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GO:0003676	F	nucleic acid binding
GO:0003677	F	DNA binding
GO:0003700	F	DNA-binding transcription factor activity
GO:0005515	F	protein binding
GO:0005622	C	intracellular anatomical structure
GO:0005634	C	nucleus
GO:0006351	P	transcription, DNA-templated
GO:0006355	P	regulation of transcription, DNA-templated
GO:0046872	F	metal ion binding

FPKM:6.47 TPM:3.37

3005

A_BomoMSG_c13310_g1_i1

346bp

Bomo_Chr11

FPKM:2.75 TPM:1.43

3006

A_BomoMSG_c13311_g1_i1

283bp

Bomo_Chr15

leucine-rich_repeat-containing_protein_57-like_[Bombyx_mori]

FPKM:12.14 TPM:6.32

3007

A_BomoMSG_c13313_g1_i1

506bp

Bomo_Chr9

vacuolar_protein_sorting-associated_protein_13C_[Bombyx_mori]

GO:0003674	F	molecular_function
GO:0005622	C	intracellular anatomical structure
GO:0006623	P	protein targeting to vacuole
GO:0019898	C	extrinsic component of membrane
GO:0045053	P	protein retention in Golgi apparatus
GO:0070062	C	extracellular exosome
GO:1905090	P	negative regulation of parkin-mediated stimulation of mitophagy in response to mitochondrial depolarization

FPKM:3.03 TPM:1.58

3008

A_BomoMSG_c13315_g1_i1

355bp

Bomo_Chr19

FPKM:2.92 TPM:1.52

3009

A_BomoMSG_c13316_g1_i1

338bp

Bomo_Chr25

uncharacterized_protein_LOC101740264_[Bombyx_mori]

FPKM:3.51 TPM:1.82

3010

A_BomoMSG_c13317_g1_i1

447bp

Bomo_Chr27

membrane-associated_guanylate_kinase,_WW_and_PDZ_domain-containing_protein_3-like_[Bombyx_mori]

GO:0002092	P	positive regulation of receptor internalization
GO:0003094	P	glomerular filtration
GO:0004871	F	obsolete signal transducer activity
GO:0005515	F	protein binding
GO:0005634	C	nucleus
GO:0005737	C	cytoplasm
GO:0005768	C	endosome
GO:0005770	C	late endosome
GO:0005886	C	plasma membrane
GO:0005923	C	bicellular tight junction
GO:0007165	P	signal transduction
GO:0007399	P	nervous system development
GO:0008285	P	negative regulation of cell population proliferation
GO:0010976	P	positive regulation of neuron projection development
GO:0014069	C	postsynaptic density
GO:0016020	C	membrane
GO:0019902	F	phosphatase binding
GO:0030054	C	cell junction
GO:0030159	F	signaling receptor complex adaptor activity
GO:0030336	P	negative regulation of cell migration
GO:0030425	C	dendrite
GO:0031697	F	beta-1 adrenergic receptor binding
GO:0032403	F	protein-containing complex binding
GO:0032516	P	positive regulation of phosphoprotein phosphatase activity
GO:0032926	P	negative regulation of activin receptor signaling pathway
GO:0032947	F	molecular adaptor activity
GO:0036057	C	slit diaphragm
GO:0038180	P	nerve growth factor signaling pathway
GO:0043005	C	neuron projection
GO:0043113	P	receptor clustering
GO:0043234	C	protein-containing complex
GO:0045202	C	synapse
GO:0046332	F	SMAD binding
GO:0048471	C	perinuclear region of cytoplasm
GO:0051291	P	protein heterooligomerization
GO:0051898	P	negative regulation of protein kinase B signaling
GO:0060395	P	SMAD protein signal transduction
GO:0070699	F	type II activin receptor binding
GO:0071850	P	regulation of cell cycle
GO:0072015	P	glomerular visceral epithelial cell development
GO:1990090	P	cellular response to nerve growth factor stimulus

