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0031248 C protein acetyltransferase complex
GO:0046331 P lateral inhibition
GO:0048812 P neuron projection morphogenesis
FPKM:19.74 TPM:10.27
3438 A_BomoMSG_c13747_g1_i1
842bp
 elongation_factor_1-beta'_[Bombyx_mori]
GO:0003746 F translation elongation factor activity
GO:0005853 C eukaryotic translation elongation factor 1 complex
GO:0006412 P translation
GO:0006414 P translational elongation
FPKM:1438.69 TPM:748.44
3439 A_BomoMSG_c13748_g1_i1
496bp
 E3_ubiquitin-protein_ligase_RNF19B-like_[Helicoverpa_armigera]
GO:0000151 C ubiquitin ligase complex
GO:0000209 P protein polyubiquitination
GO:0004842 F ubiquitin-protein transferase activity
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0031624 F ubiquitin conjugating enzyme binding
GO:0032436 P positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
FPKM:2.42 TPM:1.26
3440 A_BomoMSG_c13750_g1_i1
1646bp
 proline_dehydrogenase_1,_mitochondrial_isoform_X1_[Bombyx_mori]
GO:0004657 F proline dehydrogenase activity
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006537 P glutamate biosynthetic process
GO:0006560 P proline metabolic process
GO:0006562 P proline catabolic process
GO:0007626 P locomotory behavior
GO:0010133 P proline catabolic process to glutamate
GO:0016491 F oxidoreductase activity
GO:0042331 P phototaxis
GO:0055114 P obsolete oxidation-reduction process
GO:0071949 F FAD binding
FPKM:3.48 TPM:1.81
3441 A_BomoMSG_c13750_g1_i2
2561bp
 proline_dehydrogenase_1,_mitochondrial_isoform_X1_[Bombyx_mori]
GO:0004657 F proline dehydrogenase activity
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006537 P glutamate biosynthetic process
GO:0006560 P proline metabolic process
GO:0006562 P proline catabolic process
GO:0007626 P locomotory behavior
GO:0010133 P proline catabolic process to glutamate
GO:0016491 F oxidoreductase activity
GO:0042331 P phototaxis
GO:0055114 P obsolete oxidation-reduction process
GO:0071949 F FAD binding
FPKM:6.61 TPM:3.44
3442 A_BomoMSG_c13750_g1_i3
2534bp
 proline_dehydrogenase_1,_mitochondrial_isoform_X2_[Bombyx_mori]
GO:0004657 F proline dehydrogenase activity
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006537 P glutamate biosynthetic process
GO:0006560 P proline metabolic process
GO:0006562 P proline catabolic process
GO:0007626 P locomotory behavior
GO:0010133 P proline catabolic process to glutamate
GO:0016491 F oxidoreductase activity
GO:0042331 P phototaxis
GO:0055114 P obsolete oxidation-reduction process
GO:0071949 F FAD binding
FPKM:26.59 TPM:13.83
3443 A_BomoMSG_c13751_g1_i1
486bp
FPKM:3.92 TPM:2.04
3444 A_BomoMSG_c13752_g1_i1
3707bp
 beta-glucuronidase_[Bombyx_mori]
GO:0004553 F hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004566 F beta-glucuronidase activity
GO:0005102 F signaling receptor binding
GO:0005615 C extracellular space
GO:0005764 C lysosome
GO:0005783 C endoplasmic reticulum
GO:0005975 P carbohydrate metabolic process
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0019904 F protein domain specific binding
GO:0043231 C intracellular membrane-bounded organelle
GO:0070062 C extracellular exosome
FPKM:136.27 TPM:70.89
3445 A_BomoMSG_c13753_g1_i1
351bp
FPKM:2.98 TPM:1.55
3446 A_BomoMSG_c13753_g2_i1
222bp
FPKM:0.81 TPM:0.42
3447 A_BomoMSG_c13755_g1_i1
465bp
FPKM:1.52 TPM:0.79
3448 A_BomoMSG_c13757_g1_i1
318bp
FPKM:37.81 TPM:19.67
3449 A_BomoMSG_c13757_g2_i1
261bp
FPKM:16.11 TPM:8.38
3450 A_BomoMSG_c13759_g1_i1
1374bp
 mitotic_checkpoint_protein_BUB3_[Bombyx_mori]
GO:0000070 P mitotic sister chromatid segregation
GO:0000775 C chromosome, centromeric region
GO:0000776 C kinetochore
GO:0000777 C kinetochore
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0007049 P cell cycle
GO:0007059 P chromosome segregation
GO:0007067 P mitotic cell cycle
GO:0007094 P mitotic spindle assembly checkpoint signaling
GO:0008608 P attachment of spindle microtubules to kinetochore
GO:0033597 C mitotic checkpoint complex
GO:0043130 F ubiquitin binding
GO:0051301 P cell division
GO:0051321 P meiotic cell cycle
GO:0051983 P regulation of chromosome segregation
GO:0071173 P spindle assembly checkpoint signaling
GO:1990298 C bub1-bub3 complex
FPKM:18.05 TPM:9.39
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