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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
3361 A_BomoMSG_c13670_g1_i1
885bp
 solute_carrier_family_46_member_3_isoform_X1_[Bombyx_mori]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0055085 P transmembrane transport
FPKM:2.36 TPM:1.23
3362 A_BomoMSG_c13670_g2_i1
281bp
FPKM:1.83 TPM:0.95
3363 A_BomoMSG_c13671_g1_i1
451bp
FPKM:2.59 TPM:1.35
3364 A_BomoMSG_c13672_g1_i1
500bp
 uncharacterized_protein_LOC101742255_[Bombyx_mori]
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0015129 F lactate transmembrane transporter activity
GO:0015293 F symporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0035879 P plasma membrane lactate transport
GO:0055085 P transmembrane transport
FPKM:3.59 TPM:1.87
3365 A_BomoMSG_c13673_g1_i1
335bp
FPKM:4.54 TPM:2.36
3366 A_BomoMSG_c13674_g1_i1
1272bp
 BTB/POZ_domain-containing_protein_At1g21780_[Bombyx_mori]
GO:0016567 P protein ubiquitination
FPKM:37.73 TPM:19.63
3367 A_BomoMSG_c13675_g1_i1
315bp
FPKM:6.17 TPM:3.21
3368 A_BomoMSG_c13676_g1_i1
271bp
FPKM:0.99 TPM:0.51
3369 A_BomoMSG_c13677_g1_i1
271bp
 uncharacterized_protein_LOC110385079_[Bombyx_mori]
FPKM:1.48 TPM:0.77
3370 A_BomoMSG_c13678_g1_i1
288bp
 nucleotide_excision_repair_protein_[Bombyx_mori]
FPKM:1.30 TPM:0.68
3371 A_BomoMSG_c13679_g1_i1
396bp
FPKM:0.97 TPM:0.51
3372 A_BomoMSG_c13680_g1_i1
553bp
FPKM:4.61 TPM:2.40
3373 A_BomoMSG_c13681_g1_i1
536bp
 diphthine_methyltransferase_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0016787 F hydrolase activity
GO:0017183 P peptidyl-diphthamide biosynthetic process from peptidyl-histidine
GO:0061685 F diphthine methylesterase activity
FPKM:3.57 TPM:1.86
3374 A_BomoMSG_c13684_g1_i1
411bp
FPKM:2.53 TPM:1.31
3375 A_BomoMSG_c13685_g1_i1
557bp
FPKM:4.12 TPM:2.14
3376 A_BomoMSG_c13686_g1_i1
308bp
 putative_Copia_protein_[Danaus_plexippus_plexippus]
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:4.17 TPM:2.17
3377 A_BomoMSG_c13687_g1_i1
1629bp
 WD_repeat-containing_protein_18_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0007275 P multicellular organism development
FPKM:30.62 TPM:15.93
3378 A_BomoMSG_c13688_g1_i1
326bp
 prostatic_acid_phosphatase_[Bombyx_mori]
GO:0001501 P skeletal system development
GO:0001784 F phosphotyrosine residue binding
GO:0003993 F acid phosphatase activity
GO:0004721 F phosphoprotein phosphatase activity
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0006470 P protein dephosphorylation
GO:0007040 P lysosome organization
GO:0010033 P response to organic substance
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0031410 C cytoplasmic vesicle
GO:0043005 C neuron projection
GO:0043202 C lysosomal lumen
GO:0048102 P autophagic cell death
GO:0070062 C extracellular exosome
FPKM:3.75 TPM:1.95
3379 A_BomoMSG_c13689_g1_i1
481bp
FPKM:4.34 TPM:2.26
3380 A_BomoMSG_c1368_g1_i1
417bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_collagen_alpha-1(XII)_chain-like,_partial_[Hippocampus_comes]
FPKM:2.02 TPM:1.05
3381 A_BomoMSG_c13690_g1_i1
510bp
FPKM:3.00 TPM:1.56
3382 A_BomoMSG_c13691_g1_i1
225bp
 tyrosine-protein_phosphatase_Lar_[Helicoverpa_armigera]
GO:0001700 P embryonic development via the syncytial blastoderm
GO:0004721 F phosphoprotein phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0005001 F transmembrane receptor protein tyrosine phosphatase activity
GO:0005515 F protein binding
GO:0005875 C microtubule associated complex
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0006470 P protein dephosphorylation
GO:0007155 P cell adhesion
GO:0007283 P spermatogenesis
