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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
2461 A_BomoMSG_c12738_g1_i1
603bp
 solute_carrier_family_12_member_9_isoform_X2_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0055085 P transmembrane transport
FPKM:3.44 TPM:1.79
2462 A_BomoMSG_c12740_g1_i1
389bp
FPKM:4.26 TPM:2.22
2463 A_BomoMSG_c12741_g1_i1
226bp
 protein_Jumonji_isoform_X2_[Bombyx_mori]
FPKM:5.38 TPM:2.80
2464 A_BomoMSG_c12742_g1_i1
396bp
FPKM:2.92 TPM:1.52
2465 A_BomoMSG_c12743_g1_i1
437bp
FPKM:5.64 TPM:2.93
2466 A_BomoMSG_c12746_g1_i1
259bp
FPKM:2.73 TPM:1.42
2467 A_BomoMSG_c12747_g1_i1
237bp
FPKM:7.46 TPM:3.88
2468 A_BomoMSG_c12748_g1_i1
227bp
FPKM:2.28 TPM:1.19
2469 A_BomoMSG_c12749_g1_i1
255bp
 fringe_[Junonia_coenia]
FPKM:2.83 TPM:1.47
2470 A_BomoMSG_c12750_g1_i1
295bp
FPKM:21.89 TPM:11.39
2471 A_BomoMSG_c12751_g1_i1
418bp
 centromere-associated_protein_E_isoform_X2_[Bombyx_mori]
FPKM:1.85 TPM:0.96
2472 A_BomoMSG_c12751_g1_i2
479bp
 centromere-associated_protein_E_isoform_X2_[Bombyx_mori]
FPKM:1.04 TPM:0.54
2473 A_BomoMSG_c12753_g1_i1
593bp
FPKM:1.76 TPM:0.91
2474 A_BomoMSG_c12754_g1_i1
298bp
 Gag-pol_polyprotein_[Operophtera_brumata]
FPKM:3.64 TPM:1.89
2475 A_BomoMSG_c12755_g1_i1
211bp
FPKM:5.61 TPM:2.92
2476 A_BomoMSG_c12756_g1_i1
252bp
 unconventional_myosin-IXa_isoform_X3_[Bombyx_mori]
GO:0000146 F microfilament motor activity
GO:0000166 F nucleotide binding
GO:0001726 C ruffle
GO:0003774 F cytoskeletal motor activity
GO:0003779 F actin binding
GO:0005096 F GTPase activator activity
GO:0005515 F protein binding
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005884 C actin filament
GO:0005938 C cell cortex
GO:0007165 P signal transduction
GO:0007266 P Rho protein signal transduction
GO:0008152 P metabolic process
GO:0008270 F zinc ion binding
GO:0015629 C actin cytoskeleton
GO:0016020 C membrane
GO:0016459 C myosin complex
GO:0016887 F ATP hydrolysis activity
GO:0017048 F small GTPase binding
GO:0030027 C lamellipodium
GO:0030048 P actin filament-based movement
GO:0030898 F microfilament motor activity
GO:0032011 P ARF protein signal transduction
GO:0035023 P regulation of Rho protein signal transduction
GO:0035385 P Roundabout signaling pathway
GO:0035556 P intracellular signal transduction
GO:0042803 F protein homodimerization activity
GO:0043008 F ATP-dependent protein binding
GO:0043531 F ADP binding
GO:0043547 P positive regulation of GTPase activity
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
GO:0048495 F Roundabout binding
GO:0051015 F actin filament binding
GO:0051056 P regulation of small GTPase mediated signal transduction
FPKM:3.50 TPM:1.82
2477 A_BomoMSG_c12757_g1_i1
592bp
FPKM:1.76 TPM:0.92
2478 A_BomoMSG_c12758_g1_i1
455bp
FPKM:0.00 TPM:0.00
2479 A_BomoMSG_c12758_g1_i2
634bp
FPKM:1.86 TPM:0.97
2480 A_BomoMSG_c12759_g1_i1
326bp
FPKM:4.77 TPM:2.48
2481 A_BomoMSG_c12760_g1_i1
351bp
FPKM:5.37 TPM:2.79
2482 A_BomoMSG_c12761_g1_i1
247bp
FPKM:1.83 TPM:0.95
2483 A_BomoMSG_c12761_g2_i1
261bp
FPKM:1.61 TPM:0.84
2484 A_BomoMSG_c12762_g1_i1
1158bp
 RING_finger_protein_113A_[Bombyx_mori]
GO:0005684 C U2-type spliceosomal complex
GO:0008270 F zinc ion binding
GO:0034247 P snoRNA splicing
GO:0045292 P mRNA cis splicing, via spliceosome
GO:0046872 F metal ion binding
FPKM:35.82 TPM:18.63
2485 A_BomoMSG_c12763_g1_i1
264bp
 PREDICTED:_uncharacterized_protein_LOC106720059_[Papilio_machaon]
GO:0000226 P microtubule cytoskeleton organization
GO:0000922 C spindle pole
GO:0000923 C equatorial microtubule organizing center
GO:0005200 F structural constituent of cytoskeleton
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005816 C spindle pole body
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0007020 P microtubule nucleation
GO:0007126 P meiotic cell cycle
GO:0008017 F microtubule binding
GO:0008274 C gamma-tubulin large complex
GO:0016020 C membrane
GO:0031122 P cytoplasmic microtubule organization
GO:0043015 F gamma-tubulin binding
GO:0051011 F microtubule minus-end binding
GO:0051298 P centrosome duplication
GO:0051415 P microtubule nucleation by interphase microtubule organizing center
GO:0070062 C extracellular exosome
GO:0090063 P positive regulation of microtubule nucleation
GO:0090307 P mitotic spindle assembly
FPKM:4.71 TPM:2.45
2486 A_BomoMSG_c12764_g1_i1
862bp
FPKM:2.93 TPM:1.52
2487 A_BomoMSG_c12765_g1_i1
270bp
FPKM:2.99 TPM:1.55
2488 A_BomoMSG_c12766_g1_i1
310bp
FPKM:6.37 TPM:3.31
2489 A_BomoMSG_c12766_g2_i1
264bp
FPKM:2.17 TPM:1.13
2490 A_BomoMSG_c12766_g2_i2
290bp
FPKM:2.07 TPM:1.08
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