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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
3031 A_BomoMSG_c1333_g1_i2
235bp
 C-Cbl-associated_protein_isoform_A_[Operophtera_brumata]
FPKM:0.00 TPM:0.00
3032 A_BomoMSG_c13340_g1_i1
204bp
FPKM:3.11 TPM:1.62
3033 A_BomoMSG_c13342_g1_i1
522bp
 zinc_finger_protein_Xfin_isoform_X2_[Bombyx_mori]
FPKM:2.42 TPM:1.26
3034 A_BomoMSG_c13343_g1_i1
974bp
 uncharacterized_protein_LOC101740406_[Bombyx_mori]
FPKM:3.92 TPM:2.04
3035 A_BomoMSG_c13344_g1_i1
816bp
 death_related_ced-3/Nedd2-like_protein_[Bombyx_mori]
GO:0002230 P positive regulation of defense response to virus by host
GO:0002376 P immune system process
GO:0004175 F endopeptidase activity
GO:0004197 F cysteine-type endopeptidase activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0006915 P apoptotic process
GO:0006919 P activation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0006952 P defense response
GO:0006955 P immune response
GO:0006963 P positive regulation of antibacterial peptide biosynthetic process
GO:0006964 P positive regulation of biosynthetic process of antibacterial peptides active against Gram-negative bacteria
GO:0007291 P sperm individualization
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0008656 F cysteine-type endopeptidase activator activity involved in apoptotic process
GO:0016485 P protein processing
GO:0016787 F hydrolase activity
GO:0043069 P negative regulation of programmed cell death
GO:0045087 P innate immune response
GO:0045089 P positive regulation of innate immune response
GO:0048935 P peripheral nervous system neuron development
GO:0050829 P defense response to Gram-negative bacterium
GO:0061057 P peptidoglycan recognition protein signaling pathway
GO:0097194 P execution phase of apoptosis
GO:0097200 F cysteine-type endopeptidase activity involved in execution phase of apoptosis
FPKM:5.31 TPM:2.76
3036 A_BomoMSG_c13345_g1_i1
436bp
FPKM:2.74 TPM:1.42
3037 A_BomoMSG_c13347_g1_i1
355bp
 integral_membrane_protein_GPR155_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005622 C intracellular anatomical structure
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0035556 P intracellular signal transduction
GO:0050890 P cognition
GO:0055085 P transmembrane transport
GO:0070062 C extracellular exosome
FPKM:4.97 TPM:2.59
3038 A_BomoMSG_c13348_g1_i1
406bp
FPKM:4.45 TPM:2.31
3039 A_BomoMSG_c13349_g1_i1
768bp
 membrane-bound_transcription_factor_site-1_protease,_partial_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0004175 F endopeptidase activity
GO:0004252 F serine-type endopeptidase activity
GO:0005783 C endoplasmic reticulum
GO:0005788 C endoplasmic reticulum lumen
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0005795 C Golgi stack
GO:0006508 P proteolysis
GO:0006629 P lipid metabolic process
GO:0007040 P lysosome organization
GO:0008202 P steroid metabolic process
GO:0008203 P cholesterol metabolic process
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0031293 P membrane protein intracellular domain proteolysis
GO:0034976 P response to endoplasmic reticulum stress
GO:0036500 P ATF6-mediated unfolded protein response
GO:0042990 P obsolete regulation of transcription factor import into nucleus
FPKM:2.71 TPM:1.41
3040 A_BomoMSG_c13350_g1_i1
372bp
 uncharacterized_protein_LOC101741655_isoform_X2_[Bombyx_mori]
FPKM:1.89 TPM:0.98
3041 A_BomoMSG_c13351_g1_i1
365bp
 transmembrane_protein_198_[Bombyx_mori]
FPKM:2.23 TPM:1.16
3042 A_BomoMSG_c13353_g1_i1
250bp
 uncharacterized_protein_LOC101737032_[Bombyx_mori]
FPKM:1.78 TPM:0.93
3043 A_BomoMSG_c13354_g1_i1
514bp
FPKM:3.95 TPM:2.06
3044 A_BomoMSG_c13355_g1_i1
246bp
FPKM:1.85 TPM:0.96
3045 A_BomoMSG_c13356_g1_i1
242bp
 leucine-rich_PPR_motif-containing_protein,_mitochondrial_[Bombyx_mori]
FPKM:11.57 TPM:6.02
3046 A_BomoMSG_c13357_g1_i1
331bp
 ORF2_[Bombyx_mori]
FPKM:3.97 TPM:2.07
3047 A_BomoMSG_c13358_g1_i1
334bp
FPKM:2.61 TPM:1.36
3048 A_BomoMSG_c13359_g1_i1
278bp
FPKM:1.87 TPM:0.97
3049 A_BomoMSG_c13360_g1_i1
773bp
FPKM:3.17 TPM:1.65
3050 A_BomoMSG_c13364_g1_i1
888bp
 LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101737263_[Bombyx_mori]
FPKM:2.52 TPM:1.31
3051 A_BomoMSG_c13365_g1_i1
211bp
FPKM:8.42 TPM:4.38
3052 A_BomoMSG_c13366_g1_i1
302bp
 PREDICTED:_uncharacterized_protein_LOC103308837_[Acyrthosiphon_pisum]
FPKM:3.15 TPM:1.64
3053 A_BomoMSG_c13369_g1_i1
317bp
 DNA_N6-methyl_adenine_demethylase_isoform_X2_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0007281 P germ cell development
GO:0008270 F zinc ion binding
GO:0016491 F oxidoreductase activity
GO:0035511 P oxidative DNA demethylation
GO:0035514 F DNA demethylase activity
GO:0035516 F oxidative DNA demethylase activity
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0051213 F dioxygenase activity
GO:0055114 P obsolete oxidation-reduction process
GO:1901537 P positive regulation of DNA demethylation
FPKM:3.59 TPM:1.87
3054 A_BomoMSG_c13370_g1_i1
314bp
 uncharacterized_protein_LOC101743652_[Bombyx_mori]
FPKM:2.19 TPM:1.14
3055 A_BomoMSG_c13373_g1_i1
607bp
 transmembrane_7_superfamily_member_3_isoform_X2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005886 C plasma membrane
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0070062 C extracellular exosome
FPKM:1.84 TPM:0.95
3056 A_BomoMSG_c13376_g1_i1
357bp
FPKM:1.74 TPM:0.90
3057 A_BomoMSG_c13377_g1_i1
269bp
 uncharacterized_protein_LOC101743769_isoform_X2_[Bombyx_mori]
GO:0001726 C ruffle
GO:0005509 F calcium ion binding
GO:0005544 F calcium-dependent phospholipid binding
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005938 C cell cortex
GO:0006810 P transport
GO:0008289 F lipid binding
GO:0010828 P positive regulation of glucose transmembrane transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0030659 C cytoplasmic vesicle membrane
GO:0031340 P positive regulation of vesicle fusion
GO:0031410 C cytoplasmic vesicle
GO:0032587 C ruffle membrane
GO:0032869 P cellular response to insulin stimulus
GO:0038028 P insulin receptor signaling pathway via phosphatidylinositol 3-kinase
GO:0042995 C cell projection
GO:0065002 P intracellular protein transmembrane transport
GO:0090314 P positive regulation of protein targeting to membrane
FPKM:1.51 TPM:0.78
3058 A_BomoMSG_c13378_g1_i1
235bp
FPKM:2.08 TPM:1.08
3059 A_BomoMSG_c13378_g2_i1
346bp
FPKM:1.53 TPM:0.80
3060 A_BomoMSG_c13379_g1_i1
287bp
FPKM:0.87 TPM:0.45
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