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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
3061 A_BomoMSG_c1337_g1_i1
534bp
 coiled-coil_domain-containing_protein_CG32809_isoform_X14_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
FPKM:2.81 TPM:1.46
3062 A_BomoMSG_c13380_g1_i1
242bp
FPKM:2.57 TPM:1.34
3063 A_BomoMSG_c13383_g1_i1
214bp
 uncharacterized_protein_LOC110385446,_partial_[Bombyx_mori]
FPKM:3.59 TPM:1.87
3064 A_BomoMSG_c13384_g1_i1
547bp
 uncharacterized_protein_LOC105842999_[Bombyx_mori]
FPKM:1.41 TPM:0.73
3065 A_BomoMSG_c13384_g1_i2
295bp
 uncharacterized_protein_LOC105842999_[Bombyx_mori]
FPKM:2.75 TPM:1.43
3066 A_BomoMSG_c13386_g1_i1
316bp
FPKM:3.25 TPM:1.69
3067 A_BomoMSG_c13387_g1_i1
209bp
FPKM:21.18 TPM:11.02
3068 A_BomoMSG_c13389_g1_i1
259bp
FPKM:12.02 TPM:6.25
3069 A_BomoMSG_c13390_g1_i1
652bp
 GMP_reductase_1_isoform_X2_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0003920 F GMP reductase activity
GO:0005829 C cytosol
GO:0006144 P purine nucleobase metabolic process
GO:0006163 P purine nucleotide metabolic process
GO:0009117 P nucleotide metabolic process
GO:0009409 P response to cold
GO:0016491 F oxidoreductase activity
GO:0043101 P purine-containing compound salvage
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
GO:1902560 C GMP reductase complex
FPKM:2.03 TPM:1.06
3070 A_BomoMSG_c13391_g1_i1
654bp
FPKM:2.50 TPM:1.30
3071 A_BomoMSG_c13392_g1_i1
618bp
 tetratricopeptide_repeat_protein_5_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:1901796 P regulation of signal transduction by p53 class mediator
FPKM:4.38 TPM:2.28
3072 A_BomoMSG_c13397_g1_i1
415bp
 PPPDE_peptidase_domain-containing_protein_1_[Danaus_plexippus_plexippus]
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0016787 F hydrolase activity
FPKM:2.49 TPM:1.29
3073 A_BomoMSG_c13398_g1_i1
433bp
FPKM:0.00 TPM:0.00
3074 A_BomoMSG_c13398_g1_i2
503bp
FPKM:2.38 TPM:1.24
3075 A_BomoMSG_c13399_g1_i1
201bp
FPKM:2.38 TPM:1.24
3076 A_BomoMSG_c13399_g1_i2
277bp
FPKM:0.85 TPM:0.44
3077 A_BomoMSG_c133_g1_i1
271bp
FPKM:1.97 TPM:1.03
3078 A_BomoMSG_c13400_g1_i1
373bp
FPKM:4.57 TPM:2.38
3079 A_BomoMSG_c13402_g1_i1
288bp
 uncharacterized_protein_LOC101742559_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003714 F transcription corepressor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0043035 F chromatin insulator sequence binding
GO:0043565 F sequence-specific DNA binding
GO:0045746 P negative regulation of Notch signaling pathway
GO:0045892 P negative regulation of transcription, DNA-templated
FPKM:3.47 TPM:1.80
3080 A_BomoMSG_c13405_g1_i1
395bp
 Chain_A,_Sp2-sp3_-_A_Complex_Of_Two_Storage_Proteins_From_Bombyx_Mori_Hemolymph
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0045735 F nutrient reservoir activity
FPKM:2.94 TPM:1.53
3081 A_BomoMSG_c13405_g1_i2
351bp
 Chain_B,_Crystal_Structure_Of_Bombyx_Mori_Sp2/sp3_Heterohexamer
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0045735 F nutrient reservoir activity
FPKM:0.00 TPM:0.00
3082 A_BomoMSG_c13406_g1_i1
242bp
FPKM:3.86 TPM:2.01
3083 A_BomoMSG_c13407_g1_i1
391bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:6.72 TPM:3.49
3084 A_BomoMSG_c13409_g1_i1
402bp
 vascular_endothelial_growth_factor_receptor_1_isoform_X4_[Bombyx_mori]
FPKM:4.52 TPM:2.35
3085 A_BomoMSG_c13409_g2_i1
367bp
 vascular_endothelial_growth_factor_receptor_1_isoform_X2_[Bombyx_mori]
FPKM:1.10 TPM:0.57
3086 A_BomoMSG_c13411_g1_i1
444bp
 Uncharacterized_protein_OBRU01_19782,_partial_[Operophtera_brumata]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
FPKM:2.45 TPM:1.27
3087 A_BomoMSG_c13412_g1_i1
344bp
 Protein_vav_[Papilio_machaon]
GO:0001525 P angiogenesis
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0005154 F epidermal growth factor receptor binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0007264 P small GTPase mediated signal transduction
GO:0008361 P regulation of cell size
GO:0010468 P regulation of gene expression
GO:0016477 P cell migration
GO:0030031 P cell projection assembly
GO:0030032 P lamellipodium assembly
GO:0030168 P platelet activation
GO:0030193 P regulation of blood coagulation
GO:0035023 P regulation of Rho protein signal transduction
GO:0035556 P intracellular signal transduction
GO:0043087 P regulation of GTPase activity
GO:0043547 P positive regulation of GTPase activity
GO:0043552 P positive regulation of phosphatidylinositol 3-kinase activity
GO:0046872 F metal ion binding
FPKM:2.78 TPM:1.45
3088 A_BomoMSG_c13414_g1_i1
383bp
FPKM:3.60 TPM:1.87
3089 A_BomoMSG_c13415_g1_i1
910bp
FPKM:1.65 TPM:0.86
3090 A_BomoMSG_c13416_g1_i1
228bp
FPKM:4.50 TPM:2.34
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