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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
3301 A_BomoMSG_c13613_g1_i1
411bp
 enoyl-CoA_hydratase_domain-containing_protein_3,_mitochondrial_[Bombyx_mori]
FPKM:6.66 TPM:3.46
3302 A_BomoMSG_c13614_g1_i1
534bp
 uncharacterized_protein_LOC101736183_[Bombyx_mori]
FPKM:2.65 TPM:1.38
3303 A_BomoMSG_c13615_g1_i1
398bp
FPKM:5.08 TPM:2.64
3304 A_BomoMSG_c13616_g1_i1
748bp
 WD_repeat-containing_protein_44_[Bombyx_mori]
FPKM:5.11 TPM:2.66
3305 A_BomoMSG_c13617_g1_i1
299bp
 PREDICTED:_putative_nuclease_HARBI1_[Acyrthosiphon_pisum]
FPKM:3.44 TPM:1.79
3306 A_BomoMSG_c13617_g1_i2
208bp
 uncharacterized_protein_LOC107445443_[Parasteatoda_tepidariorum]
FPKM:3.37 TPM:1.75
3307 A_BomoMSG_c13618_g1_i1
415bp
FPKM:3.17 TPM:1.65
3308 A_BomoMSG_c13621_g1_i1
328bp
FPKM:16.84 TPM:8.76
3309 A_BomoMSG_c13622_g1_i1
742bp
FPKM:48.43 TPM:25.19
3310 A_BomoMSG_c13623_g1_i1
202bp
 integrase-like_protein,_partial_[Bombyx_mori]
FPKM:3.21 TPM:1.67
3311 A_BomoMSG_c13623_g2_i1
335bp
 uncharacterized_protein_LOC101737233_[Bombyx_mori]
FPKM:3.56 TPM:1.85
3312 A_BomoMSG_c13624_g1_i1
660bp
FPKM:1.88 TPM:0.98
3313 A_BomoMSG_c13627_g1_i1
525bp
 uncharacterized_protein_LOC101736794_isoform_X1_[Bombyx_mori]
GO:0004523 F RNA-DNA hybrid ribonuclease activity
GO:0005634 C nucleus
GO:0006401 P RNA catabolic process
GO:0032299 C ribonuclease H2 complex
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
FPKM:32.27 TPM:16.79
3314 A_BomoMSG_c13628_g1_i1
318bp
FPKM:12.84 TPM:6.68
3315 A_BomoMSG_c13629_g1_i1
426bp
 stAR-related_lipid_transfer_protein_7,_mitochondrial_isoform_X3_[Bombyx_mori]
FPKM:3.04 TPM:1.58
3316 A_BomoMSG_c1362_g1_i1
594bp
 GTPase-activating_protein_isoform_X2_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0005737 C cytoplasm
GO:0007165 P signal transduction
GO:0031235 C intrinsic component of the cytoplasmic side of the plasma membrane
GO:0035556 P intracellular signal transduction
GO:0043087 P regulation of GTPase activity
GO:0043547 P positive regulation of GTPase activity
GO:0046580 P negative regulation of Ras protein signal transduction
GO:0046872 F metal ion binding
FPKM:2.02 TPM:1.05
3317 A_BomoMSG_c13630_g1_i1
377bp
 FAST_kinase_domain-containing_protein_3,_mitochondrial_[Bombyx_mori]
FPKM:0.79 TPM:0.41
3318 A_BomoMSG_c13631_g1_i1
461bp
 ephrin_type-B_receptor_1-B_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004714 F transmembrane receptor protein tyrosine kinase activity
GO:0005003 F ephrin receptor activity
GO:0005004 F GPI-linked ephrin receptor activity
GO:0005524 F ATP binding
GO:0005769 C early endosome
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006468 P protein phosphorylation
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0010717 P regulation of epithelial to mesenchymal transition
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016477 P cell migration
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0032956 P regulation of actin cytoskeleton organization
GO:0043087 P regulation of GTPase activity
GO:0048013 P ephrin receptor signaling pathway
GO:0051893 P regulation of focal adhesion assembly
