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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
2971 A_BomoMSG_c13273_g1_i1
609bp
FPKM:3.13 TPM:1.63
2972 A_BomoMSG_c13274_g1_i1
433bp
 uncharacterized_protein_LOC101741655_isoform_X1_[Bombyx_mori]
FPKM:1.91 TPM:0.99
2973 A_BomoMSG_c13275_g1_i1
303bp
 GRIP_and_coiled-coil_domain-containing_protein_2_[Bombyx_mori]
FPKM:7.05 TPM:3.67
2974 A_BomoMSG_c13276_g1_i1
610bp
 THAP_domain-containing_protein_2-like_[Bombyx_mori]
FPKM:1.69 TPM:0.88
2975 A_BomoMSG_c13277_g1_i1
231bp
 protein_cramped_[Bombyx_mori]
FPKM:8.70 TPM:4.52
2976 A_BomoMSG_c13278_g1_i1
303bp
 Limpet_protein_[Operophtera_brumata]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001649 P osteoblast differentiation
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005925 C focal adhesion
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0008134 F transcription factor binding
GO:0008270 F zinc ion binding
GO:0009725 P response to hormone
GO:0015629 C actin cytoskeleton
GO:0030018 C Z disc
GO:0031430 C M band
GO:0042802 F identical protein binding
GO:0043066 P negative regulation of apoptotic process
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0055014 P atrial cardiac muscle cell development
GO:0055015 P ventricular cardiac muscle cell development
GO:0060347 P heart trabecula formation
FPKM:3.13 TPM:1.63
2977 A_BomoMSG_c13279_g1_i1
268bp
FPKM:3.04 TPM:1.58
2978 A_BomoMSG_c1327_g1_i1
213bp
FPKM:1.82 TPM:0.95
2979 A_BomoMSG_c13280_g1_i1
322bp
FPKM:5.23 TPM:2.72
2980 A_BomoMSG_c13282_g1_i1
493bp
 nodal_modulator_1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005789 C endoplasmic reticulum membrane
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030246 F carbohydrate binding
FPKM:8.04 TPM:4.18
2981 A_BomoMSG_c13282_g1_i2
285bp
 nodal_modulator_1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005789 C endoplasmic reticulum membrane
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030246 F carbohydrate binding
FPKM:0.00 TPM:0.00
2982 A_BomoMSG_c13283_g1_i1
285bp
FPKM:3.99 TPM:2.07
2983 A_BomoMSG_c13285_g1_i1
813bp
FPKM:1.99 TPM:1.03
2984 A_BomoMSG_c13286_g1_i1
680bp
 hemicentin-1_isoform_X4_[Bombyx_mori]
FPKM:2.71 TPM:1.41
2985 A_BomoMSG_c13287_g1_i1
405bp
FPKM:2.82 TPM:1.47
2986 A_BomoMSG_c13288_g1_i1
815bp
 Uncharacterized_protein_OBRU01_24464_[Operophtera_brumata]
FPKM:3.06 TPM:1.59
2987 A_BomoMSG_c13288_g1_i2
625bp
 Uncharacterized_protein_OBRU01_24464_[Operophtera_brumata]
FPKM:0.00 TPM:0.00
2988 A_BomoMSG_c13289_g1_i1
383bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:8.75 TPM:4.55
2989 A_BomoMSG_c13290_g1_i1
206bp
 hypothetical_protein_[Acinetobacter_baumannii]
FPKM:8.05 TPM:4.19
2990 A_BomoMSG_c13291_g1_i1
280bp
FPKM:8.74 TPM:4.55
2991 A_BomoMSG_c13292_g1_i1
364bp
 PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_isoform_X3_[Papilio_machaon]
FPKM:8.40 TPM:4.37
2992 A_BomoMSG_c13293_g1_i1
376bp
FPKM:15.65 TPM:8.14
2993 A_BomoMSG_c13294_g1_i1
235bp
 ubiquitin-protein_ligase_E3C_[Bombyx_mori]
FPKM:7.62 TPM:3.96
2994 A_BomoMSG_c13295_g1_i1
438bp
FPKM:2.92 TPM:1.52
2995 A_BomoMSG_c13296_g1_i1
704bp
 probable_proline--tRNA_ligase,_mitochondrial_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003723 F RNA binding
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004827 F proline-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006433 P prolyl-tRNA aminoacylation
GO:0016874 F ligase activity
FPKM:2.70 TPM:1.41
2996 A_BomoMSG_c13297_g1_i1
385bp
 protein_kish-A_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005794 C Golgi apparatus
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:14.80 TPM:7.70
2997 A_BomoMSG_c132_g1_i1
283bp
 erythroid_differentiation-related_factor_1_[Bombyx_mori]
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
FPKM:3.15 TPM:1.64
2998 A_BomoMSG_c13300_g1_i1
463bp
 plexin_B_[Danaus_plexippus_plexippus]
GO:0002116 C semaphorin receptor complex
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0007165 P signal transduction
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0007411 P axon guidance
GO:0008045 P motor neuron axon guidance
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0017154 F semaphorin receptor activity
GO:0030154 P cell differentiation
GO:0030334 P regulation of cell migration
GO:0035021 P negative regulation of Rac protein signal transduction
GO:0035025 P positive regulation of Rho protein signal transduction
GO:0048841 P regulation of axon extension involved in axon guidance
GO:0071526 P semaphorin-plexin signaling pathway
GO:0071678 P olfactory bulb axon guidance
GO:0097374 P sensory neuron axon guidance
GO:1902287 P semaphorin-plexin signaling pathway involved in axon guidance
FPKM:4.59 TPM:2.39
2999 A_BomoMSG_c13301_g1_i1
301bp
 PREDICTED:_papilin-like_[Plutella_xylostella]
FPKM:5.16 TPM:2.68
3000 A_BomoMSG_c13302_g1_i1
256bp
FPKM:3.93 TPM:2.04
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