GO:0007399 P nervous system development
GO:0007411 P axon guidance
GO:0007412 P axon target recognition
GO:0008045 P motor neuron axon guidance
GO:0008201 F heparin binding
GO:0008360 P regulation of cell shape
GO:0008594 P photoreceptor cell morphogenesis
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0030424 C axon
GO:0031290 P retinal ganglion cell axon guidance
GO:0032093 F SAM domain binding
GO:0035335 P peptidyl-tyrosine dephosphorylation
GO:0045467 P R7 cell development
GO:0048477 P oogenesis
GO:0048675 P axon extension
GO:0048841 P regulation of axon extension involved in axon guidance
GO:0051124 P synaptic assembly at neuromuscular junction
GO:1903386 P negative regulation of homophilic cell adhesion
FPKM:2.33 TPM:1.21
3383 A_BomoMSG_c13692_g1_i1
899bp
FPKM:3.92 TPM:2.04
3384 A_BomoMSG_c13694_g1_i1
565bp
FPKM:2.17 TPM:1.13
3385 A_BomoMSG_c13695_g1_i1
204bp
FPKM:7.26 TPM:3.78
3386 A_BomoMSG_c13696_g1_i1
630bp
FPKM:2.37 TPM:1.23
3387 A_BomoMSG_c13697_g1_i1
318bp
FPKM:3.57 TPM:1.86
3388 A_BomoMSG_c13698_g1_i1
934bp
 coiled-coil_domain-containing_protein_R3HCC1L_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003674 F molecular_function
GO:0008150 P biological_process
GO:0035145 C exon-exon junction complex
FPKM:1.68 TPM:0.87
3389 A_BomoMSG_c13699_g1_i1
506bp
 phospholipase_C_gamma_[Bombyx_mori]
GO:0001701 P in utero embryonic development
GO:0001726 C ruffle
GO:0002223 P stimulatory C-type lectin receptor signaling pathway
GO:0004435 F phosphatidylinositol phospholipase C activity
GO:0004871 F obsolete signal transducer activity
GO:0005168 F neurotrophin TRKA receptor binding
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0005911 C cell-cell junction
GO:0006629 P lipid metabolic process
GO:0007165 P signal transduction
GO:0007173 P epidermal growth factor receptor signaling pathway
GO:0008081 F phosphoric diester hydrolase activity
GO:0008180 C COP9 signalosome
GO:0009395 P phospholipid catabolic process
GO:0010634 P positive regulation of epithelial cell migration
GO:0016042 P lipid catabolic process
GO:0016477 P cell migration
GO:0016787 F hydrolase activity
GO:0019722 P calcium-mediated signaling
GO:0019901 F protein kinase binding
GO:0030027 C lamellipodium
GO:0030971 F receptor tyrosine kinase binding
GO:0035254 F glutamate receptor binding
GO:0035556 P intracellular signal transduction
GO:0042995 C cell projection
GO:0043536 P positive regulation of blood vessel endothelial cell migration
GO:0045766 P positive regulation of angiogenesis
GO:0046872 F metal ion binding
GO:0050852 P T cell receptor signaling pathway
GO:0051281 P positive regulation of release of sequestered calcium ion into cytosol
GO:0071364 P cellular response to epidermal growth factor stimulus
FPKM:1.18 TPM:0.61
3390 A_BomoMSG_c136_g1_i1
310bp
 uncharacterized_protein_LOC101740358_isoform_X3_[Bombyx_mori]
GO:0001525 P angiogenesis
GO:0005102 F signaling receptor binding
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005737 C cytoplasm
GO:0007155 P cell adhesion
GO:0009986 C cell surface
GO:0015630 C microtubule cytoskeleton
GO:0016337 P cell-cell adhesion
GO:0030054 C cell junction
GO:0036458 F hepatocyte growth factor binding
GO:0042325 P regulation of phosphorylation
GO:0042802 F identical protein binding
GO:0045202 C synapse
GO:0048870 P cell motility
GO:0051965 P positive regulation of synapse assembly
GO:0060076 C excitatory synapse
GO:0090050 P positive regulation of cell migration involved in sprouting angiogenesis
GO:0097060 C synaptic membrane
FPKM:4.49 TPM:2.34
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