GO:0070507 P regulation of microtubule cytoskeleton organization
GO:0097155 P fasciculation of sensory neuron axon
GO:0097156 P fasciculation of motor neuron axon
FPKM:6.17 TPM:3.21
3319 A_BomoMSG_c13633_g1_i1
401bp
FPKM:3.34 TPM:1.74
3320 A_BomoMSG_c13635_g1_i1
1516bp
 lactoylglutathione_lyase_[Bombyx_mori]
GO:0004462 F lactoylglutathione lyase activity
GO:0005975 P carbohydrate metabolic process
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006749 P glutathione metabolic process
GO:0008270 F zinc ion binding
GO:0009438 P methylglyoxal metabolic process
GO:0016829 F lyase activity
GO:0030316 P osteoclast differentiation
GO:0043066 P negative regulation of apoptotic process
GO:0046872 F metal ion binding
GO:0070062 C extracellular exosome
FPKM:13.09 TPM:6.81
3321 A_BomoMSG_c13635_g1_i2
1415bp
 lactoylglutathione_lyase_[Bombyx_mori]
GO:0004462 F lactoylglutathione lyase activity
GO:0005975 P carbohydrate metabolic process
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006749 P glutathione metabolic process
GO:0008270 F zinc ion binding
GO:0009438 P methylglyoxal metabolic process
GO:0016829 F lyase activity
GO:0030316 P osteoclast differentiation
GO:0043066 P negative regulation of apoptotic process
GO:0046872 F metal ion binding
GO:0070062 C extracellular exosome
FPKM:47.42 TPM:24.67
3322 A_BomoMSG_c13637_g1_i1
406bp
 cytochrome_P450_[Bombyx_mori]
GO:0004497 F monooxygenase activity
GO:0005506 F iron ion binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0016705 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037 F heme binding
GO:0031090 C organelle membrane
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
GO:0070330 F aromatase activity
FPKM:3.98 TPM:2.07
3323 A_BomoMSG_c13638_g1_i1
1056bp
 lysM_and_putative_peptidoglycan-binding_domain-containing_protein_3_isoform_X2_[Bombyx_mori]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:33.25 TPM:17.30
3324 A_BomoMSG_c13638_g1_i2
942bp
 lysM_and_putative_peptidoglycan-binding_domain-containing_protein_3_isoform_X1_[Bombyx_mori]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:1.38 TPM:0.72
3325 A_BomoMSG_c13639_g1_i1
268bp
 uncharacterized_protein_LOC110386690,_partial_[Bombyx_mori]
FPKM:2.53 TPM:1.32
3326 A_BomoMSG_c13639_g2_i1
223bp
 PREDICTED:_uncharacterized_protein_K02A2.6-like_[Amyelois_transitella]
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:1.59 TPM:0.83
3327 A_BomoMSG_c13639_g3_i1
300bp
 PREDICTED:_uncharacterized_protein_K02A2.6-like_[Amyelois_transitella]
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:4.39 TPM:2.28
3328 A_BomoMSG_c1363_g1_i1
299bp
 glycerophosphoryl_diester_phosphodiesterase_precursor_[Bombyx_mori]
GO:0006071 P glycerol metabolic process
GO:0006629 P lipid metabolic process
GO:0008081 F phosphoric diester hydrolase activity
GO:0008889 F glycerophosphodiester phosphodiesterase activity
GO:0009279 C cell outer membrane
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
FPKM:6.83 TPM:3.55
3329 A_BomoMSG_c13640_g1_i1
393bp
 uncharacterized_protein_LOC110380621_[Helicoverpa_armigera]
FPKM:2.47 TPM:1.28
3330 A_BomoMSG_c13641_g1_i1
304bp
FPKM:6.61 TPM:3.44
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