SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c13748_g1_i1
Scaffold_idBomo_Chr6
NCBI non-redundant
(nr)		E3_ubiquitin-protein_ligase_RNF19B-like_[Helicoverpa_armigera]
Ontology
GO:0000151 C ubiquitin ligase complex
GO:0000209 P protein polyubiquitination
GO:0004842 F ubiquitin-protein transferase activity
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0031624 F ubiquitin conjugating enzyme binding
GO:0032436 P positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
Transcript
Level		FPKM:2.42 TPM:1.26
ORF EntryO_BomoMSG3504_internal:A_BomoMSG_c13748_g1_i1
Sequence
(Nucleotide)
CGCGATGGTGTCCAGCACCCGATTGCAGTTTCGCTGTAGTGGCAACAGGTTGCGCTTCGT
GTCCGAAGCTGACCTGCCTGGCGCCCGGCTGCGGGGCGTCCTTCTGTTACCACTGCAAGG
CGGCGTGGCATCCTACCCAGACCTGCGACGCGGCTAGACGCAGTCGGCAGCCTCCCCCCA
GAGCGCCGCCGCCGACACACCCCGATATTGACCAGGGAGAAGTGAAGCCGTGTCCCCGTT
GCTCGGTGCTGATCGTGAAGGTGGAGGACGGCTCTTGCAACCACATGGTCTGCTGCGTGT
GCGGCGCCGAGTTCTGTTGGCTCTGCATGAAGGAGGTCTCGGACTTGCATTATCTCAGTC
CGAGCGGCTGCACGTTTTGGGGCAAAGAACCGTGGTCCCGGAAGAAGAAGTTGCTGTGGC
AGCTCGGGACGCTGGCGGGCGCGCCGCTCGGCATCGCGGTGGTGGCGGGCGTGGCGCTCC
CCGCGCTGCTGGTGGG
(496 bp)

- SilkBase 1999-2023 -