FPKM:4.64 TPM:2.41

3011

A_BomoMSG_c13318_g1_i1

317bp

Bomo_Chr8

FPKM:7.89 TPM:4.11

3012

A_BomoMSG_c1331_g1_i1

227bp

Bomo_Chr12

FPKM:1.52 TPM:0.79

3013

A_BomoMSG_c13320_g1_i1

700bp

Bomo_Chr13

cholinephosphotransferase_1_isoform_X3_[Bombyx_mori]

FPKM:5.66 TPM:2.95

3014

A_BomoMSG_c13322_g1_i1

328bp

Bomo_Chr6

FPKM:3.03 TPM:1.58

3015

A_BomoMSG_c13323_g1_i1

362bp

Bomo_Chr17

FPKM:3.96 TPM:2.06

3016

A_BomoMSG_c13324_g1_i1

204bp

Bomo_Chr9

FPKM:3.11 TPM:1.62

3017

A_BomoMSG_c13326_g1_i1

379bp

Bomo_Chr5

FPKM:4.45 TPM:2.31

3018

A_BomoMSG_c13328_g1_i1

347bp

Bomo_Chr23

FPKM:5.17 TPM:2.69

3019

A_BomoMSG_c13329_g1_i1

316bp

Bomo_Chr9

PREDICTED:_uncharacterized_protein_K02A2.6-like_[Vollenhovia_emeryi]

GO:0003676	F	nucleic acid binding
GO:0003824	F	catalytic activity
GO:0003964	F	RNA-directed DNA polymerase activity
GO:0004190	F	aspartic-type endopeptidase activity
GO:0004518	F	nuclease activity
GO:0004519	F	endonuclease activity
GO:0004523	F	RNA-DNA hybrid ribonuclease activity
GO:0006278	P	RNA-dependent DNA biosynthetic process
GO:0006310	P	DNA recombination
GO:0006508	P	proteolysis
GO:0008152	P	metabolic process
GO:0008233	F	peptidase activity
GO:0015074	P	DNA integration
GO:0016740	F	transferase activity
GO:0016779	F	nucleotidyltransferase activity
GO:0016787	F	hydrolase activity
GO:0046718	P	viral entry into host cell
GO:0075713	P	establishment of integrated proviral latency
GO:0090305	P	nucleic acid phosphodiester bond hydrolysis
GO:0090502	P	RNA phosphodiester bond hydrolysis, endonucleolytic

FPKM:2.53 TPM:1.31

3020

A_BomoMSG_c13330_g1_i1

585bp

Bomo_Chr28

rho_guanine_nucleotide_exchange_factor_18_[Bombyx_mori]

FPKM:2.62 TPM:1.36

3021

A_BomoMSG_c13332_g1_i1

205bp

Bomo_Chr13

PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_isoform_X1_[Papilio_xuthus]

GO:0003964	F	RNA-directed DNA polymerase activity
GO:0006278	P	RNA-dependent DNA biosynthetic process
GO:0008152	P	metabolic process
GO:0016740	F	transferase activity
GO:0016779	F	nucleotidyltransferase activity

FPKM:7.15 TPM:3.72

3022

A_BomoMSG_c13333_g1_i1

215bp

Bomo_Chr17

FPKM:10.62 TPM:5.52

3023

A_BomoMSG_c13334_g1_i1

214bp

Bomo_Chr13

FPKM:8.97 TPM:4.67

3024

A_BomoMSG_c13335_g1_i1

609bp

Bomo_Chr5

LOW_QUALITY_PROTEIN:_neuroblastoma-amplified_sequence_[Bombyx_mori]

GO:0000184	P	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0000956	P	nuclear-transcribed mRNA catabolic process
GO:0005783	C	endoplasmic reticulum
GO:0006810	P	transport
GO:0006890	P	retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
GO:0015031	P	protein transport
GO:0043009	P	chordate embryonic development
GO:2000623	P	negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay